Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g36329 Brassica carinata HOM05D001498 ORTHO05D096194 1.2e-93 347.1 252 100.0
BolC4t23616H Brassica oleracea HOM05D001498 ORTHO05D016694 2.4e-70 269.6 263 83.7
BcaC06g35524 Brassica carinata HOM05D001498 ORTHO05D016694 3.1e-70 269.2 263 78.7
C04p20860 Brassica napus HOM05D001498 ORTHO05D016694 1.2e-69 267.3 263 83.3
BolC9t57107H Brassica oleracea HOM05D001498 ORTHO05D016694 7.7e-69 264.6 263 83.3
BcaC02g11068 Brassica carinata HOM05D001498 ORTHO05D016694 1.3e-68 263.8 263 80.2
C09p42290 Brassica napus HOM05D001498 ORTHO05D016694 2.2e-68 263.1 263 82.9
C07p13940 Brassica napus HOM05D001379 ORTHO05D001277 4.8e-55 218.8 234 76.5
BcaC04g20545 Brassica carinata HOM05D001498 ORTHO05D016694 8.2e-55 218.0 250 58.8
BolC7t40930H Brassica oleracea HOM05D001379 ORTHO05D016694 6.1e-50 201.8 120 90.8
BcaC05g27663 Brassica carinata HOM05D001498 ORTHO05D090842 3.4e-48 196.1 182 64.3
BolC1t03834H Brassica oleracea HOM05D001379 ORTHO05D001277 2.2e-47 193.4 234 70.1
C01p38770 Brassica napus HOM05D001379 ORTHO05D001277 6.3e-47 191.8 234 69.7
BcaB02g10765 Brassica carinata HOM05D001498 ORTHO05D095468 7.0e-46 188.3 176 65.3
BcaC04g20544 Brassica carinata HOM05D001498 ORTHO05D016694 2.7e-42 176.4 250 53.6
BcaC06g35064 Brassica carinata HOM05D001498 ORTHO05D016694 6.3e-39 165.2 118 79.7
BolC5t31266H Brassica oleracea HOM05D001498 ORTHO05D019959 3.4e-32 142.9 169 52.7
BcaC02g11926 Brassica carinata HOM05D001498 ORTHO05D019959 1.5e-24 117.5 103 60.2
BcaB02g11218 Brassica carinata HOM05D001224 ORTHO05D010571 2.2e-23 113.6 138 51.4
C07p06210 Brassica napus HOM05D001498 ORTHO05D032253 7.0e-22 108.6 156 48.1
BolC7t41038H Brassica oleracea HOM05D001498 ORTHO05D032253 9.2e-22 108.2 156 48.1
C05p25290 Brassica napus HOM05D001498 ORTHO05D019959 1.0e-20 104.8 97 61.9
BcaC06g36230 Brassica carinata HOM05D001498 ORTHO05D032253 8.6e-20 101.7 149 47.7
BcaB01g01185 Brassica carinata HOM05D001498 ORTHO05D019959 5.6e-19 99.0 99 55.6
BcaB04g17776 Brassica carinata HOM05D001498 ORTHO05D092868 1.8e-17 94.0 143 44.8
BcaB06g27205 Brassica carinata HOM05D001498 ORTHO05D091204 1.2e-16 91.3 90 55.6
C02p39460 Brassica napus HOM05D008414 ORTHO05D014108 2.0e-16 90.5 288 48.6
BcaB05g23077 Brassica carinata HOM05D001498 ORTHO05D091436 5.8e-16 89.0 89 51.7
BcaB04g17785 Brassica carinata HOM05D003591 ORTHO05D094524 2.2e-15 87.0 96 53.1
BcaB07g32989 Brassica carinata HOM05D001498 ORTHO05D008559 2.2e-15 87.0 134 45.5
BcaB05g22880 Brassica carinata HOM05D001498 ORTHO05D019959 3.7e-15 86.3 98 54.1
BcaB01g01484 Brassica carinata HOM05D001498 ORTHO05D091615 6.4e-15 85.5 136 42.6
BcaB07g33217 Brassica carinata HOM05D001498 ORTHO05D093085 1.9e-14 84.0 89 53.9
BcaB01g03187 Brassica carinata HOM05D001498 ORTHO05D090608 2.4e-14 83.6 131 43.5
BcaB04g17678 Brassica carinata HOM05D001498 ORTHO05D094760 4.1e-14 82.8 129 42.6
BcaB07g33084 Brassica carinata HOM05D001498 ORTHO05D092207 4.1e-14 82.8 111 50.5
BcaB06g26727 Brassica carinata HOM05D001498 ORTHO05D093134 7.1e-14 82.0 110 48.2
BcaB07g32913 Brassica carinata HOM05D001498 ORTHO05D091922 7.1e-14 82.0 86 50.0
BcaB07g33315 Brassica carinata HOM05D001498 ORTHO05D091495 7.1e-14 82.0 107 43.9
