Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g37053 Brassica carinata HOM05D008292 ORTHO05D003352 8.8e-87 323.6 159 100.0
A05p32880 Brassica napus HOM05D008292 ORTHO05D003352 1.3e-77 293.1 181 82.9
C03p19740 Brassica napus HOM05D008292 ORTHO05D003352 1.3e-77 293.1 181 82.9
BraA05t22695Z Brassica rapa HOM05D008292 ORTHO05D003352 1.3e-77 293.1 181 82.9
BolC4t27064H Brassica oleracea HOM05D008292 ORTHO05D003352 3.7e-77 291.6 181 82.3
BcaC02g08358 Brassica carinata HOM05D008292 ORTHO05D003352 3.6e-72 275.0 169 82.2
BcaC03g15793 Brassica carinata HOM05D008292 ORTHO05D003352 4.7e-56 221.5 144 80.6
C03p76730 Brassica napus HOM05D008292 ORTHO05D003352 6.8e-55 217.6 113 92.9
BcaB05g23849 Brassica carinata HOM05D008292 ORTHO05D003352 1.0e-50 203.8 181 64.1
BcaC07g37399 Brassica carinata HOM05D008292 ORTHO05D003352 5.0e-50 201.4 201 52.7
BcaC07g40693 Brassica carinata HOM05D008292 ORTHO05D003352 8.6e-50 200.7 159 69.2
C08p36920 Brassica napus HOM05D008292 ORTHO05D003352 1.9e-49 199.5 109 89.0
A06p31440 Brassica napus HOM05D008292 ORTHO05D003352 2.5e-49 199.1 217 48.8
C03p32250 Brassica napus HOM05D008292 ORTHO05D003352 1.2e-46 190.3 212 48.6
BolC3t21217H Brassica oleracea HOM05D008292 ORTHO05D003352 3.4e-46 188.7 96 94.8
A09p40840 Brassica napus HOM05D008292 ORTHO05D003352 2.2e-45 186.0 208 47.6
C07p08430 Brassica napus HOM05D008292 ORTHO05D003352 3.7e-45 185.3 212 47.6
BolC3t14353H Brassica oleracea HOM05D008292 ORTHO05D003352 3.7e-45 185.3 96 92.7
BcaNung06308 Brassica carinata HOM05D008292 ORTHO05D003352 4.1e-44 181.8 206 48.1
BcaC09g47930 Brassica carinata HOM05D008292 ORTHO05D003352 1.2e-43 180.3 177 53.1
BcaC06g36055 Brassica carinata HOM05D008292 ORTHO05D003352 6.2e-40 167.9 195 47.7
BolC3t15567H Brassica oleracea HOM05D008292 ORTHO05D003352 4.0e-39 165.2 141 58.2
BraA08t34531Z Brassica rapa HOM05D008292 ORTHO05D003352 2.9e-37 159.1 140 54.3
BcaC03g17703 Brassica carinata HOM05D008292 ORTHO05D003352 4.1e-36 155.2 140 52.9
A05p03580 Brassica napus HOM05D003839 ORTHO05D003352 4.1e-36 155.2 234 39.3
BolC2t11778H Brassica oleracea HOM05D008292 ORTHO05D003352 4.1e-36 155.2 140 52.9
BraA02t07568Z Brassica rapa HOM05D008292 ORTHO05D003352 4.1e-36 155.2 234 39.3
BolC2t12326H Brassica oleracea HOM05D008292 ORTHO05D003352 5.4e-36 154.8 140 53.6
BolC6t39088H Brassica oleracea HOM05D008292 ORTHO05D003352 6.6e-34 147.9 129 57.4
BcaC07g41300 Brassica carinata HOM05D008292 ORTHO05D003352 1.4e-31 140.2 211 41.2
C09p33270 Brassica napus HOM05D008292 ORTHO05D003352 6.4e-29 131.3 206 36.4
