Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g36249 Brassica carinata HOM05D004231 ORTHO05D004814 6.2e-161 570.9 313 100.0
C07p06030 Brassica napus HOM05D004231 ORTHO05D004814 1.4e-141 506.5 317 91.2
BcaB03g16478 Brassica carinata HOM05D004231 ORTHO05D004814 1.9e-141 506.1 315 91.7
BolC7t41016H Brassica oleracea HOM05D004231 ORTHO05D004814 1.9e-141 506.1 315 91.7
A07p03760 Brassica napus HOM05D004231 ORTHO05D004814 2.7e-140 502.3 317 90.2
BraA07t28164Z Brassica rapa HOM05D004231 ORTHO05D004814 2.7e-140 502.3 317 90.2
C09p13290 Brassica napus HOM05D004231 ORTHO05D004814 7.4e-138 494.2 317 88.3
BcaB07g31737 Brassica carinata HOM05D004231 ORTHO05D004814 1.3e-137 493.4 317 88.6
BcaC04g22982 Brassica carinata HOM05D004231 ORTHO05D004814 1.6e-137 493.0 317 88.0
BolC9t54222H Brassica oleracea HOM05D004231 ORTHO05D004814 1.6e-137 493.0 317 88.0
BcaB03g16474 Brassica carinata HOM05D004231 ORTHO05D004814 2.8e-137 492.3 317 88.6
A09p11260 Brassica napus HOM05D004231 ORTHO05D004814 6.3e-137 491.1 317 87.4
BraA09t36767Z Brassica rapa HOM05D004231 ORTHO05D004814 6.3e-137 491.1 317 87.4
Sp3g30610 Schrenkiella parvula HOM05D004231 ORTHO05D004814 8.2e-137 490.7 317 88.0
Thhalv10022738m.g Eutrema salsugineum HOM05D004231 ORTHO05D004814 4.1e-136 488.4 317 87.7
A06p34120 Brassica napus HOM05D004231 ORTHO05D004814 3.4e-135 485.3 317 86.1
C03p58080 Brassica napus HOM05D004231 ORTHO05D004814 5.0e-134 481.5 317 86.1
BolC3t18081H Brassica oleracea HOM05D004231 ORTHO05D004814 5.0e-134 481.5 317 86.1
BcaC01g02941 Brassica carinata HOM05D004231 ORTHO05D004814 6.5e-134 481.1 317 86.1
AL3G50130 Arabidopsis lyrata HOM05D004231 ORTHO05D004814 1.4e-133 479.9 317 85.8
Carub.0003s3121 Capsella rubella HOM05D004231 ORTHO05D004814 5.5e-133 478.0 317 85.5
AT2G17265 Arabidopsis thaliana HOM05D004231 ORTHO05D004814 9.4e-133 477.2 317 85.8
BraA06t26345Z Brassica rapa HOM05D004231 ORTHO05D004814 3.6e-132 475.3 315 85.1
CARHR293610 Cardamine hirsuta HOM05D004231 ORTHO05D004814 1.1e-130 470.3 317 83.9
Aa31LG2G14870 Aethionema arabicum HOM05D004231 ORTHO05D004814 1.0e-123 447.2 315 81.0
Carub.0007s0500 Capsella rubella HOM05D004231 ORTHO05D004814 1.1e-117 427.2 314 77.7
BcaB03g16477 Brassica carinata HOM05D004231 ORTHO05D004814 5.7e-114 414.8 229 99.1
Duzib052G0175 Durio zibethinus HOM05D004231 ORTHO05D004814 6.1e-108 394.8 317 72.6
Sabra04G0139300 Salix brachista HOM05D004231 ORTHO05D004814 1.0e-107 394.0 317 72.6
QL05p043527 Quercus lobata HOM05D004231 ORTHO05D004814 1.4e-107 393.7 317 73.2
FAN15G0610 Fragaria x ananassa HOM05D004231 ORTHO05D004814 1.8e-107 393.3 317 73.8
Lsat_1_v5_gn_8_121420 Lactuca sativa HOM05D004231 ORTHO05D004814 1.8e-107 393.3 320 71.9
Potri.009G168400 Populus trichocarpa HOM05D004231 ORTHO05D004814 3.0e-107 392.5 317 73.2
