Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g36517 Brassica carinata HOM05D000065 ORTHO05D000162 1.8e-30 135.2 64 100.0
BcaC06g36516 Brassica carinata HOM05D000065 ORTHO05D000162 2.2e-28 128.3 60 100.0
A07p01660 Brassica napus HOM05D000065 ORTHO05D000162 6.3e-28 126.7 60 98.3
BraA07t27968Z Brassica rapa HOM05D000065 ORTHO05D000162 6.3e-28 126.7 60 98.3
BcaB03g16699 Brassica carinata HOM05D000065 ORTHO05D000162 8.3e-28 126.3 60 98.3
BcaB03g16703 Brassica carinata HOM05D000065 ORTHO05D000162 8.3e-28 126.3 60 98.3
C07p03430 Brassica napus HOM05D000065 ORTHO05D000162 8.3e-28 126.3 60 98.3
C07p03420 Brassica napus HOM05D000065 ORTHO05D000162 1.2e-26 122.5 60 96.7
BolC7t40741H Brassica oleracea HOM05D000065 ORTHO05D000162 1.2e-26 122.5 60 96.7
Thhalv10022766m.g Eutrema salsugineum HOM05D000065 ORTHO05D000162 1.0e-22 109.4 60 83.3
C09p14420 Brassica napus HOM05D000065 ORTHO05D000162 2.6e-21 104.8 60 81.7
BraA09t36863Z Brassica rapa HOM05D000065 ORTHO05D000162 2.6e-21 104.8 60 81.7
A09p12170 Brassica napus HOM05D000065 ORTHO05D000162 9.8e-21 102.8 60 80.0
Sp3g32440 Schrenkiella parvula HOM05D000065 ORTHO05D000162 9.8e-21 102.8 60 78.3
AL3G52900 Arabidopsis lyrata HOM05D000065 ORTHO05D000162 5.4e-19 97.1 60 73.3
AT2G19010 Arabidopsis thaliana HOM05D000065 ORTHO05D000162 7.8e-18 93.2 60 71.7
CARHR109530 Cardamine hirsuta HOM05D000065 ORTHO05D000162 3.3e-16 87.8 60 63.3
A05p21450 Brassica napus HOM05D000065 ORTHO05D000162 4.7e-15 84.0 60 65.0
BraA05t21061Z Brassica rapa HOM05D000065 ORTHO05D000162 4.7e-15 84.0 60 65.0
Carub.0003s3329 Capsella rubella HOM05D000065 ORTHO05D000162 4.7e-15 84.0 60 66.7
AL3G52870 Arabidopsis lyrata HOM05D000065 ORTHO05D000162 8.0e-15 83.2 60 66.7
AT2G19050 Arabidopsis thaliana HOM05D000065 ORTHO05D000162 2.3e-14 81.6 60 65.0
Thhalv10022764m.g Eutrema salsugineum HOM05D000065 ORTHO05D000162 3.1e-14 81.3 60 65.0
AL3G52860 Arabidopsis lyrata HOM05D000065 ORTHO05D000162 4.0e-14 80.9 60 61.7
BcaB07g31626 Brassica carinata HOM05D000065 ORTHO05D000162 5.2e-14 80.5 60 63.3
BolC5t32339H Brassica oleracea HOM05D000065 ORTHO05D000162 1.5e-13 79.0 60 61.7
C05p36140 Brassica napus HOM05D000065 ORTHO05D000162 2.6e-13 78.2 55 67.3
BcaC01g02868 Brassica carinata HOM05D000065 ORTHO05D000162 7.5e-13 76.6 60 58.3
C03p59440 Brassica napus HOM05D000065 ORTHO05D000162 7.5e-13 76.6 60 58.3
BolC3t18207H Brassica oleracea HOM05D000065 ORTHO05D000162 7.5e-13 76.6 60 58.3
CARHR114660 Cardamine hirsuta HOM05D000065 ORTHO05D000162 9.8e-13 76.3 53 64.2
Aa31LG8G16080 Aethionema arabicum HOM05D000065 ORTHO05D000162 1.3e-12 75.9 64 59.4
