Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g37070 Brassica carinata HOM05D006880 ORTHO05D008638 1.1e-96 356.7 183 100.0
Sp1g36150 Schrenkiella parvula HOM05D006880 ORTHO05D008638 2.0e-79 299.3 198 80.8
Aa31LG8G5640 Aethionema arabicum HOM05D006880 ORTHO05D008638 2.6e-66 255.8 203 68.5
C05p46720 Brassica napus HOM05D006880 ORTHO05D008638 1.1e-64 250.4 203 68.5
Sp3g16890 Schrenkiella parvula HOM05D006880 ORTHO05D008638 4.1e-64 248.4 207 66.2
AL3G32180 Arabidopsis lyrata HOM05D006880 ORTHO05D008638 7.0e-64 247.7 200 67.5
BcaC02g12236 Brassica carinata HOM05D006880 ORTHO05D008638 7.0e-64 247.7 203 66.5
BcaC05g28570 Brassica carinata HOM05D006880 ORTHO05D008638 7.0e-64 247.7 203 66.5
BolC5t33399H Brassica oleracea HOM05D006880 ORTHO05D008638 7.0e-64 247.7 203 66.5
AT3G18800 Arabidopsis thaliana HOM05D006880 ORTHO05D008638 6.0e-63 244.6 200 67.0
Carub.0003s1862 Capsella rubella HOM05D006880 ORTHO05D008638 1.0e-62 243.8 200 67.0
BcaB06g25933 Brassica carinata HOM05D006880 ORTHO05D008638 1.5e-61 240.0 204 64.7
A05p30800 Brassica napus HOM05D006880 ORTHO05D008638 4.3e-61 238.4 206 64.1
BraA05t21922Z Brassica rapa HOM05D006880 ORTHO05D008638 4.3e-61 238.4 206 64.1
THA.LOC104821864 Tarenaya hassleriana HOM05D006880 ORTHO05D008638 3.6e-60 235.3 180 71.1
Thhalv10022284m.g Eutrema salsugineum HOM05D006880 ORTHO05D008638 8.1e-60 234.2 206 63.6
CARHR094210 Cardamine hirsuta HOM05D006880 ORTHO05D008638 4.0e-59 231.9 208 63.9
A08p04110 Brassica napus HOM05D006880 ORTHO05D008638 1.2e-55 220.3 143 84.6
Sabra19G0018800 Salix brachista HOM05D006880 ORTHO05D008638 3.9e-54 215.3 199 62.3
Sabra19G0023300 Salix brachista HOM05D006880 ORTHO05D008638 6.6e-54 214.5 199 61.8
Potri.019G006500 Populus trichocarpa HOM05D006880 ORTHO05D008638 1.6e-52 209.9 202 61.4
Duzib187G0911 Durio zibethinus HOM05D006880 ORTHO05D008638 8.1e-52 207.6 196 64.3
CiPaw.04G083800 Carya illinoinensis HOM05D006880 ORTHO05D008638 1.1e-51 207.2 198 61.1
Gohir.A10G083300 Gossypium hirsutum HOM05D006880 ORTHO05D008638 1.8e-51 206.5 196 64.3
Gohir.D10G105600 Gossypium hirsutum HOM05D006880 ORTHO05D008638 1.8e-51 206.5 196 64.3
Potri.001G309000 Populus trichocarpa HOM05D006880 ORTHO05D008638 1.8e-51 206.5 198 59.6
FAN19G0460 Fragaria x ananassa HOM05D006880 ORTHO05D008638 4.0e-51 205.3 197 61.4
Gorai.002G151100 Gossypium raimondii HOM05D006880 ORTHO05D008638 4.0e-51 205.3 191 64.9
Sabra16G0194800 Salix brachista HOM05D006880 ORTHO05D008638 4.0e-51 205.3 203 59.1
CiPaw.03G123600 Carya illinoinensis HOM05D006880 ORTHO05D008638 5.2e-51 204.9 199 61.8
QL06p051802 Quercus lobata HOM05D006880 ORTHO05D008638 5.2e-51 204.9 196 61.7
Prupe.6G162500 Prunus persica HOM05D006880 ORTHO05D008638 6.8e-51 204.5 197 61.4
COL.COLO4_22415 Corchorus olitorius HOM05D006880 ORTHO05D008638 8.9e-51 204.1 179 67.0
Duzib147G0678 Durio zibethinus HOM05D006880 ORTHO05D008638 8.9e-51 204.1 191 63.4
Lj1g0010031 Lotus japonicus HOM05D006880 ORTHO05D008638 1.2e-50 203.8 195 62.6
Gorai.011G115200 Gossypium raimondii HOM05D006880 ORTHO05D008638 1.5e-50 203.4 196 63.8
Psat5g063920 Pisum sativum HOM05D006880 ORTHO05D008638 1.5e-50 203.4 193 60.6
Thecc.01G120600 Theobroma cacao HOM05D006880 ORTHO05D008638 1.5e-50 203.4 196 63.8