FvH4_2g16830 Fragaria vesca HOM05D004231 ORTHO05D004814 4.0e-107 392.1 319 73.0
Manes.01G017200 Manihot esculenta HOM05D004231 ORTHO05D004814 8.8e-107 391.0 316 72.8
Potri.004G207000 Populus trichocarpa HOM05D004231 ORTHO05D004814 8.8e-107 391.0 317 72.9
PGR042G2635 Punica granatum HOM05D004231 ORTHO05D004814 1.2e-106 390.6 318 70.8
SGA_v2.0_scaffold36G14389 Striga asiatica HOM05D004231 ORTHO05D004814 3.3e-106 389.0 314 69.7
MSTRG.25000 Avicennia marina HOM05D004231 ORTHO05D004814 5.7e-106 388.3 317 70.7
MD10G1142000 Malus domestica HOM05D004231 ORTHO05D004814 5.7e-106 388.3 317 71.9
Solyc04g008760.3 Solanum lycopersicum HOM05D004231 ORTHO05D004814 5.7e-106 388.3 317 70.3
CSS0007201 Camellia sinensis var. sinensis HOM05D004231 ORTHO05D004814 7.5e-106 387.9 318 70.8
SalBow7G0905 Salvia bowleyana HOM05D004231 ORTHO05D004814 1.7e-105 386.7 321 69.8
Sopen04g003940 Solanum pennellii HOM05D004231 ORTHO05D004814 1.7e-105 386.7 315 70.5
FAN24G0296 Fragaria x ananassa HOM05D004231 ORTHO05D004814 2.2e-105 386.3 316 72.8
Cfa005374 Carpinus fangiana HOM05D004231 ORTHO05D004814 2.8e-105 386.0 311 72.3
RcHm_v2.0_Chr6g0280961 Rosa chinensis HOM05D004231 ORTHO05D004814 2.8e-105 386.0 317 72.9
PGSC0003DMG400025309 Solanum tuberosum HOM05D004231 ORTHO05D004814 3.7e-105 385.6 315 70.2
ClCG02G003360 Citrullus lanatus HOM05D004231 ORTHO05D004814 4.8e-105 385.2 312 72.4
Ciclev10028700m.g Citrus clementina HOM05D004231 ORTHO05D004814 4.8e-105 385.2 314 71.7
Migut.N00847 Erythranthe guttata HOM05D004231 ORTHO05D004814 4.8e-105 385.2 314 69.7
FAN27G2171 Fragaria x ananassa HOM05D004231 ORTHO05D004814 4.8e-105 385.2 314 72.6
SGA_v2.0_scaffold172G39001 Striga asiatica HOM05D004231 ORTHO05D004814 6.3e-105 384.8 314 69.7
CiPaw.06G115200 Carya illinoinensis HOM05D004231 ORTHO05D004814 8.2e-105 384.4 311 72.3
Peaxi162Scf00362g00110 Petunia axillaris HOM05D004231 ORTHO05D004814 1.1e-104 384.0 313 70.3
MELO3C015708.2 Cucumis melo HOM05D004231 ORTHO05D004814 1.4e-104 383.6 312 72.4
CsaV3_7G001970 Cucumis sativus L. HOM05D004231 ORTHO05D004814 1.4e-104 383.6 312 72.4
Prupe.8G180500 Prunus persica HOM05D004231 ORTHO05D004814 1.4e-104 383.6 317 71.3
Nitab4.5_0000783g0100 Nicotiana tabacum HOM05D004231 ORTHO05D004814 1.8e-104 383.3 317 70.7
Oeu005953.1 Olea europaea HOM05D004231 ORTHO05D004814 1.8e-104 383.3 317 70.0
CAN.G5871.1 Capsicum annuum HOM05D004231 ORTHO05D004814 2.4e-104 382.9 317 68.5
HanXRQChr16g0515121 Helianthus annuus HOM05D004231 ORTHO05D004814 2.4e-104 382.9 320 70.6
CANSAT25G0301 Cannabis sativa HOM05D004231 ORTHO05D004814 4.1e-104 382.1 316 71.2
Sc08g0002160 Simmondsia chinensis HOM05D004231 ORTHO05D004814 7.0e-104 381.3 318 69.8
Thecc.02G146400 Theobroma cacao HOM05D004231 ORTHO05D004814 1.6e-103 380.2 317 70.3
Hma1.2p1_0652F.1_g195880 Hydrangea macrophylla HOM05D004231 ORTHO05D004814 2.7e-103 379.4 317 70.3