AT2G19060 Arabidopsis thaliana HOM05D000065 ORTHO05D000162 1.3e-12 75.9 62 58.1
Carub.0003s3330 Capsella rubella HOM05D000065 ORTHO05D000162 2.2e-12 75.1 60 56.7
A06p33030 Brassica napus HOM05D000065 ORTHO05D000162 3.7e-12 74.3 60 56.7
BraA06t26234Z Brassica rapa HOM05D000065 ORTHO05D000162 3.7e-12 74.3 60 56.7
BcaB08g34838 Brassica carinata HOM05D000065 ORTHO05D000162 4.9e-12 73.9 60 56.7
Aa31LG8G16090 Aethionema arabicum HOM05D000065 ORTHO05D000162 1.1e-11 72.8 60 53.3
BcaC05g27631 Brassica carinata HOM05D000065 ORTHO05D000162 1.1e-11 72.8 49 69.4
CARHR109570 Cardamine hirsuta HOM05D000065 ORTHO05D000162 3.2e-11 71.2 60 56.7
CARHR238040 Cardamine hirsuta HOM05D000065 ORTHO05D000162 3.5e-10 67.8 50 60.0
THA.LOC104803481 Tarenaya hassleriana HOM05D000065 ORTHO05D000162 6.0e-10 67.0 62 53.2
Aa31LG2G20410 Aethionema arabicum HOM05D000065 ORTHO05D000162 1.0e-09 66.2 50 60.0
Sp7g27990 Schrenkiella parvula HOM05D000065 ORTHO05D000162 1.7e-09 65.5 50 60.0
BcaB03g12633 Brassica carinata HOM05D000065 ORTHO05D000162 3.0e-09 64.7 50 60.0
A08p19400 Brassica napus HOM05D000065 ORTHO05D000162 3.9e-09 64.3 50 58.0
BraA08t33901Z Brassica rapa HOM05D000065 ORTHO05D000162 3.9e-09 64.3 50 58.0
BcaC01g01213 Brassica carinata HOM05D000065 ORTHO05D000162 5.0e-09 63.9 50 58.0
C03p88870 Brassica napus HOM05D000065 ORTHO05D000162 5.0e-09 63.9 50 58.0
BolC3t21200H Brassica oleracea HOM05D000065 ORTHO05D000162 5.0e-09 63.9 50 58.0
BcaC01g01211 Brassica carinata HOM05D000065 ORTHO05D000162 6.6e-09 63.5 50 60.0
C03p88890 Brassica napus HOM05D000065 ORTHO05D000162 6.6e-09 63.5 50 60.0
BolC3t21201H Brassica oleracea HOM05D000065 ORTHO05D000162 6.6e-09 63.5 50 60.0
BraA08t33904Z Brassica rapa HOM05D000065 ORTHO05D000162 8.6e-09 63.2 50 60.0
Thhalv10025601m.g Eutrema salsugineum HOM05D000065 ORTHO05D000162 1.1e-08 62.8 50 60.0
AT4G30140 Arabidopsis thaliana HOM05D000065 ORTHO05D000162 2.5e-08 61.6 50 62.0
AL7G22050 Arabidopsis lyrata HOM05D000065 ORTHO05D000162 3.3e-08 61.2 50 60.0
Sp7g28000 Schrenkiella parvula HOM05D000065 ORTHO05D000162 3.3e-08 61.2 50 56.0
Carub.0007s1047 Capsella rubella HOM05D000065 ORTHO05D000162 4.3e-08 60.8 50 60.0
BcaC09g51794 Brassica carinata HOM05D000065 ORTHO05D000162 7.3e-08 60.1 50 56.0
C01p08950 Brassica napus HOM05D000065 ORTHO05D000162 7.3e-08 60.1 50 56.0
BolC1t00886H Brassica oleracea HOM05D000065 ORTHO05D000162 7.3e-08 60.1 50 56.0
THA.LOC104804488 Tarenaya hassleriana HOM05D000065 ORTHO05D000162 1.6e-07 58.9 52 48.1
Carub.0003s3327 Capsella rubella HOM05D000065 ORTHO05D000162 2.8e-07 58.2 41 63.4


User provided reference genes

Program Settings