Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g36451 Brassica carinata HOM05D003348 ORTHO05D010016 2.5e-210 735.3 379 100.0
BolC7t40801H Brassica oleracea HOM05D003348 ORTHO05D010016 6.9e-104 381.7 279 75.6
BcaC02g11615 Brassica carinata HOM05D003348 ORTHO05D010016 2.0e-103 380.2 338 66.0
BcaC04g20417 Brassica carinata HOM05D003348 ORTHO05D010016 9.0e-96 354.8 252 77.4
BcaC04g20110 Brassica carinata HOM05D006890 ORTHO05D009907 5.7e-90 335.5 546 43.2
C05p18920 Brassica napus HOM05D003348 ORTHO05D010016 1.8e-88 330.5 246 73.6
BcaC05g28875 Brassica carinata HOM05D003348 ORTHO05D010016 2.2e-86 323.6 490 47.6
BcaC07g37267 Brassica carinata HOM05D003348 ORTHO05D010016 2.1e-84 317.0 246 71.1
BcaC02g10517 Brassica carinata HOM05D003348 ORTHO05D010016 3.9e-83 312.8 209 80.9
BcaC06g36007 Brassica carinata HOM05D003348 ORTHO05D010016 3.9e-83 312.8 255 67.8
C09p43770 Brassica napus HOM05D003348 ORTHO05D010016 5.1e-83 312.4 506 44.3
BolC9t57261H Brassica oleracea HOM05D003348 ORTHO05D010016 8.8e-83 311.6 506 44.3
A02p04450 Brassica napus HOM05D003348 ORTHO05D010016 4.4e-82 309.3 341 56.3
C07p04070 Brassica napus HOM05D003348 ORTHO05D010016 6.9e-80 302.0 294 59.9
BcaB05g22915 Brassica carinata HOM05D003348 ORTHO05D010016 4.7e-76 289.3 563 38.7
C04p13150 Brassica napus HOM05D003348 ORTHO05D010016 1.5e-74 284.3 178 82.0
A01p32750 Brassica napus HOM05D003348 ORTHO05D010016 9.7e-74 281.6 214 70.6
BcaC05g28880 Brassica carinata HOM05D003348 ORTHO05D010016 1.7e-73 280.8 277 59.9
BolC6t38448H Brassica oleracea HOM05D003348 ORTHO05D010016 2.2e-73 280.4 303 56.1
BcaC03g16941 Brassica carinata HOM05D003348 ORTHO05D010016 1.4e-72 277.7 468 43.2
BcaC03g16878 Brassica carinata HOM05D003348 ORTHO05D010016 5.2e-67 259.2 251 62.5
C07p09080 Brassica napus HOM05D003348 ORTHO05D010016 6.7e-67 258.8 400 45.8
BraA03t15649Z Brassica rapa HOM05D003348 ORTHO05D010016 2.0e-66 257.3 180 76.1
BolC7t41316H Brassica oleracea HOM05D003348 ORTHO05D010016 2.2e-65 253.8 256 59.4
BraA05t21730Z Brassica rapa HOM05D003348 ORTHO05D010016 1.3e-62 244.6 360 47.5
C03p71560 Brassica napus HOM05D003348 ORTHO05D010016 3.8e-62 243.0 146 85.6
BolC1t02733H Brassica oleracea HOM05D003348 ORTHO05D010016 2.5e-61 240.4 545 37.6
BcaB07g33116 Brassica carinata HOM05D003348 ORTHO05D010016 4.7e-60 236.1 178 66.9
BcaB06g26643 Brassica carinata HOM05D003348 ORTHO05D010016 6.1e-60 235.7 152 77.0
BolC8t47537H Brassica oleracea HOM05D003348 ORTHO05D010016 1.4e-59 234.6 302 52.6
BcaC02g08685 Brassica carinata HOM05D003348 ORTHO05D010016 5.2e-59 232.6 290 49.7
A03p65970 Brassica napus HOM05D003348 ORTHO05D010016 5.2e-59 232.6 401 43.1