BolC9t56163H Brassica oleracea HOM05D008292 ORTHO05D003352 6.4e-29 131.3 206 36.4
A01p17040 Brassica napus HOM05D008292 ORTHO05D003352 2.4e-28 129.4 212 34.4
BraA09t39508Z Brassica rapa HOM05D008292 ORTHO05D003352 2.4e-28 129.4 212 34.4
BolC8t47715H Brassica oleracea HOM05D008292 ORTHO05D003352 4.1e-28 128.6 78 69.2
BcaB04g16904 Brassica carinata HOM05D008292 ORTHO05D003352 1.0e-26 124.0 209 32.1
BraA09t37976Z Brassica rapa HOM05D008292 ORTHO05D003352 1.5e-25 120.2 153 45.1
BcaB01g00999 Brassica carinata HOM05D008292 ORTHO05D003352 1.8e-23 113.2 138 39.1
BolC1t04612H Brassica oleracea HOM05D008292 ORTHO05D003352 6.8e-23 111.3 59 91.5
BcaC03g15888 Brassica carinata HOM05D008292 ORTHO05D003352 5.8e-22 108.2 127 40.2
A08p12750 Brassica napus HOM05D008292 ORTHO05D003352 1.4e-15 87.0 122 38.5
BraA08t33263Z Brassica rapa HOM05D008292 ORTHO05D003352 1.4e-15 87.0 122 38.5
BcaC02g11488 Brassica carinata HOM05D008292 ORTHO05D003352 1.2e-14 84.0 104 39.4
C04p14850 Brassica napus HOM05D008292 ORTHO05D003352 1.2e-14 84.0 104 39.4
BolC4t23058H Brassica oleracea HOM05D008292 ORTHO05D003352 2.0e-14 83.2 107 38.3
BolC7t41257H Brassica oleracea HOM05D008292 ORTHO05D003352 2.6e-14 82.8 176 33.0
C05p31020 Brassica napus HOM05D008292 ORTHO05D003352 2.2e-13 79.7 141 32.6
BolC5t31825H Brassica oleracea HOM05D008292 ORTHO05D003352 3.8e-13 79.0 141 33.3
Thhalv10002269m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 3.8e-13 79.0 114 32.5
BcaC05g27196 Brassica carinata HOM05D008292 ORTHO05D003352 1.1e-12 77.4 103 36.9
CARHR101890 Cardamine hirsuta HOM05D008292 ORTHO05D003352 2.4e-12 76.3 138 33.3
Thhalv10005434m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 3.2e-12 75.9 113 31.0
C04p33340 Brassica napus HOM05D003839 ORTHO05D003352 1.6e-11 73.6 103 34.0
C06p50270 Brassica napus HOM05D003839 ORTHO05D003352 1.6e-11 73.6 103 34.0
AT2G35280 Arabidopsis thaliana HOM05D008292 ORTHO05D003352 4.6e-11 72.0 134 31.3
BcaC04g22280 Brassica carinata HOM05D003839 ORTHO05D003352 4.6e-11 72.0 196 25.5
Thhalv10005441m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 6.0e-11 71.6 142 28.9
A03p53810 Brassica napus HOM05D000357 ORTHO05D000242 1.0e-10 70.9 89 34.8
C03p91870 Brassica napus HOM05D003839 ORTHO05D003352 1.3e-10 70.5 103 32.0
BolC3t21507H Brassica oleracea HOM05D003839 ORTHO05D003352 1.3e-10 70.5 103 32.0
AT1G14800 Arabidopsis thaliana HOM05D000313 ORTHO05D000065 1.7e-10 70.1 77 42.9
A09p20270 Brassica napus HOM05D003839 ORTHO05D003352 1.7e-10 70.1 138 31.2
BraA07t28801Z Brassica rapa HOM05D003839 ORTHO05D003352 2.3e-10 69.7 138 30.4