Ca_10777_v3 Cicer arietinum L. HOM05D004231 ORTHO05D004814 3.5e-103 379.0 311 70.1
TWI75G1214 Tripterygium wilfordii HOM05D004231 ORTHO05D004814 3.5e-103 379.0 318 69.2
ECA233G1094 Erigeron canadensis HOM05D004231 ORTHO05D004814 5.9e-103 378.3 318 69.8
Sopen01g054320 Solanum pennellii HOM05D004231 ORTHO05D004814 1.0e-102 377.5 313 69.3
Dinv14175 Davidia involucrata HOM05D004231 ORTHO05D004814 5.0e-102 375.2 320 69.4
Sed0021373 Sechium edule HOM05D004231 ORTHO05D004814 6.5e-102 374.8 316 70.3
Gohir.A03G170800 Gossypium hirsutum HOM05D004231 ORTHO05D004814 8.5e-102 374.4 304 72.0
Gorai.005G216700 Gossypium raimondii HOM05D004231 ORTHO05D004814 1.1e-101 374.0 304 72.0
AUR62013177 Chenopodium quinoa HOM05D004231 ORTHO05D004814 1.9e-101 373.2 316 70.3
Gohir.D02G193900 Gossypium hirsutum HOM05D004231 ORTHO05D004814 1.9e-101 373.2 304 72.0
Actinidia17992 Actinidia chinensis HOM05D004231 ORTHO05D004814 3.2e-101 372.5 314 70.4
DCAR_006270 Daucus carota HOM05D004231 ORTHO05D004814 3.2e-101 372.5 313 69.6
Lalb_Chr12g0208621 Lupinus albus HOM05D004231 ORTHO05D004814 3.2e-101 372.5 314 69.1
LjContig00081g0001175 Lotus japonicus HOM05D004231 ORTHO05D004814 4.2e-101 372.1 314 70.1
Sed0027682 Sechium edule HOM05D004231 ORTHO05D004814 7.2e-101 371.3 316 69.9
PGSC0003DMG400014663 Solanum tuberosum HOM05D000109 ORTHO05D004814 7.2e-101 371.3 313 68.1
arahy.Tifrunner.gnm1.ann1.3XUX0K Arachis hypogaea HOM05D004231 ORTHO05D004814 2.1e-100 369.8 314 69.7
EL10Ac9g21537 Beta vulgaris HOM05D004231 ORTHO05D004814 3.6e-100 369.0 316 69.9
CDE05G2018 Ceratophyllum demersum HOM05D004231 ORTHO05D004814 4.7e-100 368.6 318 67.6
RhsimUnG0022900 Rhododendron simsii HOM05D004231 ORTHO05D004814 4.7e-100 368.6 318 67.6
unitig_0.g2083 Utricularia gibba HOM05D004231 ORTHO05D004814 4.7e-100 368.6 317 67.8
TPR.G18636 Trifolium pratense HOM05D004231 ORTHO05D004814 6.1e-100 368.2 315 68.3
TPR.G5084 Trifolium pratense HOM05D004231 ORTHO05D004814 6.1e-100 368.2 317 67.8
Ah.01g009950 Amaranthus hybridus HOM05D004231 ORTHO05D004814 8.0e-100 367.9 316 69.3
Lalb_Chr07g0189301 Lupinus albus HOM05D004231 ORTHO05D004814 8.0e-100 367.9 322 66.1
Medtr5g099180 Medicago truncatula HOM05D004231 ORTHO05D004814 1.0e-99 367.5 315 68.6
arahy.Tifrunner.gnm1.ann1.9M6UE0 Arachis hypogaea HOM05D004231 ORTHO05D004814 1.8e-99 366.7 292 73.6
Nn7g36283 Nelumbo nucifera HOM05D004231 ORTHO05D004814 3.0e-99 365.9 320 68.8
CDE05G1267 Ceratophyllum demersum HOM05D004231 ORTHO05D004814 5.2e-99 365.2 316 67.1
Nitab4.5_0008730g0040 Nicotiana tabacum HOM05D004231 ORTHO05D004814 6.8e-99 364.8 291 71.1
PSO782G1111 Papaver somniferum HOM05D004231 ORTHO05D004814 6.8e-99 364.8 321 67.0
CARHR243620 Cardamine hirsuta HOM05D004231 ORTHO05D004814 8.8e-99 364.4 245 82.0
