Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g36866 Brassica carinata HOM05D012015 ORTHO05D011383 1.8e-63 245.7 121 100.0
BolC8t49341H Brassica oleracea HOM05D004186 ORTHO05D011383 9.1e-52 206.8 111 93.7
BolC2t11511H Brassica oleracea HOM05D012015 ORTHO05D011383 8.8e-39 163.7 88 93.2
C02p54480 Brassica napus HOM05D003206 ORTHO05D016781 1.2e-38 163.3 83 95.2
C03p16540 Brassica napus HOM05D004186 ORTHO05D011383 6.4e-21 104.4 53 92.5
C08p01710 Brassica napus HOM05D002592 ORTHO05D011383 1.6e-16 89.7 42 100.0
BolC2t07527H Brassica oleracea HOM05D004186 ORTHO05D032859 3.6e-16 88.6 51 80.4
C08p17140 Brassica napus HOM05D004186 ORTHO05D011383 2.3e-15 85.9 42 95.2
BcaC01g06364 Brassica carinata HOM05D004186 ORTHO05D011383 1.5e-14 83.2 42 92.9
A02p08350 Brassica napus HOM05D004186 ORTHO05D015971 1.6e-11 73.2 42 78.6
BraA02t05904Z Brassica rapa HOM05D004186 ORTHO05D015971 1.6e-11 73.2 42 78.6
BcaC07g38783 Brassica carinata HOM05D002592 ORTHO05D011383 2.1e-11 72.8 35 94.3
C02p14070 Brassica napus HOM05D004186 ORTHO05D032859 3.5e-11 72.0 42 78.6
BcaC03g14138 Brassica carinata HOM05D004186 ORTHO05D032859 7.8e-11 70.9 42 76.2
A09p12760 Brassica napus HOM05D012015 ORTHO05D014750 7.8e-11 70.9 59 61.0
BcaC04g22814 Brassica carinata HOM05D012015 ORTHO05D014750 6.6e-10 67.8 59 57.6
C09p15130 Brassica napus HOM05D012015 ORTHO05D014750 6.6e-10 67.8 59 57.6
BcaNung04097 Brassica carinata HOM05D012015 ORTHO05D014750 8.6e-10 67.4 42 83.3
Sp6g19340 Schrenkiella parvula HOM05D004186 ORTHO05D006965 4.3e-09 65.1 42 71.4
BcaC04g19942 Brassica carinata HOM05D004186 ORTHO05D006965 5.6e-09 64.7 49 61.2
C07p46470 Brassica napus HOM05D001159 ORTHO05D011383 5.6e-09 64.7 42 73.8
C09p49530 Brassica napus HOM05D004186 ORTHO05D006965 5.6e-09 64.7 49 61.2
BolC9t57806H Brassica oleracea HOM05D004186 ORTHO05D006965 5.6e-09 64.7 49 61.2
Thhalv10013406m.g Eutrema salsugineum HOM05D004186 ORTHO05D006965 5.6e-09 64.7 46 67.4
BraA09t36920Z Brassica rapa HOM05D012015 ORTHO05D014750 9.5e-09 63.9 59 57.6
C09p03000 Brassica napus HOM05D001159 ORTHO05D011383 1.6e-08 63.2 42 71.4
BolC9t53230H Brassica oleracea HOM05D001159 ORTHO05D011383 1.6e-08 63.2 42 71.4
BcaC05g27566 Brassica carinata HOM05D001159 ORTHO05D011383 8.1e-08 60.8 42 71.4
C05p35490 Brassica napus HOM05D001159 ORTHO05D011383 8.1e-08 60.8 42 71.4
BolC7t45165H Brassica oleracea HOM05D001159 ORTHO05D011383 1.8e-07 59.7 42 71.4
A10p15060 Brassica napus HOM05D004186 ORTHO05D006965 2.3e-07 59.3 42 64.3
BraA10t43588Z Brassica rapa HOM05D004186 ORTHO05D006965 2.3e-07 59.3 42 64.3
Sp3g33480 Schrenkiella parvula HOM05D012015 ORTHO05D014750 3.1e-07 58.9 64 59.4
AT5G57655 Arabidopsis thaliana HOM05D004186 ORTHO05D006965 5.2e-07 58.2 42 64.3
Carub.0008s1816 Capsella rubella HOM05D004186 ORTHO05D006965 2.0e-06 56.2 42 61.9
CARHR271410 Cardamine hirsuta HOM05D004186 ORTHO05D006965 4.4e-06 55.1 43 62.8


User provided reference genes

Program Settings