Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g36461 Brassica carinata HOM05D003835 ORTHO05D004930 1.9e-195 685.6 335 100.0
BcaC03g17353 Brassica carinata HOM05D003835 ORTHO05D004930 5.3e-150 534.6 362 77.6
BcaC06g35964 Brassica carinata HOM05D003835 ORTHO05D004930 5.0e-140 501.5 362 74.9
BcaC03g16671 Brassica carinata HOM05D003835 ORTHO05D004930 3.4e-96 355.9 362 55.8
BcaB01g01376 Brassica carinata HOM05D003835 ORTHO05D004930 1.8e-94 350.1 382 54.2
BcaB06g26909 Brassica carinata HOM05D003835 ORTHO05D004930 3.7e-87 325.9 362 53.3
BcaC03g16196 Brassica carinata HOM05D003835 ORTHO05D004930 3.7e-87 325.9 289 62.3
BcaC02g10560 Brassica carinata HOM05D003835 ORTHO05D004930 1.5e-80 303.9 324 57.1
BcaC05g27589 Brassica carinata HOM05D003835 ORTHO05D004930 4.9e-79 298.9 385 49.1
BcaC01g02153 Brassica carinata HOM05D003835 ORTHO05D004930 1.9e-75 287.0 389 48.3
BcaC09g49698 Brassica carinata HOM05D003835 ORTHO05D004930 4.0e-73 279.3 283 56.2
BcaB01g01339 Brassica carinata HOM05D003835 ORTHO05D004930 8.9e-73 278.1 339 49.0
BraA05t21182Z Brassica rapa HOM05D003835 ORTHO05D004930 1.6e-69 267.3 362 48.1
BraA08t32792Z Brassica rapa HOM05D003835 ORTHO05D004930 3.9e-68 262.7 416 44.2
BcaC05g27887 Brassica carinata HOM05D003835 ORTHO05D004930 1.2e-64 251.1 274 49.3
BcaC01g01952 Brassica carinata HOM05D003835 ORTHO05D004930 4.9e-63 245.7 212 60.8
BcaC01g02168 Brassica carinata HOM05D003835 ORTHO05D004930 2.7e-61 240.0 288 47.6
BcaC04g20985 Brassica carinata HOM05D003835 ORTHO05D004930 2.3e-60 236.9 192 60.9
BcaB07g33106 Brassica carinata HOM05D003835 ORTHO05D004930 1.9e-59 233.8 183 63.9
BcaC05g27575 Brassica carinata HOM05D003835 ORTHO05D004930 4.7e-58 229.2 271 47.6
BcaC06g36022 Brassica carinata HOM05D003835 ORTHO05D004930 6.2e-58 228.8 337 42.4
BcaC05g28695 Brassica carinata HOM05D003835 ORTHO05D004930 1.4e-57 227.6 324 47.5
BraA03t15672Z Brassica rapa HOM05D003835 ORTHO05D004930 1.4e-57 227.6 388 42.5
BcaC04g20891 Brassica carinata HOM05D003835 ORTHO05D004930 1.8e-57 227.3 226 54.0
BcaC03g16445 Brassica carinata HOM05D003835 ORTHO05D004930 5.2e-57 225.7 316 45.6
BcaC04g20991 Brassica carinata HOM05D003835 ORTHO05D004930 5.2e-57 225.7 278 45.7
BcaC02g10732 Brassica carinata HOM05D003835 ORTHO05D004930 9.0e-57 224.9 306 44.4
BolC8t47793H Brassica oleracea HOM05D003835 ORTHO05D004930 9.0e-57 224.9 220 53.6
BcaC04g20623 Brassica carinata HOM05D003835 ORTHO05D004930 1.3e-55 221.1 227 52.4
BcaC02g10813 Brassica carinata HOM05D003835 ORTHO05D004930 1.1e-54 218.0 248 48.0