BcaB08g36676 Brassica carinata HOM05D008292 ORTHO05D003352 3.9e-10 68.9 126 33.3
C08p08700 Brassica napus HOM05D000096 ORTHO05D000045 3.9e-10 68.9 127 29.1
BcaNung02469 Brassica carinata HOM05D003839 ORTHO05D003352 5.1e-10 68.6 102 32.4
C07p40670 Brassica napus HOM05D003839 ORTHO05D003352 5.1e-10 68.6 102 32.4
C04p11170 Brassica napus HOM05D008292 ORTHO05D003352 6.6e-10 68.2 96 40.6
BolC4t22764H Brassica oleracea HOM05D008292 ORTHO05D003352 6.6e-10 68.2 96 40.6
A03p67960 Brassica napus HOM05D003839 ORTHO05D003352 8.7e-10 67.8 123 32.5
BraA09t40513Z Brassica rapa HOM05D003839 ORTHO05D003352 8.7e-10 67.8 154 25.3
BcaC01g01423 Brassica carinata HOM05D003839 ORTHO05D003352 1.5e-09 67.0 89 33.7
BolC6t38134H Brassica oleracea HOM05D003839 ORTHO05D003352 1.5e-09 67.0 107 28.0
C09p21410 Brassica napus HOM05D003839 ORTHO05D003352 1.9e-09 66.6 95 32.6
BraA08t34532Z Brassica rapa HOM05D003839 ORTHO05D003352 3.3e-09 65.9 107 27.1
Thhalv10003388m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 3.3e-09 65.9 89 29.2
BolC4t27974H Brassica oleracea HOM05D003839 ORTHO05D003352 5.6e-09 65.1 94 35.1
BcaB05g24307 Brassica carinata HOM05D003839 ORTHO05D003352 7.3e-09 64.7 118 31.4
BcaB08g35221 Brassica carinata HOM05D003839 ORTHO05D003352 7.3e-09 64.7 98 30.6
A02p28670 Brassica napus HOM05D003839 ORTHO05D003352 7.3e-09 64.7 107 28.0
BraA02t07902Z Brassica rapa HOM05D003839 ORTHO05D003352 7.3e-09 64.7 107 28.0
BcaB01g01517 Brassica carinata HOM05D003839 ORTHO05D003352 1.3e-08 63.9 106 28.3
BcaB04g17572 Brassica carinata HOM05D003839 ORTHO05D003352 1.3e-08 63.9 113 28.3
BraA01t03014Z Brassica rapa HOM05D003839 ORTHO05D003352 1.3e-08 63.9 107 26.2
Thhalv10003316m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 1.3e-08 63.9 106 29.2
BcaB04g18348 Brassica carinata HOM05D003839 ORTHO05D003352 1.6e-08 63.5 168 23.2
BcaB06g26804 Brassica carinata HOM05D003839 ORTHO05D003352 1.6e-08 63.5 107 26.2
A04p07260 Brassica napus HOM05D003839 ORTHO05D003352 1.6e-08 63.5 93 30.1
BraA04t16421Z Brassica rapa HOM05D003839 ORTHO05D003352 1.6e-08 63.5 93 30.1
BcaC06g33695 Brassica carinata HOM05D003839 ORTHO05D003352 2.1e-08 63.2 98 28.6
A05p21770 Brassica napus HOM05D003839 ORTHO05D003352 2.1e-08 63.2 107 27.1
BolC5t32306H Brassica oleracea HOM05D003839 ORTHO05D003352 2.1e-08 63.2 107 28.0
BraA05t21098Z Brassica rapa HOM05D003839 ORTHO05D003352 2.1e-08 63.2 107 27.1
BcaB06g27258 Brassica carinata HOM05D003839 ORTHO05D003352 3.6e-08 62.4 107 29.0
A05p17610 Brassica napus HOM05D003839 ORTHO05D003352 3.6e-08 62.4 122 25.4