BcaC01g00111 Brassica carinata HOM05D003348 ORTHO05D010016 3.7e-57 226.5 351 45.6
BolC8t46861H Brassica oleracea HOM05D003348 ORTHO05D010016 3.7e-57 226.5 391 44.5
BcaB01g01113 Brassica carinata HOM05D003348 ORTHO05D010016 1.4e-56 224.6 149 74.5
C01p28000 Brassica napus HOM05D003348 ORTHO05D010016 1.0e-54 218.4 421 41.3
BraA06t26263Z Brassica rapa HOM05D003348 ORTHO05D011028 2.8e-52 210.3 441 40.6
C06p33300 Brassica napus HOM05D006890 ORTHO05D009907 3.6e-52 209.9 184 67.9
BcaC08g45318 Brassica carinata HOM05D006890 ORTHO05D009907 2.0e-50 204.1 188 64.9
A03p49040 Brassica napus HOM05D003348 ORTHO05D010016 2.0e-50 204.1 226 54.4
A04p08260 Brassica napus HOM05D003348 ORTHO05D010016 4.4e-50 203.0 130 78.5
C06p29220 Brassica napus HOM05D003348 ORTHO05D010016 7.5e-50 202.2 461 38.0
BcaNung05402 Brassica carinata HOM05D006890 ORTHO05D009907 2.4e-48 197.2 140 77.1
A09p59860 Brassica napus HOM05D003348 ORTHO05D011028 5.4e-48 196.1 232 55.6
BcaC05g27372 Brassica carinata HOM05D003348 ORTHO05D010016 7.0e-48 195.7 180 61.1
BcaC06g36530 Brassica carinata HOM05D006890 ORTHO05D009907 2.0e-47 194.1 139 77.0
BcaC05g25941 Brassica carinata HOM05D003348 ORTHO05D010016 3.5e-47 193.4 147 71.4
BcaB06g26670 Brassica carinata HOM05D003348 ORTHO05D010016 1.0e-46 191.8 352 42.0
C04p13180 Brassica napus HOM05D006890 ORTHO05D009907 2.3e-46 190.7 138 76.1
C09p50420 Brassica napus HOM05D003348 ORTHO05D010016 6.6e-46 189.1 324 43.2
BcaB07g33152 Brassica carinata HOM05D003348 ORTHO05D010016 8.6e-46 188.7 446 35.4
BolC4t24341H Brassica oleracea HOM05D003348 ORTHO05D011028 4.3e-45 186.4 347 41.5
BolC9t57897H Brassica oleracea HOM05D003348 ORTHO05D010016 1.2e-44 184.9 496 34.5
BcaC03g16943 Brassica carinata HOM05D006890 ORTHO05D009907 1.4e-43 181.4 187 60.4
BcaB05g23930 Brassica carinata HOM05D003348 ORTHO05D010016 1.8e-43 181.0 253 46.2
BcaB03g16334 Brassica carinata HOM05D003348 ORTHO05D010016 6.8e-43 179.1 254 44.1
BcaC02g11614 Brassica carinata HOM05D006890 ORTHO05D009907 6.8e-43 179.1 184 60.9
C09p24810 Brassica napus HOM05D003348 ORTHO05D010016 6.8e-43 179.1 127 73.2
BcaC07g42527 Brassica carinata HOM05D003348 ORTHO05D009907 1.2e-42 178.3 652 28.2
C03p65080 Brassica napus HOM05D006890 ORTHO05D009907 2.0e-42 177.6 169 62.7
BcaC06g36006 Brassica carinata HOM05D006890 ORTHO05D009907 4.4e-42 176.4 154 67.5
BcaC03g13688 Brassica carinata HOM05D006890 ORTHO05D009907 1.3e-41 174.9 164 61.6
C05p18950 Brassica napus HOM05D006890 ORTHO05D000421 2.2e-41 174.1 183 57.9
A05p28530 Brassica napus HOM05D006890 ORTHO05D009907 3.7e-41 173.3 175 60.0
BcaC04g20415 Brassica carinata HOM05D006890 ORTHO05D009907 4.9e-41 172.9 181 59.1
A01p32770 Brassica napus HOM05D006890 ORTHO05D009907 1.4e-40 171.4 175 59.4