BcaC04g20843 Brassica carinata HOM05D003835 ORTHO05D004930 5.4e-54 215.7 229 50.7
BcaC07g37476 Brassica carinata HOM05D003835 ORTHO05D004930 2.8e-50 203.4 153 64.1
BcaC01g02043 Brassica carinata HOM05D003835 ORTHO05D004930 3.6e-50 203.0 318 40.6
BcaC06g36790 Brassica carinata HOM05D003835 ORTHO05D004930 8.4e-47 191.8 264 43.9
BcaC08g43746 Brassica carinata HOM05D003835 ORTHO05D004930 3.2e-46 189.9 135 65.2
BolC4t24052H Brassica oleracea HOM05D003835 ORTHO05D004930 5.4e-46 189.1 186 52.2
BcaC03g16677 Brassica carinata HOM05D003835 ORTHO05D004930 7.1e-46 188.7 138 63.8
BcaNung05987 Brassica carinata HOM05D003835 ORTHO05D004930 9.3e-46 188.3 294 40.5
BcaC04g20857 Brassica carinata HOM05D003835 ORTHO05D004930 2.7e-45 186.8 201 51.7
BcaC04g20889 Brassica carinata HOM05D003835 ORTHO05D004930 6.0e-45 185.7 135 61.5
BcaC05g27891 Brassica carinata HOM05D003835 ORTHO05D004930 6.7e-44 182.2 167 54.5
BcaC09g49753 Brassica carinata HOM05D003835 ORTHO05D004930 1.3e-42 177.9 135 64.4
BcaB05g23456 Brassica carinata HOM05D003835 ORTHO05D004930 4.5e-40 169.5 137 63.5
BcaB01g01100 Brassica carinata HOM05D003835 ORTHO05D004930 7.6e-40 168.7 221 46.6
BolC8t50199H Brassica oleracea HOM05D003835 ORTHO05D004930 9.9e-40 168.3 154 60.4
BcaC09g49664 Brassica carinata HOM05D003835 ORTHO05D004930 6.4e-39 165.6 114 67.5
BcaC07g39533 Brassica carinata HOM05D003835 ORTHO05D004930 1.1e-38 164.9 151 60.9
BcaB05g23138 Brassica carinata HOM05D003835 ORTHO05D004930 2.3e-36 157.1 259 42.9
BcaC04g20805 Brassica carinata HOM05D003835 ORTHO05D004930 2.3e-36 157.1 114 63.2
BcaC09g49645 Brassica carinata HOM05D003835 ORTHO05D004930 3.9e-36 156.4 239 41.4
BcaC07g37247 Brassica carinata HOM05D003835 ORTHO05D004930 4.8e-34 149.4 266 39.8
BolC4t24276H Brassica oleracea HOM05D003835 ORTHO05D004930 5.3e-33 146.0 324 34.3
BcaC01g02336 Brassica carinata HOM05D003835 ORTHO05D004930 4.5e-32 142.9 113 59.3
BcaC09g49552 Brassica carinata HOM05D003835 ORTHO05D004930 2.2e-31 140.6 93 67.7
BolC8t47946H Brassica oleracea HOM05D003835 ORTHO05D004930 2.1e-29 134.0 250 37.2
BcaC04g20851 Brassica carinata HOM05D003835 ORTHO05D004930 3.5e-29 133.3 243 38.3
BcaC06g35990 Brassica carinata HOM05D003835 ORTHO05D004930 1.3e-28 131.3 104 63.5
BcaC02g10604 Brassica carinata HOM05D003835 ORTHO05D004930 3.0e-28 130.2 266 38.0
BcaC04g20888 Brassica carinata HOM05D003835 ORTHO05D004930 2.5e-27 127.1 97 61.9
BcaB01g01286 Brassica carinata HOM05D003835 ORTHO05D004930 7.4e-27 125.6 146 51.4
BcaC07g37248 Brassica carinata HOM05D003835 ORTHO05D004930 1.3e-26 124.8 96 61.5
