Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g37116 Brassica carinata HOM05D009302 ORTHO05D010480 3.3e-68 261.5 127 100.0
BolC8t47288H Brassica oleracea HOM05D009302 ORTHO05D010480 3.3e-68 261.5 127 100.0
C08p04880 Brassica napus HOM05D009302 ORTHO05D010480 3.7e-64 248.1 141 89.4
BcaB04g17390 Brassica carinata HOM05D009302 ORTHO05D010480 3.8e-56 221.5 127 83.5
BraA08t32482Z Brassica rapa HOM05D009302 ORTHO05D010480 3.8e-56 221.5 127 82.7
BcaC07g37121 Brassica carinata HOM05D009302 ORTHO05D010480 1.1e-55 219.9 127 81.9
BolC8t47296H Brassica oleracea HOM05D009302 ORTHO05D010480 5.4e-55 217.6 127 81.9
Sp1g35660 Schrenkiella parvula HOM05D009302 ORTHO05D010480 1.5e-49 199.5 127 74.0
C08p04920 Brassica napus HOM05D009302 ORTHO05D010480 2.6e-49 198.7 113 82.3
BcaC07g37110 Brassica carinata HOM05D009302 ORTHO05D010480 6.0e-46 187.6 126 73.0
BolC8t47278H Brassica oleracea HOM05D009302 ORTHO05D010480 6.0e-46 187.6 126 73.0
BraA08t32476Z Brassica rapa HOM05D009302 ORTHO05D010480 1.7e-45 186.0 126 71.4
A08p04490 Brassica napus HOM05D009302 ORTHO05D010480 5.1e-45 184.5 126 71.4
C08p04790 Brassica napus HOM05D009302 ORTHO05D010480 5.1e-45 184.5 126 72.2
BcaB04g17388 Brassica carinata HOM05D009302 ORTHO05D010480 3.3e-44 181.8 126 70.6
Thhalv10011863m.g Eutrema salsugineum HOM05D009302 ORTHO05D010480 9.6e-44 180.3 127 71.7
A08p04540 Brassica napus HOM05D009302 ORTHO05D010480 3.6e-43 178.3 98 82.7
A08p04500 Brassica napus HOM05D009302 ORTHO05D010480 9.0e-42 173.7 127 73.2
AT1G48745 Arabidopsis thaliana HOM05D009302 ORTHO05D010480 3.2e-39 165.2 126 68.3
CARHR038670 Cardamine hirsuta HOM05D009302 ORTHO05D010480 1.2e-38 163.3 121 67.8
AL1G55450 Arabidopsis lyrata HOM05D009302 ORTHO05D010480 7.9e-38 160.6 114 71.1
BraA08t32477Z Brassica rapa HOM05D009302 ORTHO05D010480 1.5e-36 156.4 116 71.6
Carub.0001s3789 Capsella rubella HOM05D009302 ORTHO05D010480 4.0e-34 148.3 108 69.4
BcaB02g11311 Brassica carinata HOM05D009302 ORTHO05D010480 1.4e-31 139.8 100 69.0
Aa31LG10G4760 Aethionema arabicum HOM05D009302 ORTHO05D010480 1.7e-24 116.3 127 50.4
Aqoxy3G03833 Aquilegia oxysepala HOM05D009302 ORTHO05D010480 3.7e-11 72.0 105 44.8
Cpa.g.sc3.464 Carica papaya HOM05D009302 ORTHO05D010480 6.9e-10 67.8 71 46.5
Prupe.5G224800 Prunus persica HOM05D010130 ORTHO05D010480 2.6e-09 65.9 77 46.8
Sabra15G0041000 Salix brachista HOM05D009302 ORTHO05D010480 1.7e-08 63.2 71 45.1
CiPaw.16G089000 Carya illinoinensis HOM05D010130 ORTHO05D010480 2.2e-08 62.8 80 43.8
Thecc.03G041000 Theobroma cacao HOM05D010130 ORTHO05D010480 8.5e-08 60.8 70 42.9
Ciclev10023366m.g Citrus clementina HOM05D010130 ORTHO05D010480 1.9e-07 59.7 82 43.9
MBI16_g38077_MAGBIO Magnolia biondii HOM05D009302 ORTHO05D010480 1.9e-07 59.7 71 49.3
MBI16_g39818_MAGBIO Magnolia biondii HOM05D009302 ORTHO05D010480 1.9e-07 59.7 71 49.3
QL10p026531 Quercus lobata HOM05D010130 ORTHO05D010480 4.2e-07 58.5 69 46.4
QL93p0217_0001 Quercus lobata HOM05D010130 ORTHO05D010480 4.2e-07 58.5 69 46.4
Nn3g17951 Nelumbo nucifera HOM05D009302 ORTHO05D010480 1.2e-06 57.0 91 42.9
FvH4_6g26821 Fragaria vesca HOM05D010130 ORTHO05D010480 1.6e-06 56.6 67 44.8
FAN05G1532 Fragaria x ananassa HOM05D011814 ORTHO05D010480 1.6e-06 56.6 67 44.8
Atru.chr9.904 Acer truncatum HOM05D010130 ORTHO05D010480 4.7e-06 55.1 108 35.2


User provided reference genes

Program Settings