BraA02t07591Z Brassica rapa HOM05D003348 ORTHO05D010016 7.0e-40 169.1 179 56.4
BcaC03g16877 Brassica carinata HOM05D006890 ORTHO05D009907 7.8e-39 165.6 183 57.9
BolC9t57262H Brassica oleracea HOM05D006890 ORTHO05D009907 7.8e-39 165.6 154 63.6
A04p10090 Brassica napus HOM05D003348 ORTHO05D010016 1.0e-38 165.2 251 44.6
C09p43780 Brassica napus HOM05D006890 ORTHO05D009907 1.0e-38 165.2 154 62.3
BraA04t16864Z Brassica rapa HOM05D003348 ORTHO05D010016 1.0e-38 165.2 251 44.6
BcaB03g16335 Brassica carinata HOM05D003348 ORTHO05D010016 1.9e-37 161.0 182 54.9
C07p03240 Brassica napus HOM05D006890 ORTHO05D009907 1.9e-37 161.0 164 62.8
C05p60060 Brassica napus HOM05D006890 ORTHO05D009907 5.6e-37 159.5 131 71.0
BcaB07g32279 Brassica carinata HOM05D003348 ORTHO05D010016 1.2e-36 158.3 389 35.0
A10p18440 Brassica napus HOM05D003348 ORTHO05D010016 6.2e-36 156.0 287 42.2
BolC6t38445H Brassica oleracea HOM05D006890 ORTHO05D009907 1.1e-35 155.2 180 57.8
BcaC04g20095 Brassica carinata HOM05D006890 ORTHO05D000421 2.3e-35 154.1 243 43.2
BcaC01g00112 Brassica carinata HOM05D006890 ORTHO05D009907 1.2e-34 151.8 162 57.4
BcaC05g25944 Brassica carinata HOM05D006890 ORTHO05D009907 4.4e-34 149.8 117 70.9
A10p18450 Brassica napus HOM05D006890 ORTHO05D024497 7.5e-34 149.1 142 62.7
C04p27970 Brassica napus HOM05D003348 ORTHO05D011028 2.9e-33 147.1 316 39.9
C07p09090 Brassica napus HOM05D006890 ORTHO05D009907 2.9e-33 147.1 162 60.5
A02p04460 Brassica napus HOM05D006890 ORTHO05D009907 7.0e-32 142.5 137 62.0
BcaC05g27371 Brassica carinata HOM05D006890 ORTHO05D009907 2.1e-31 141.0 126 65.1
BcaC04g19718 Brassica carinata HOM05D006890 ORTHO05D009907 1.3e-30 138.3 147 59.2
C02p47770 Brassica napus HOM05D006890 ORTHO05D009907 2.3e-30 137.5 127 63.0
BraA09t39940Z Brassica rapa HOM05D006890 ORTHO05D009907 2.3e-30 137.5 102 72.5
A09p59830 Brassica napus HOM05D006890 ORTHO05D009907 5.1e-30 136.3 101 73.3
C09p53250 Brassica napus HOM05D006890 ORTHO05D009907 5.2e-27 126.3 178 48.3
BolC9t58199H Brassica oleracea HOM05D006890 ORTHO05D009907 5.2e-27 126.3 178 48.3
BcaB01g01117 Brassica carinata HOM05D006890 ORTHO05D009907 5.8e-26 122.9 155 50.3
BraA05t21729Z Brassica rapa HOM05D006890 ORTHO05D009907 1.7e-25 121.3 154 54.5
C06p34230 Brassica napus HOM05D006890 ORTHO05D040102 2.9e-25 120.6 659 28.2
BcaB06g26669 Brassica carinata HOM05D006890 ORTHO05D009907 4.9e-25 119.8 123 54.5
C05p50020 Brassica napus HOM05D003348 ORTHO05D009907 2.4e-24 117.5 109 66.1
BraA06t26265Z Brassica rapa HOM05D006890 ORTHO05D009907 2.4e-24 117.5 146 54.8
A09p62220 Brassica napus HOM05D006890 ORTHO05D009907 3.2e-24 117.1 146 54.8
BcaC05g28879 Brassica carinata HOM05D006890 ORTHO05D009907 4.1e-24 116.7 106 67.0