C04p41030 Brassica napus HOM05D003839 ORTHO05D003352 3.6e-08 62.4 105 24.8
BolC4t25686H Brassica oleracea HOM05D003839 ORTHO05D003352 3.6e-08 62.4 105 24.8
AT3G30430 Arabidopsis thaliana HOM05D008292 ORTHO05D003352 4.8e-08 62.0 68 42.6
BcaC05g29109 Brassica carinata HOM05D003839 ORTHO05D003352 4.8e-08 62.0 107 27.1
A09p19700 Brassica napus HOM05D003839 ORTHO05D003352 4.8e-08 62.0 74 36.5
C03p73890 Brassica napus HOM05D008292 ORTHO05D003352 4.8e-08 62.0 84 38.1
C05p53370 Brassica napus HOM05D003839 ORTHO05D003352 4.8e-08 62.0 107 27.1
BcaC05g27601 Brassica carinata HOM05D003839 ORTHO05D003352 6.2e-08 61.6 107 27.1
C02p24590 Brassica napus HOM05D003839 ORTHO05D003352 6.2e-08 61.6 101 27.7
C05p35870 Brassica napus HOM05D003839 ORTHO05D003352 6.2e-08 61.6 107 27.1
BcaB07g32710 Brassica carinata HOM05D003839 ORTHO05D003352 8.1e-08 61.2 100 29.0
C02p27640 Brassica napus HOM05D003839 ORTHO05D003352 8.1e-08 61.2 91 29.7
BolC6t35914H Brassica oleracea HOM05D003839 ORTHO05D003352 8.1e-08 61.2 95 34.7
AT5G17167 Arabidopsis thaliana HOM05D003839 ORTHO05D003352 1.1e-07 60.8 78 38.5
BcaB02g06630 Brassica carinata HOM05D003839 ORTHO05D003352 1.1e-07 60.8 135 28.9
BcaB07g32949 Brassica carinata HOM05D003839 ORTHO05D003352 1.1e-07 60.8 143 25.2
BolC9t55033H Brassica oleracea HOM05D003839 ORTHO05D003352 1.1e-07 60.8 145 26.9
Thhalv10002164m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 1.1e-07 60.8 102 29.4
BcaB01g00721 Brassica carinata HOM05D003839 ORTHO05D003352 1.4e-07 60.5 143 24.5
BcaB01g02875 Brassica carinata HOM05D003839 ORTHO05D003352 1.4e-07 60.5 143 25.2
BcaB03g16839 Brassica carinata HOM05D003839 ORTHO05D003352 1.4e-07 60.5 143 25.2
C03p63060 Brassica napus HOM05D003839 ORTHO05D003352 1.4e-07 60.5 107 27.1
BcaB07g31374 Brassica carinata HOM05D003839 ORTHO05D003352 1.8e-07 60.1 112 25.9
BcaB07g32609 Brassica carinata HOM05D003839 ORTHO05D003352 1.8e-07 60.1 143 25.2
C03p57520 Brassica napus HOM05D014297 ORTHO05D019911 2.4e-07 59.7 92 31.5
BraA01t02837Z Brassica rapa HOM05D003839 ORTHO05D003352 2.4e-07 59.7 107 25.2
BcaB04g17113 Brassica carinata HOM05D003839 ORTHO05D003352 3.1e-07 59.3 143 25.2
BcaB05g23330 Brassica carinata HOM05D003839 ORTHO05D003352 3.1e-07 59.3 110 26.4
A09p32650 Brassica napus HOM05D003839 ORTHO05D003352 3.1e-07 59.3 93 28.0
C04p25750 Brassica napus HOM05D003839 ORTHO05D003352 3.1e-07 59.3 95 31.6
BraA01t02749Z Brassica rapa HOM05D003839 ORTHO05D003352 3.1e-07 59.3 105 24.8
Manes.13G015600 Manihot esculenta HOM05D002915 ORTHO05D003004 3.1e-07 59.3 104 28.8