BcaB03g16152 Brassica carinata HOM05D001498 ORTHO05D093112 1.6e-13 80.9 107 46.7
BcaB05g22943 Brassica carinata HOM05D001498 ORTHO05D096110 2.1e-13 80.5 86 48.8
BcaB05g23244 Brassica carinata HOM05D001498 ORTHO05D095601 4.6e-13 79.3 94 53.2
BcaB07g33213 Brassica carinata HOM05D001498 ORTHO05D090837 6.0e-13 79.0 74 59.5
BcaB06g27273 Brassica carinata HOM05D001498 ORTHO05D094467 7.8e-13 78.6 110 48.2
BcaB04g18314 Brassica carinata HOM05D001498 ORTHO05D095953 1.3e-12 77.8 81 49.4
BcaB07g33220 Brassica carinata HOM05D001498 ORTHO05D096371 1.3e-12 77.8 97 45.4
BcaB01g01816 Brassica carinata HOM05D001498 ORTHO05D091844 2.3e-12 77.0 104 50.0
BcaB05g23120 Brassica carinata HOM05D001498 ORTHO05D090647 2.3e-12 77.0 126 43.7
BcaB05g23246 Brassica carinata HOM05D001498 ORTHO05D090900 2.3e-12 77.0 85 48.2
BcaB01g01371 Brassica carinata HOM05D001498 ORTHO05D091381 3.0e-12 76.6 178 38.8
BcaB08g35016 Brassica carinata HOM05D001498 ORTHO05D092631 3.9e-12 76.3 118 39.0
BcaB06g26648 Brassica carinata HOM05D001498 ORTHO05D094209 6.6e-12 75.5 135 35.6
BcaB07g33754 Brassica carinata HOM05D001498 ORTHO05D092729 8.6e-12 75.1 68 54.4
C06p31050 Brassica napus HOM05D001498 ORTHO05D011506 8.6e-12 75.1 107 43.0
BcaB07g33085 Brassica carinata HOM05D001498 ORTHO05D095625 1.1e-11 74.7 139 38.1
C03p66370 Brassica napus HOM05D001498 ORTHO05D011506 1.1e-11 74.7 107 43.0
BcaB06g26678 Brassica carinata HOM05D001498 ORTHO05D094527 1.5e-11 74.3 74 55.4
C09p27470 Brassica napus HOM05D001498 ORTHO05D011506 1.9e-11 73.9 107 43.0
BcaB04g17490 Brassica carinata HOM05D001498 ORTHO05D019959 2.5e-11 73.6 72 54.2
BcaB02g11279 Brassica carinata HOM05D001498 ORTHO05D095830 5.6e-11 72.4 87 44.8
BolC2t09959H Brassica oleracea HOM05D008414 ORTHO05D033195 7.3e-11 72.0 248 50.4
BcaB06g26483 Brassica carinata HOM05D001498 ORTHO05D095599 1.6e-10 70.9 129 37.2
BcaC05g27519 Brassica carinata HOM05D001498 ORTHO05D011506 1.6e-10 70.9 107 41.1
C01p30520 Brassica napus HOM05D001498 ORTHO05D001885 2.1e-10 70.5 101 41.6
C07p49110 Brassica napus HOM05D001498 ORTHO05D097837 2.1e-10 70.5 175 36.6
BolC1t02817H Brassica oleracea HOM05D001498 ORTHO05D106172 2.1e-10 70.5 107 43.0
BcaC08g44056 Brassica carinata HOM05D001498 ORTHO05D091470 2.8e-10 70.1 108 42.6
BcaC08g44373 Brassica carinata HOM05D001498 ORTHO05D011506 2.8e-10 70.1 162 37.7
C09p16580 Brassica napus HOM05D001498 ORTHO05D011506 2.8e-10 70.1 153 37.9
BcaB01g01309 Brassica carinata HOM05D001498 ORTHO05D091216 3.6e-10 69.7 76 48.7
BcaB02g11277 Brassica carinata HOM05D001498 ORTHO05D091891 4.7e-10 69.3 92 45.7
BcaB07g32352 Brassica carinata HOM05D001498 ORTHO05D021639 4.7e-10 69.3 125 40.0
C04p21380 Brassica napus HOM05D001498 ORTHO05D013028 4.7e-10 69.3 147 39.5
BolC1t03827H Brassica oleracea HOM05D001498 ORTHO05D011506 4.7e-10 69.3 144 38.2
BcaC09g50109 Brassica carinata HOM05D001498 ORTHO05D093510 1.1e-09 68.2 101 44.6
BolC2t11288H Brassica oleracea HOM05D001498 ORTHO05D011506 1.4e-09 67.8 155 38.1
BolC3t19484H Brassica oleracea HOM05D001498 ORTHO05D011506 1.4e-09 67.8 153 38.6
BcaB04g17703 Brassica carinata HOM05D001498 ORTHO05D021639 1.8e-09 67.4 95 41.1
BcaC09g48967 Brassica carinata HOM05D001498 ORTHO05D011506 1.8e-09 67.4 98 41.8