BcaB01g01109 Brassica carinata HOM05D006890 ORTHO05D009907 2.1e-23 114.4 124 52.4
BolC8t46862H Brassica oleracea HOM05D006890 ORTHO05D009907 1.0e-22 112.1 75 76.0
BcaB04g19403 Brassica carinata HOM05D003348 ORTHO05D010016 1.7e-22 111.3 206 40.3
BcaB08g34800 Brassica carinata HOM05D006890 ORTHO05D000421 1.7e-22 111.3 207 37.7
A04p11990 Brassica napus HOM05D003348 ORTHO05D011028 2.3e-22 110.9 227 38.8
BraA09t38032Z Brassica rapa HOM05D003348 ORTHO05D010016 3.0e-22 110.5 234 41.0
BcaB01g02579 Brassica carinata HOM05D006890 ORTHO05D009907 5.1e-22 109.8 123 51.2
C07p04060 Brassica napus HOM05D006890 ORTHO05D009907 8.6e-22 109.0 128 53.1
BolC2t06969H Brassica oleracea HOM05D006890 ORTHO05D009907 1.1e-21 108.6 52 94.2
BcaB07g30573 Brassica carinata HOM05D006890 ORTHO05D009907 1.5e-21 108.2 156 46.8
BcaB04g19404 Brassica carinata HOM05D003591 ORTHO05D009907 4.3e-21 106.7 100 59.0
BcaB08g35587 Brassica carinata HOM05D006890 ORTHO05D009907 9.5e-21 105.5 92 59.8
BolC6t38083H Brassica oleracea HOM05D006890 ORTHO05D033100 9.5e-21 105.5 70 81.4
BcaB01g00357 Brassica carinata HOM05D006890 ORTHO05D009907 1.2e-20 105.1 194 40.2
A09p62230 Brassica napus HOM05D006890 ORTHO05D000421 6.2e-20 102.8 101 58.4
C03p32970 Brassica napus HOM05D003348 ORTHO05D010016 6.2e-20 102.8 101 58.4
C06p05210 Brassica napus HOM05D006890 ORTHO05D009907 1.1e-19 102.1 135 57.0
C02p48470 Brassica napus HOM05D006890 ORTHO05D009907 1.4e-19 101.7 139 50.4
C02p47780 Brassica napus HOM05D003348 ORTHO05D010016 6.8e-19 99.4 80 67.5
BolC2t10813H Brassica oleracea HOM05D003348 ORTHO05D010016 6.8e-19 99.4 80 67.5
BcaC08g45319 Brassica carinata HOM05D003348 ORTHO05D010016 1.2e-18 98.6 78 67.9
BcaB06g26696 Brassica carinata HOM05D006890 ORTHO05D000421 1.5e-18 98.2 100 55.0
BcaC06g36529 Brassica carinata HOM05D003348 ORTHO05D010016 2.2e-17 94.4 80 66.2
BraA03t15650Z Brassica rapa HOM05D003348 ORTHO05D010016 2.2e-17 94.4 85 64.7
C09p44080 Brassica napus HOM05D003348 ORTHO05D010016 2.9e-17 94.0 80 63.8
BolC5t34659H Brassica oleracea HOM05D006890 ORTHO05D009907 4.9e-17 93.2 115 56.5
BcaB07g33117 Brassica carinata HOM05D003591 ORTHO05D009907 1.1e-16 92.0 52 80.8
BcaB08g35588 Brassica carinata HOM05D006890 ORTHO05D000421 3.2e-16 90.5 146 43.8
C03p71550 Brassica napus HOM05D003348 ORTHO05D010016 5.4e-16 89.7 53 88.7
C09p53240 Brassica napus HOM05D006890 ORTHO05D009907 9.2e-16 89.0 89 59.6
BolC9t57896H Brassica oleracea HOM05D006890 ORTHO05D009907 9.2e-16 89.0 131 45.8
C09p50410 Brassica napus HOM05D006890 ORTHO05D009907 4.6e-15 86.7 126 46.0
BcaB05g22914 Brassica carinata HOM05D006890 ORTHO05D000421 7.8e-15 85.9 124 41.9