Lalb_Chr08g0238661 Lupinus albus HOM05D006880 ORTHO05D008638 2.0e-50 203.0 195 61.0
FvH4_1g23610 Fragaria vesca HOM05D006880 ORTHO05D008638 2.6e-50 202.6 197 60.9
FAN23G3120 Fragaria x ananassa HOM05D006880 ORTHO05D008638 2.6e-50 202.6 197 60.9
FAN28G1236 Fragaria x ananassa HOM05D006880 ORTHO05D008638 2.6e-50 202.6 197 60.9
Cpa.g.sc453.1 Carica papaya HOM05D006880 ORTHO05D008638 3.4e-50 202.2 197 61.4
AUR62017937 Chenopodium quinoa HOM05D006880 ORTHO05D008638 3.4e-50 202.2 204 57.8
Glyma.09G116700 Glycine max HOM05D006880 ORTHO05D008638 3.4e-50 202.2 195 60.0
RcHm_v2.0_Chr2g0119191 Rosa chinensis HOM05D006880 ORTHO05D008638 3.4e-50 202.2 197 59.9
Phvul.009G147400 Phaseolus vulgaris HOM05D006880 ORTHO05D008638 5.8e-50 201.4 202 60.4
CANSAT01G0776 Cannabis sativa HOM05D006880 ORTHO05D008638 9.9e-50 200.7 181 64.1
PGR119G1657 Punica granatum HOM05D006880 ORTHO05D008638 9.9e-50 200.7 195 60.0
FAN26G3452 Fragaria x ananassa HOM05D006880 ORTHO05D008638 1.3e-49 200.3 197 60.4
Glyma.06G149800 Glycine max HOM05D006880 ORTHO05D008638 1.3e-49 200.3 198 58.6
MD01G1016600 Malus domestica HOM05D006880 ORTHO05D008638 1.3e-49 200.3 175 62.9
Manes.12G148400 Manihot esculenta HOM05D006880 ORTHO05D008638 1.7e-49 199.9 202 59.9
Ciclev10026534m.g Citrus clementina HOM05D006880 ORTHO05D008638 2.2e-49 199.5 202 61.4
Ca_16914_v3 Cicer arietinum L. HOM05D006880 ORTHO05D008638 2.9e-49 199.1 174 64.4
arahy.Tifrunner.gnm1.ann1.546D2B Arachis hypogaea HOM05D006880 ORTHO05D008638 4.9e-49 198.4 173 64.2
Glyma.09G116500 Glycine max HOM05D006880 ORTHO05D008638 4.9e-49 198.4 182 61.0
TWI79G0189 Tripterygium wilfordii HOM05D006880 ORTHO05D008638 4.9e-49 198.4 200 60.5
ClCG01G015680 Citrullus lanatus HOM05D006880 ORTHO05D008638 6.4e-49 198.0 205 57.6
Lalb_Chr11g0068241 Lupinus albus HOM05D006880 ORTHO05D008638 6.4e-49 198.0 198 60.6
Oeu054906.1 Olea europaea HOM05D006880 ORTHO05D008638 6.4e-49 198.0 197 58.4
ECA247G1470 Erigeron canadensis HOM05D006880 ORTHO05D008638 1.1e-48 197.2 191 62.8
HanXRQChr02g0039401 Helianthus annuus HOM05D006880 ORTHO05D008638 1.1e-48 197.2 190 61.1
Lj2A591T43 Lonicera japonica HOM05D006880 ORTHO05D008638 1.9e-48 196.4 188 60.1
ATR0772G040 Amborella trichopoda HOM05D006880 ORTHO05D008638 4.1e-48 195.3 188 60.1
TPR.G18722 Trifolium pratense HOM05D006880 ORTHO05D008638 4.1e-48 195.3 196 59.2
Atru.chr4.544 Acer truncatum HOM05D006880 ORTHO05D008638 5.4e-48 194.9 198 57.6
arahy.Tifrunner.gnm1.ann1.91R8ME Arachis hypogaea HOM05D006880 ORTHO05D008638 5.4e-48 194.9 187 59.4
Medtr3g095480 Medicago truncatula HOM05D006880 ORTHO05D008638 5.4e-48 194.9 174 63.2
Cc07_g17330 Coffea canephora HOM05D006880 ORTHO05D008638 7.1e-48 194.5 199 57.8
Nn1g06089 Nelumbo nucifera HOM05D006880 ORTHO05D008638 7.1e-48 194.5 179 60.9
PSO675G8574 Papaver somniferum HOM05D006880 ORTHO05D008638 7.1e-48 194.5 189 60.3
CSS0034618 Camellia sinensis var. sinensis HOM05D006880 ORTHO05D008638 9.2e-48 194.1 190 59.5
Solyc11g005390.3 Solanum lycopersicum HOM05D006880 ORTHO05D008638 1.2e-47 193.7 191 60.2
Sopen11g001400 Solanum pennellii HOM05D006880 ORTHO05D008638 1.2e-47 193.7 191 60.2
Aqoxy5G02095 Aquilegia oxysepala HOM05D006880 ORTHO05D008638 2.1e-47 193.0 179 60.9
Hma1.2p1_0006F.1_g004965 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 3.5e-47 192.2 193 60.1