BcaB01g01663 Brassica carinata HOM05D003839 ORTHO05D003352 4.0e-07 58.9 100 27.0
BcaC01g02162 Brassica carinata HOM05D003839 ORTHO05D003352 4.0e-07 58.9 94 29.8
BcaC03g15389 Brassica carinata HOM05D003839 ORTHO05D003352 4.0e-07 58.9 84 32.1
BcaC03g16634 Brassica carinata HOM05D003839 ORTHO05D003352 4.0e-07 58.9 84 32.1
A05p21290 Brassica napus HOM05D003839 ORTHO05D003352 4.0e-07 58.9 107 26.2
C03p67990 Brassica napus HOM05D003839 ORTHO05D003352 4.0e-07 58.9 94 29.8
BolC5t34007H Brassica oleracea HOM05D003839 ORTHO05D003352 4.0e-07 58.9 107 26.2
BolC7t43565H Brassica oleracea HOM05D003839 ORTHO05D003352 4.0e-07 58.9 84 32.1
BolC8t48491H Brassica oleracea HOM05D003839 ORTHO05D003352 4.0e-07 58.9 107 26.2
BraA05t21037Z Brassica rapa HOM05D003839 ORTHO05D003352 4.0e-07 58.9 107 26.2
BcaB06g26196 Brassica carinata HOM05D003839 ORTHO05D003352 5.3e-07 58.5 107 26.2
C05p53340 Brassica napus HOM05D003839 ORTHO05D003352 5.3e-07 58.5 107 26.2
BcaC09g50233 Brassica carinata HOM05D003839 ORTHO05D003352 6.9e-07 58.2 75 32.0
Haze_24934 Corylus avellana HOM05D002915 ORTHO05D003004 6.9e-07 58.2 136 26.5
BcaB01g00514 Brassica carinata HOM05D003839 ORTHO05D003352 9.0e-07 57.8 81 29.6
A03p53820 Brassica napus HOM05D000943 ORTHO05D002475 9.0e-07 57.8 102 28.4
BolC4t24234H Brassica oleracea HOM05D003839 ORTHO05D003352 9.0e-07 57.8 95 30.5
C09p23320 Brassica napus HOM05D003839 ORTHO05D003352 1.2e-06 57.4 81 28.4
C06p24070 Brassica napus HOM05D018430 ORTHO05D020143 2.6e-06 56.2 69 33.3
BcaB04g17896 Brassica carinata HOM05D003839 ORTHO05D003352 3.4e-06 55.8 85 30.6
BcaC01g02980 Brassica carinata HOM05D003839 ORTHO05D003352 3.4e-06 55.8 67 35.8
BcaB07g31055 Brassica carinata HOM05D003839 ORTHO05D003352 4.5e-06 55.5 80 25.0
BcaNung06257 Brassica carinata HOM05D014297 ORTHO05D019911 4.5e-06 55.5 70 37.1
C05p33380 Brassica napus HOM05D000313 ORTHO05D000065 4.5e-06 55.5 102 29.4
BolC5t32063H Brassica oleracea HOM05D000313 ORTHO05D000065 4.5e-06 55.5 102 29.4
CSS0045033 Camellia sinensis var. sinensis HOM05D002915 ORTHO05D003004 4.5e-06 55.5 84 27.4
BcaB08g35818 Brassica carinata HOM05D003839 ORTHO05D003352 5.8e-06 55.1 107 22.4
C03p63070 Brassica napus HOM05D003839 ORTHO05D003352 5.8e-06 55.1 81 28.4
BcaC02g10611 Brassica carinata HOM05D003839 ORTHO05D003352 7.6e-06 54.7 91 29.7
BraA02t07279Z Brassica rapa HOM05D003839 ORTHO05D003352 7.6e-06 54.7 69 34.8
Cfa002665 Carpinus fangiana HOM05D002915 ORTHO05D003004 9.9e-06 54.3 89 31.5


User provided reference genes

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