Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g37076 Brassica carinata HOM05D009403 ORTHO05D039331 5.5e-96 354.4 189 100.0
BolC3t19457H Brassica oleracea HOM05D009403 ORTHO05D013517 2.4e-43 179.5 108 91.7
C09p40630 Brassica napus HOM05D009403 ORTHO05D042064 3.3e-40 169.1 109 90.8
BolC9t56945H Brassica oleracea HOM05D009403 ORTHO05D042064 3.3e-40 169.1 109 90.8
BolC8t47242H Brassica oleracea HOM05D009403 ORTHO05D013517 1.4e-38 163.7 164 63.4
BraA08t32689Z Brassica rapa HOM05D009403 ORTHO05D013517 9.3e-35 151.0 164 62.2
BolC3t15968H Brassica oleracea HOM05D009403 ORTHO05D013517 1.7e-33 146.7 164 56.7
C07p10110 Brassica napus HOM05D009403 ORTHO05D013517 3.9e-33 145.6 167 62.3
C03p36550 Brassica napus HOM05D009403 ORTHO05D013517 3.3e-32 142.5 167 61.1
BolC7t41456H Brassica oleracea HOM05D009403 ORTHO05D013517 1.2e-29 134.0 167 57.5
C03p72390 Brassica napus HOM05D009403 ORTHO05D027659 2.1e-23 113.2 72 79.2
BolC3t19534H Brassica oleracea HOM05D009403 ORTHO05D027659 2.1e-23 113.2 72 79.2
C08p04390 Brassica napus HOM05D009403 ORTHO05D039331 2.8e-23 112.8 66 86.4
C05p55820 Brassica napus HOM05D009403 ORTHO05D027531 1.4e-19 100.5 61 93.4
BcaC01g06656 Brassica carinata HOM05D009403 ORTHO05D013517 2.5e-19 99.8 66 80.3
A08p06710 Brassica napus HOM05D009403 ORTHO05D013517 7.1e-19 98.2 76 81.6
C03p12190 Brassica napus HOM05D009403 ORTHO05D013517 7.1e-19 98.2 76 81.6
BcaC04g20683 Brassica carinata HOM05D009403 ORTHO05D013517 7.9e-18 94.7 66 92.4
BcaC01g05481 Brassica carinata HOM05D009403 ORTHO05D027659 3.0e-17 92.8 47 91.5
BcaC06g35882 Brassica carinata HOM05D009403 ORTHO05D013517 1.5e-16 90.5 66 86.4
BcaC01g01814 Brassica carinata HOM05D009403 ORTHO05D013517 2.5e-16 89.7 66 77.3
BraA04t16675Z Brassica rapa HOM05D009403 ORTHO05D013517 1.3e-15 87.4 52 86.5
Sp4g21910 Schrenkiella parvula HOM05D000334 ORTHO05D000200 6.2e-15 85.1 46 91.3
BcaC01g01813 Brassica carinata HOM05D009403 ORTHO05D027531 5.3e-14 82.0 41 90.2
BcaC05g29298 Brassica carinata HOM05D009403 ORTHO05D027531 2.6e-13 79.7 41 90.2
BolC5t34249H Brassica oleracea HOM05D009403 ORTHO05D027531 2.6e-13 79.7 41 90.2
BcaB08g36114 Brassica carinata HOM05D009403 ORTHO05D027659 3.4e-13 79.3 42 85.7
BcaB08g36115 Brassica carinata HOM05D009403 ORTHO05D013517 4.5e-13 79.0 58 79.3
AL4G37060 Arabidopsis lyrata HOM05D000334 ORTHO05D000200 5.8e-13 78.6 51 80.4
BcaC01g05483 Brassica carinata HOM05D000334 ORTHO05D000200 4.9e-12 75.5 41 90.2
C03p26260 Brassica napus HOM05D000334 ORTHO05D000200 4.9e-12 75.5 41 90.2
BolC3t15011H Brassica oleracea HOM05D000334 ORTHO05D000200 4.9e-12 75.5 41 90.2
A03p22180 Brassica napus HOM05D000334 ORTHO05D000200 8.4e-12 74.7 41 87.8
BraA03t11450Z Brassica rapa HOM05D000334 ORTHO05D000200 8.4e-12 74.7 41 87.8
Carub.0004s2169 Capsella rubella HOM05D000334 ORTHO05D000200 1.4e-11 73.9 46 80.4
Thhalv10017011m.g Eutrema salsugineum HOM05D000334 ORTHO05D000200 1.9e-11 73.6 46 78.3
CARHR134490 Cardamine hirsuta HOM05D000334 ORTHO05D000200 1.0e-09 67.8 44 79.5
Aa31LG5G20000 Aethionema arabicum HOM05D000334 ORTHO05D000200 8.7e-09 64.7 46 69.6
THA.LOC104810030 Tarenaya hassleriana HOM05D000334 ORTHO05D000200 9.0e-06 54.7 54 63.0


User provided reference genes

Program Settings