BcaC05g27703 Brassica carinata HOM05D003835 ORTHO05D004930 3.7e-26 123.2 270 35.9
BcaB05g23025 Brassica carinata HOM05D003835 ORTHO05D004930 5.3e-25 119.4 132 49.2
BcaC06g35829 Brassica carinata HOM05D003835 ORTHO05D004930 1.0e-23 115.2 320 30.9
BolC1t03343H Brassica oleracea HOM05D003835 ORTHO05D004930 5.0e-23 112.8 138 50.7
BcaC03g16557 Brassica carinata HOM05D007458 ORTHO05D009533 6.5e-23 112.5 141 40.4
BraA06t25395Z Brassica rapa HOM05D003835 ORTHO05D004930 8.5e-23 112.1 148 45.9
BcaC03g16533 Brassica carinata HOM05D003835 ORTHO05D004930 1.6e-21 107.8 130 50.0
BolC3t19175H Brassica oleracea HOM05D003835 ORTHO05D004930 1.8e-20 104.4 150 39.3
BcaC03g16751 Brassica carinata HOM05D003835 ORTHO05D004930 3.0e-20 103.6 141 39.0
BolC8t47785H Brassica oleracea HOM05D003835 ORTHO05D004930 8.8e-20 102.1 119 47.9
BcaC03g16198 Brassica carinata HOM05D003835 ORTHO05D004930 1.1e-19 101.7 151 35.8
BcaC06g35836 Brassica carinata HOM05D003835 ORTHO05D004930 9.7e-19 98.6 94 59.6
BolC6t36351H Brassica oleracea HOM05D003835 ORTHO05D014092 9.7e-19 98.6 99 51.5
BcaB08g35159 Brassica carinata HOM05D003835 ORTHO05D004930 1.7e-18 97.8 131 38.9
BcaC07g37471 Brassica carinata HOM05D003835 ORTHO05D004930 1.7e-18 97.8 111 46.8
BcaC07g37593 Brassica carinata HOM05D003835 ORTHO05D004930 1.7e-18 97.8 76 60.5
BolC8t47786H Brassica oleracea HOM05D003835 ORTHO05D014092 1.7e-18 97.8 157 40.8
BolC2t11376H Brassica oleracea HOM05D003835 ORTHO05D004930 2.8e-18 97.1 118 41.5
BraA05t21049Z Brassica rapa HOM05D003835 ORTHO05D014092 1.8e-17 94.4 106 49.1
BcaB06g26790 Brassica carinata HOM05D003835 ORTHO05D004930 2.4e-17 94.0 136 36.8
BraA01t02821Z Brassica rapa HOM05D003835 ORTHO05D004930 2.4e-17 94.0 208 35.1
BcaC07g37472 Brassica carinata HOM05D003835 ORTHO05D014092 3.1e-17 93.6 101 48.5
BcaC03g16676 Brassica carinata HOM05D003835 ORTHO05D004930 6.9e-17 92.4 133 47.4
Carub.0008s0643 Capsella rubella HOM05D003835 ORTHO05D004930 2.0e-16 90.9 136 32.4
BcaC09g48282 Brassica carinata HOM05D003835 ORTHO05D004930 4.5e-16 89.7 51 78.4
BcaC06g36783 Brassica carinata HOM05D003835 ORTHO05D004930 5.9e-16 89.4 73 58.9
BcaC09g48541 Brassica carinata HOM05D003835 ORTHO05D004930 5.9e-16 89.4 140 35.0
BcaC06g35991 Brassica carinata HOM05D003835 ORTHO05D014092 1.0e-15 88.6 99 47.5
AL4G20670 Arabidopsis lyrata HOM05D003835 ORTHO05D004930 2.9e-15 87.0 133 36.1
BcaC01g02227 Brassica carinata HOM05D003835 ORTHO05D004930 3.8e-15 86.7 99 50.5
BcaC07g37517 Brassica carinata HOM05D003835 ORTHO05D004930 3.8e-15 86.7 62 61.3
BcaC07g37567 Brassica carinata HOM05D003835 ORTHO05D014092 5.0e-15 86.3 93 48.4