C08p17880 Brassica napus HOM05D001498 ORTHO05D001885 1.8e-09 67.4 146 39.0
C09p17600 Brassica napus HOM05D001498 ORTHO05D011506 1.8e-09 67.4 172 36.0
BcaB05g24509 Brassica carinata HOM05D001379 ORTHO05D001277 2.3e-09 67.0 63 58.7
A08p07550 Brassica napus HOM05D001498 ORTHO05D011506 2.3e-09 67.0 136 34.6
BcaB03g15933 Brassica carinata HOM05D001498 ORTHO05D021639 3.1e-09 66.6 146 36.3
BcaC02g09114 Brassica carinata HOM05D001498 ORTHO05D011506 3.1e-09 66.6 153 37.9
BcaC04g20364 Brassica carinata HOM05D001498 ORTHO05D011506 3.1e-09 66.6 98 41.8
BcaB03g16298 Brassica carinata HOM05D001498 ORTHO05D095831 4.0e-09 66.2 127 39.4
BcaC07g38657 Brassica carinata HOM05D001498 ORTHO05D011506 4.0e-09 66.2 154 39.0
BcaC05g25872 Brassica carinata HOM05D001498 ORTHO05D011506 5.2e-09 65.9 165 35.8
A01p28560 Brassica napus HOM05D001498 ORTHO05D021639 5.2e-09 65.9 73 50.7
A08p09540 Brassica napus HOM05D001498 ORTHO05D011506 5.2e-09 65.9 127 39.4
C01p48970 Brassica napus HOM05D001498 ORTHO05D011506 6.8e-09 65.5 122 41.0
BolC9t54653H Brassica oleracea HOM05D001498 ORTHO05D011506 1.2e-08 64.7 175 36.0
C03p66000 Brassica napus HOM05D001498 ORTHO05D001885 2.0e-08 63.9 172 36.6
C01p44920 Brassica napus HOM05D001498 ORTHO05D011506 2.6e-08 63.5 175 35.4
C02p52020 Brassica napus HOM05D001498 ORTHO05D011506 2.6e-08 63.5 151 37.1
C07p05300 Brassica napus HOM05D001498 ORTHO05D100683 5.8e-08 62.4 106 92.5
C04p36710 Brassica napus HOM05D001498 ORTHO05D001885 7.6e-08 62.0 139 37.4
BolC8t47367H Brassica oleracea HOM05D001498 ORTHO05D011506 7.6e-08 62.0 153 36.6
A08p06060 Brassica napus HOM05D001498 ORTHO05D011506 9.9e-08 61.6 127 38.6
C04p09850 Brassica napus HOM05D001498 ORTHO05D101798 9.9e-08 61.6 51 62.7
BcaC04g19551 Brassica carinata HOM05D001498 ORTHO05D090991 1.7e-07 60.8 163 33.7
C01p38680 Brassica napus HOM05D001498 ORTHO05D011506 1.7e-07 60.8 169 34.9
BolC8t49067H Brassica oleracea HOM05D001498 ORTHO05D011506 1.7e-07 60.8 154 38.3
C01p30560 Brassica napus HOM05D001498 ORTHO05D011506 2.2e-07 60.5 149 34.2
BolC3t17911H Brassica oleracea HOM05D001498 ORTHO05D008559 2.2e-07 60.5 175 34.9
C03p56230 Brassica napus HOM05D001498 ORTHO05D001885 2.9e-07 60.1 172 37.2
BcaB06g25736 Brassica carinata HOM05D001498 ORTHO05D021639 4.9e-07 59.3 77 44.2
A03p54380 Brassica napus HOM05D001498 ORTHO05D011506 4.9e-07 59.3 168 33.3
BcaB06g26755 Brassica carinata HOM05D001498 ORTHO05D092466 6.4e-07 58.9 77 42.9
BcaB03g16624 Brassica carinata HOM05D008414 ORTHO05D095320 8.3e-07 58.5 113 41.6
BraA08t32774Z Brassica rapa HOM05D001498 ORTHO05D001885 1.1e-06 58.2 136 33.1
BcaB08g35076 Brassica carinata HOM05D001498 ORTHO05D021639 1.4e-06 57.8 113 38.9
BraA03t15290Z Brassica rapa HOM05D001498 ORTHO05D011506 1.4e-06 57.8 166 32.5
C02p53500 Brassica napus HOM05D001498 ORTHO05D001885 1.9e-06 57.4 169 33.7
BcaB08g35461 Brassica carinata HOM05D001498 ORTHO05D090491 2.4e-06 57.0 115 38.3
BcaB04g18432 Brassica carinata HOM05D001498 ORTHO05D090882 5.4e-06 55.8 118 39.0
BcaB06g25739 Brassica carinata HOM05D001498 ORTHO05D093323 5.4e-06 55.8 116 37.9


User provided reference genes

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