Nitab4.5_0000129g0030 Nicotiana tabacum HOM05D004231 ORTHO05D004814 8.8e-99 364.4 291 71.1
Nn2g15251 Nelumbo nucifera HOM05D004231 ORTHO05D004814 1.5e-98 363.6 316 69.3
PSO675G1855 Papaver somniferum HOM05D004231 ORTHO05D004814 1.5e-98 363.6 324 66.4
Peaxi162Scf00329g00312 Petunia axillaris HOM05D004231 ORTHO05D004814 1.5e-98 363.6 291 71.1
PSO541G6356 Papaver somniferum HOM05D004231 ORTHO05D004814 2.0e-98 363.2 324 66.0
ECA236G1252 Erigeron canadensis HOM05D000103 ORTHO05D000049 2.6e-98 362.8 313 67.7
CSS0030147 Camellia sinensis var. sinensis HOM05D004231 ORTHO05D004814 3.4e-98 362.5 320 67.8
PSO063G5124 Papaver somniferum HOM05D004231 ORTHO05D004814 3.4e-98 362.5 321 66.7
Cc11_g00240 Coffea canephora HOM05D004231 ORTHO05D004814 1.3e-97 360.5 315 68.6
Aqoxy1G01703 Aquilegia oxysepala HOM05D004231 ORTHO05D004814 3.7e-97 359.0 317 65.9
Glyma.14G001000 Glycine max HOM05D004231 ORTHO05D004814 3.7e-97 359.0 314 67.5
MBI18_g17319_MAGBIO Magnolia biondii HOM05D004231 ORTHO05D004814 3.7e-97 359.0 321 67.0
CiPaw.05G093400 Carya illinoinensis HOM05D004231 ORTHO05D004814 8.3e-97 357.8 304 69.4
Phvul.008G292300 Phaseolus vulgaris HOM05D004231 ORTHO05D004814 8.3e-97 357.8 310 69.0
Psat2g000800 Pisum sativum HOM05D004231 ORTHO05D004814 1.1e-96 357.5 323 64.7
Lsat_1_v5_gn_4_71321 Lactuca sativa HOM05D004231 ORTHO05D004814 1.8e-96 356.7 318 61.3
Psat2g000680 Pisum sativum HOM05D004231 ORTHO05D004814 1.2e-95 354.0 315 67.3
Cpa.g.sc60.14 Carica papaya HOM05D004231 ORTHO05D004814 3.6e-92 342.4 291 70.8
ATR0177G062 Amborella trichopoda HOM05D004231 ORTHO05D004814 1.8e-91 340.1 312 64.4
HPP92_007738 Vanilla planifolia HOM05D004231 ORTHO05D004814 3.4e-90 335.9 333 61.3
SHI25239 Sapria himalayana HOM05D004231 ORTHO05D004814 3.1e-88 329.3 316 62.0
AUR62010176 Chenopodium quinoa HOM05D004231 ORTHO05D004814 2.0e-87 326.6 316 60.8
THA.LOC104807405 Tarenaya hassleriana HOM05D004231 ORTHO05D004814 2.0e-87 326.6 243 80.2
Pp3c5_14900 Physcomitrium patens HOM05D004231 ORTHO05D004814 5.6e-85 318.5 311 59.5
Mapoly0173s0009 Marchantia polymorpha HOM05D004231 ORTHO05D004814 2.3e-83 313.2 328 57.3
Os02g0831800 Oryza sativa ssp. japonica HOM05D004231 ORTHO05D004814 5.8e-82 308.5 320 58.4
Lj9P408T30 Lonicera japonica HOM05D004231 ORTHO05D004814 1.7e-78 297.0 247 72.9
GSVIVG01023624001 Vitis vinifera HOM05D004231 ORTHO05D004814 6.6e-78 295.0 317 59.9
CBR_g2798 Chara braunii HOM05D004385 ORTHO05D005245 4.3e-77 292.4 329 54.7
MBI10_g41732_MAGBIO Magnolia biondii HOM05D004231 ORTHO05D004814 1.6e-76 290.4 288 56.9
SMO351G0181 Selaginella moellendorffii HOM05D004231 ORTHO05D004814 3.1e-75 286.2 333 55.3
SEGI_38009 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 8.6e-70 268.1 233 60.5
Cre02.g082250 Chlamydomonas reinhardtii HOM05D004231 ORTHO05D004814 1.2e-66 257.7 313 51.1