BcaC01g02120 Brassica carinata HOM05D003835 ORTHO05D004930 6.5e-15 85.9 138 42.0
BcaC05g28049 Brassica carinata HOM05D003835 ORTHO05D004930 1.4e-14 84.7 191 34.0
BraA09t39004Z Brassica rapa HOM05D003835 ORTHO05D014092 2.5e-14 84.0 92 47.8
BcaC03g16229 Brassica carinata HOM05D003835 ORTHO05D014092 3.2e-14 83.6 93 46.2
BcaC05g27823 Brassica carinata HOM05D003835 ORTHO05D004930 3.2e-14 83.6 68 57.4
BcaC05g28699 Brassica carinata HOM05D007458 ORTHO05D009533 3.2e-14 83.6 165 36.4
BcaC01g02117 Brassica carinata HOM05D003835 ORTHO05D004930 4.2e-14 83.2 158 37.3
BcaC03g16471 Brassica carinata HOM05D003835 ORTHO05D004930 7.2e-14 82.4 107 43.9
BcaB02g11345 Brassica carinata HOM05D003835 ORTHO05D004930 2.1e-13 80.9 111 39.6
BcaC02g10387 Brassica carinata HOM05D003835 ORTHO05D004930 2.1e-13 80.9 366 27.6
BcaC03g16230 Brassica carinata HOM05D003835 ORTHO05D004930 3.6e-13 80.1 66 59.1
BcaC04g20842 Brassica carinata HOM05D003835 ORTHO05D004930 4.7e-13 79.7 222 32.9
BcaC03g16231 Brassica carinata HOM05D003835 ORTHO05D014092 1.8e-12 77.8 91 45.1
BcaC06g35162 Brassica carinata HOM05D003835 ORTHO05D004930 2.3e-12 77.4 92 42.4
BcaC06g36053 Brassica carinata HOM05D003835 ORTHO05D004930 2.3e-12 77.4 72 51.4
BolC2t10319H Brassica oleracea HOM05D003835 ORTHO05D004930 6.7e-12 75.9 90 46.7
BcaC08g44357 Brassica carinata HOM05D003835 ORTHO05D004930 8.8e-12 75.5 100 40.0
BcaC03g16228 Brassica carinata HOM05D003835 ORTHO05D004930 1.5e-11 74.7 90 43.3
BcaC04g20890 Brassica carinata HOM05D003835 ORTHO05D014092 4.4e-11 73.2 101 41.6
BcaC06g35918 Brassica carinata HOM05D003835 ORTHO05D004930 4.4e-11 73.2 88 51.1
BcaC03g14834 Brassica carinata HOM05D003835 ORTHO05D004930 7.4e-11 72.4 100 41.0
BraA05t21204Z Brassica rapa HOM05D003835 ORTHO05D004930 9.7e-11 72.0 47 76.6
BcaC05g27889 Brassica carinata HOM05D003835 ORTHO05D014092 1.3e-10 71.6 97 45.4
CANSAT35G1012 Cannabis sativa HOM05D027150 ORTHO05D028423 1.3e-10 71.6 105 36.2
BcaC03g16787 Brassica carinata HOM05D003835 ORTHO05D004930 2.2e-10 70.9 89 49.4
BcaB05g23111 Brassica carinata HOM05D003835 ORTHO05D004930 4.8e-10 69.7 37 89.2
BcaC09g50045 Brassica carinata HOM05D003835 ORTHO05D004930 6.3e-10 69.3 106 38.7
BcaB02g11288 Brassica carinata HOM05D003835 ORTHO05D004930 8.2e-10 68.9 82 48.8
BcaB06g26908 Brassica carinata HOM05D003835 ORTHO05D004930 1.1e-09 68.6 37 86.5
BcaC01g02337 Brassica carinata HOM05D003835 ORTHO05D014092 1.1e-09 68.6 97 45.4
BcaB04g17199 Brassica carinata HOM05D003835 ORTHO05D004930 1.8e-09 67.8 37 86.5