Hma1.2p1_0025F.1_g016260 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 3.5e-47 192.2 193 60.1
Hma1.2p1_1667F.1_g296585 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 3.5e-47 192.2 193 60.1
PSO541G1054 Papaver somniferum HOM05D006880 ORTHO05D008638 3.5e-47 192.2 189 59.8
SGA_v2.0_scaffold178G39501 Striga asiatica HOM05D006880 ORTHO05D008638 4.6e-47 191.8 173 65.3
Actinidia06675 Actinidia chinensis HOM05D006880 ORTHO05D008638 6.0e-47 191.4 191 59.7
HanXRQChr05g0137731 Helianthus annuus HOM05D006880 ORTHO05D008638 7.8e-47 191.0 194 58.2
MELO3C008029.2 Cucumis melo HOM05D006880 ORTHO05D008638 1.3e-46 190.3 194 58.8
PGSC0003DMG400003965 Solanum tuberosum HOM05D006880 ORTHO05D008638 2.3e-46 189.5 191 59.2
Migut.H01108 Erythranthe guttata HOM05D006880 ORTHO05D008638 5.1e-46 188.3 196 57.1
CDE08G0745 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 1.1e-45 187.2 182 58.8
GSVIVG01026589001 Vitis vinifera HOM05D006880 ORTHO05D008638 1.1e-45 187.2 168 61.9
TAR628G0678 Trochodendron aralioides HOM05D006880 ORTHO05D008638 1.5e-45 186.8 194 57.7
Sc03g0004730 Simmondsia chinensis HOM05D006880 ORTHO05D008638 4.3e-45 185.3 174 60.3
HPP92_025026 Vanilla planifolia HOM05D006880 ORTHO05D008638 3.6e-44 182.2 184 57.1
HPP92_025033 Vanilla planifolia HOM05D006880 ORTHO05D008638 3.6e-44 182.2 184 57.1
MBI02_g23402_MAGBIO Magnolia biondii HOM05D006880 ORTHO05D008638 6.2e-44 181.4 171 61.4
Sed0021560 Sechium edule HOM05D006880 ORTHO05D008638 3.1e-43 179.1 185 58.4
Dinv09943 Davidia involucrata HOM05D006880 ORTHO05D008638 7.6e-42 174.5 137 67.9
CDE06G1704 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 2.9e-41 172.6 144 66.0
CsaV3_6G041940 Cucumis sativus L. HOM05D006880 ORTHO05D008638 2.4e-40 169.5 139 66.9
Gohir.D11G233000 Gossypium hirsutum HOM05D006880 ORTHO05D008638 4.6e-39 165.2 193 57.0
Nn5g28731 Nelumbo nucifera HOM05D006880 ORTHO05D008638 2.3e-38 162.9 173 54.3
Peaxi162Scf00025g02313 Petunia axillaris HOM05D006880 ORTHO05D008638 5.6e-37 158.3 133 63.2
Mapoly0012s0135 Marchantia polymorpha HOM05D006880 ORTHO05D008638 1.1e-32 144.1 172 47.7
SMO351G0309 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 5.4e-32 141.7 171 45.6
SMO196G0105 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 6.2e-28 128.3 172 42.4
AagrBONN_evm.TU.Sc2ySwM_228.250 Anthoceros agrestis HOM05D006880 ORTHO05D008638 1.1e-27 127.5 170 43.5
BraA08t32436Z Brassica rapa HOM05D006880 ORTHO05D008638 5.5e-24 115.2 56 96.4
Nitab4.5_0023130g0010 Nicotiana tabacum HOM05D006880 ORTHO05D008638 1.9e-21 106.7 75 69.3
Nitab4.5_0011433g0020 Nicotiana tabacum HOM05D006880 ORTHO05D008638 3.3e-21 105.9 75 69.3
Nn3g21133 Nelumbo nucifera HOM05D006880 ORTHO05D008638 8.2e-20 101.3 172 40.7
DCAR_016722 Daucus carota HOM05D006880 ORTHO05D008638 1.5e-18 97.1 96 57.3
Os04g0687200 Oryza sativa ssp. japonica HOM05D006880 ORTHO05D008638 1.1e-16 90.9 117 45.3
Nn8g40983 Nelumbo nucifera HOM05D006880 ORTHO05D008638 1.4e-16 90.5 171 39.2
Lj6g0028046 Lotus japonicus HOM05D006880 ORTHO05D008638 6.9e-11 71.6 50 70.0
Nn3g19205 Nelumbo nucifera HOM05D006880 ORTHO05D008638 1.1e-08 64.3 51 58.8


User provided reference genes

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