COL.COLO4_34312 Corchorus olitorius HOM05D000109 ORTHO05D000520 7.5e-66 255.0 317 51.7
Atru.chr5.3561 Acer truncatum HOM05D004231 ORTHO05D004814 9.9e-66 254.6 206 68.0
MBI15_g18193_MAGBIO Magnolia biondii HOM05D004231 ORTHO05D004814 3.7e-65 252.7 310 52.6
ATR0810G109 Amborella trichopoda HOM05D004231 ORTHO05D004814 8.1e-60 235.0 299 53.2
TAR625G1260 Trochodendron aralioides HOM05D004231 ORTHO05D004814 3.8e-49 199.5 206 55.8
Cre02.g082200 Chlamydomonas reinhardtii HOM05D004231 ORTHO05D004814 3.8e-41 172.9 261 44.1
Sabra09G0130700 Salix brachista HOM05D004231 ORTHO05D004814 2.6e-34 150.2 163 58.3
Atru.chr5.3560 Acer truncatum HOM05D004231 ORTHO05D004814 3.0e-30 136.7 92 75.0
SMO231G0001 Selaginella moellendorffii HOM05D004231 ORTHO05D004814 2.5e-29 133.7 165 50.3
VMungo0331G0717 Vigna mungo HOM05D004231 ORTHO05D004814 5.3e-27 125.9 93 69.9
TAR625G0010 Trochodendron aralioides HOM05D004231 ORTHO05D004814 3.4e-26 123.2 92 66.3
Dinv20762 Davidia involucrata HOM05D004231 ORTHO05D004814 1.1e-24 118.2 130 56.9
VMungo0647G1050 Vigna mungo HOM05D004231 ORTHO05D004814 1.1e-21 108.2 84 67.9
BcaB08g34718 Brassica carinata HOM05D004231 ORTHO05D004814 8.2e-20 102.1 78 75.6
SEGI_19463 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 9.0e-19 98.6 91 53.8
arahy.Tifrunner.gnm1.ann1.H05BEB Arachis hypogaea HOM05D004231 ORTHO05D004814 3.8e-17 93.2 79 63.3
BcaB08g34717 Brassica carinata HOM05D004231 ORTHO05D004814 2.1e-15 87.4 50 84.0
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 2.7e-15 87.0 279 30.5
Actinidia26328 Actinidia chinensis HOM05D004231 ORTHO05D004814 8.8e-14 82.0 128 41.4
QL03p013131 Quercus lobata HOM05D004231 ORTHO05D004814 8.8e-14 82.0 69 59.4
QL06p003747 Quercus lobata HOM05D003236 ORTHO05D003620 7.4e-13 79.0 69 58.0
C07p31950 Brassica napus HOM05D004231 ORTHO05D004814 1.3e-12 78.2 71 62.0
BolC7t43738H Brassica oleracea HOM05D004231 ORTHO05D004814 1.7e-12 77.8 71 62.0
PRCOL_00006973 Prasinoderma coloniale HOM05D004231 ORTHO05D004814 2.2e-12 77.4 266 29.7
MCO14G367 Micromonas commoda HOM05D004231 ORTHO05D004814 2.4e-11 73.9 268 31.7
QL08p042586 Quercus lobata HOM05D004231 ORTHO05D004814 5.3e-11 72.8 77 51.9
BcaC06g34170 Brassica carinata HOM05D004231 ORTHO05D004814 1.2e-10 71.6 61 68.9
TAR625G0853 Trochodendron aralioides HOM05D000369 ORTHO05D000253 2.0e-10 70.9 177 35.6
SEGI_37911 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 1.7e-09 67.8 52 59.6
Cre02.g082150 Chlamydomonas reinhardtii HOM05D004231 ORTHO05D004814 5.0e-09 66.2 67 50.7
BcaB08g35109 Brassica carinata HOM05D004231 ORTHO05D004814 2.1e-07 60.8 43 72.1
Ah.03g140200 Amaranthus hybridus HOM05D004231 ORTHO05D004814 3.0e-06 57.0 67 70.1
AT4G35295 Arabidopsis thaliana HOM05D004231 ORTHO05D004814 3.9e-06 56.6 63 60.3


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