C01p27980 Brassica napus HOM05D006890 ORTHO05D009907 1.0e-14 85.5 157 42.0
C02p48440 Brassica napus HOM05D003348 ORTHO05D010016 1.7e-14 84.7 81 59.3
BcaC04g19717 Brassica carinata HOM05D006890 ORTHO05D009907 5.1e-14 83.2 100 52.0
BcaC02g10516 Brassica carinata HOM05D006890 ORTHO05D009907 8.7e-14 82.4 57 73.7
BraA01t03402Z Brassica rapa HOM05D003348 ORTHO05D010016 4.3e-13 80.1 41 95.1
BcaC05g25940 Brassica carinata HOM05D003348 ORTHO05D039563 1.2e-10 72.0 72 65.3
BolC5t30593H Brassica oleracea HOM05D006890 ORTHO05D009907 1.2e-10 72.0 104 48.1
BcaB08g34799 Brassica carinata HOM05D006890 ORTHO05D000421 1.5e-10 71.6 139 40.3
C06p29210 Brassica napus HOM05D006890 ORTHO05D009907 1.7e-09 68.2 94 46.8
SpUn0002_0500 Schrenkiella parvula HOM05D003348 ORTHO05D010016 2.9e-09 67.4 62 50.0
BolC4t24342H Brassica oleracea HOM05D003348 ORTHO05D010016 6.4e-09 66.2 64 59.4
BolC7t40723H Brassica oleracea HOM05D003348 ORTHO05D040102 8.4e-09 65.9 91 48.4
BcaB06g28181 Brassica carinata HOM05D006890 ORTHO05D009907 1.4e-08 65.1 195 30.3
BolC2t10874H Brassica oleracea HOM05D003348 ORTHO05D010016 1.9e-08 64.7 69 60.9
Aa31sc510G40 Aethionema arabicum HOM05D003348 ORTHO05D000395 3.2e-08 63.9 163 24.5
BolC2t10873H Brassica oleracea HOM05D003348 ORTHO05D011028 4.2e-08 63.5 34 97.1
C09p24820 Brassica napus HOM05D003348 ORTHO05D010016 5.4e-08 63.2 35 85.7
C09p44070 Brassica napus HOM05D003348 ORTHO05D010016 5.4e-08 63.2 35 85.7
BraA09t39939Z Brassica rapa HOM05D003348 ORTHO05D011028 9.3e-08 62.4 34 94.1
C02p48430 Brassica napus HOM05D003348 ORTHO05D011028 1.2e-07 62.0 37 86.5
BolC6t38087H Brassica oleracea HOM05D003348 ORTHO05D010016 1.2e-07 62.0 37 86.5
BolC6t38449H Brassica oleracea HOM05D003348 ORTHO05D011028 1.2e-07 62.0 37 86.5
C07p03250 Brassica napus HOM05D003348 ORTHO05D011028 1.6e-07 61.6 37 83.8
C03p65070 Brassica napus HOM05D003348 ORTHO05D011028 2.1e-07 61.2 37 83.8
C07p41030 Brassica napus HOM05D003348 ORTHO05D011028 2.1e-07 61.2 37 83.8
C08p06960 Brassica napus HOM05D003348 ORTHO05D011028 2.1e-07 61.2 32 100.0
C05p49980 Brassica napus HOM05D003348 ORTHO05D011028 4.6e-07 60.1 68 58.8
C09p44060 Brassica napus HOM05D003348 ORTHO05D010016 4.6e-07 60.1 37 83.8
BolC3t19447H Brassica oleracea HOM05D003348 ORTHO05D010016 4.6e-07 60.1 37 83.8
BolC6t38086H Brassica oleracea HOM05D003348 ORTHO05D010016 6.0e-07 59.7 33 84.8
BraA03t15651Z Brassica rapa HOM05D003348 ORTHO05D011028 1.3e-06 58.5 37 81.1
Carub.0001s3341 Capsella rubella HOM05D003348 ORTHO05D011028 1.7e-06 58.2 119 34.5
Carub.0001s3404 Capsella rubella HOM05D003348 ORTHO05D000395 8.7e-06 55.8 59 50.8


User provided reference genes

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