BcaC03g16553 Brassica carinata HOM05D003835 ORTHO05D004930 1.8e-09 67.8 45 75.6
Oeu002338.1 Olea europaea HOM05D011150 ORTHO05D011451 1.8e-09 67.8 126 34.9
BcaC05g27888 Brassica carinata HOM05D003835 ORTHO05D004930 3.1e-09 67.0 80 46.2
BcaB08g35438 Brassica carinata HOM05D003835 ORTHO05D004930 4.1e-09 66.6 87 40.2
CANSAT35G0823 Cannabis sativa HOM05D014149 ORTHO05D004930 4.1e-09 66.6 125 32.0
TWI14G0077 Tripterygium wilfordii HOM05D015010 ORTHO05D000116 4.1e-09 66.6 105 35.2
CANSAT54G2560 Cannabis sativa HOM05D012521 ORTHO05D011451 9.1e-09 65.5 112 33.0
BcaC03g16405 Brassica carinata HOM05D003835 ORTHO05D004930 1.5e-08 64.7 151 33.8
BcaC06g35919 Brassica carinata HOM05D003835 ORTHO05D004930 1.5e-08 64.7 75 49.3
CANSAT25G0896 Cannabis sativa HOM05D012521 ORTHO05D011451 2.0e-08 64.3 112 32.1
TWI36G1308 Tripterygium wilfordii HOM05D015010 ORTHO05D019384 2.6e-08 63.9 106 34.0
C05p36390 Brassica napus HOM05D003835 ORTHO05D014092 4.5e-08 63.2 41 68.3
Thhalv10002744m.g Eutrema salsugineum HOM05D003835 ORTHO05D004930 1.0e-07 62.0 75 40.0
SalBow5G4492 Salvia bowleyana HOM05D010617 ORTHO05D011805 1.0e-07 62.0 126 31.0
SalBow8G4289 Salvia bowleyana HOM05D010617 ORTHO05D011805 1.0e-07 62.0 126 34.1
SalBow5G3953 Salvia bowleyana HOM05D010617 ORTHO05D011805 1.7e-07 61.2 126 31.0
BcaC02g10605 Brassica carinata HOM05D003835 ORTHO05D004930 2.2e-07 60.8 95 41.1
SalBow5G1224 Salvia bowleyana HOM05D010617 ORTHO05D011805 2.2e-07 60.8 97 32.0
SalBow5G2537 Salvia bowleyana HOM05D010617 ORTHO05D011805 2.2e-07 60.8 97 32.0
BraA09t38710Z Brassica rapa HOM05D003835 ORTHO05D019916 2.9e-07 60.5 96 38.5
CANSAT01G2276 Cannabis sativa HOM05D014149 ORTHO05D011451 3.8e-07 60.1 88 35.2
BraA05t21178Z Brassica rapa HOM05D003835 ORTHO05D004930 5.0e-07 59.7 134 32.8
BraA08t32793Z Brassica rapa HOM05D007458 ORTHO05D009533 5.0e-07 59.7 87 33.3
BcaB03g16388 Brassica carinata HOM05D003835 ORTHO05D004930 6.5e-07 59.3 86 37.2
BcaB08g35260 Brassica carinata HOM05D003835 ORTHO05D004930 8.5e-07 58.9 72 48.6
SalBow5G1603 Salvia bowleyana HOM05D010617 ORTHO05D011805 1.4e-06 58.2 97 32.0
BcaC09g49627 Brassica carinata HOM05D003835 ORTHO05D004930 2.5e-06 57.4 83 42.2
BcaC04g20885 Brassica carinata HOM05D003835 ORTHO05D004930 3.2e-06 57.0 102 36.3
CANSAT54G1078 Cannabis sativa HOM05D012521 ORTHO05D011451 4.2e-06 56.6 112 29.5
BolC3t19107H Brassica oleracea HOM05D003835 ORTHO05D004930 9.4e-06 55.5 38 65.8
Cfa010421 Carpinus fangiana HOM05D026864 ORTHO05D000116 9.4e-06 55.5 99 37.4


User provided reference genes

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