Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g36153 Brassica carinata HOM05D002676 ORTHO05D032238 1.9e-69 265.8 142 100.0
Sp7g25510 Schrenkiella parvula HOM05D002676 ORTHO05D003194 2.9e-33 145.6 173 54.3
BcaNung07039 Brassica carinata HOM05D002676 ORTHO05D003194 1.5e-32 143.3 173 53.8
C01p23730 Brassica napus HOM05D002676 ORTHO05D003194 1.5e-32 143.3 173 53.8
BolC1t02325H Brassica oleracea HOM05D002676 ORTHO05D003194 1.5e-32 143.3 173 53.8
BraA01t01823Z Brassica rapa HOM05D002676 ORTHO05D003194 3.2e-32 142.1 173 53.2
A01p18790 Brassica napus HOM05D002676 ORTHO05D003194 9.4e-32 140.6 173 52.6
Thhalv10025217m.g Eutrema salsugineum HOM05D002676 ORTHO05D003194 4.4e-29 131.7 173 49.7
C07p07180 Brassica napus HOM05D002676 ORTHO05D032238 1.6e-26 123.2 90 77.8
BolC7t41137H Brassica oleracea HOM05D002676 ORTHO05D032238 1.6e-26 123.2 90 77.8
Rhsim03G0217600 Rhododendron simsii HOM05D002676 ORTHO05D003194 7.7e-26 120.9 171 50.3
AL7G25170 Arabidopsis lyrata HOM05D002676 ORTHO05D003194 1.0e-25 120.6 176 46.6
Nitab4.5_0000021g0130 Nicotiana tabacum HOM05D002676 ORTHO05D003194 1.0e-25 120.6 83 78.3
Nitab4.5_0004582g0060 Nicotiana tabacum HOM05D002676 ORTHO05D003194 1.0e-25 120.6 83 78.3
PGSC0003DMG400000577 Solanum tuberosum HOM05D002676 ORTHO05D003194 2.2e-25 119.4 83 77.1
CSS0034101 Camellia sinensis var. sinensis HOM05D002676 ORTHO05D003194 1.9e-24 116.3 147 53.1
Oeu055417.1 Olea europaea HOM05D002676 ORTHO05D003194 1.9e-24 116.3 164 50.0
Oeu061042.4 Olea europaea HOM05D002676 ORTHO05D003194 9.4e-24 114.0 85 70.6
AT4G27585 Arabidopsis thaliana HOM05D002676 ORTHO05D003194 1.6e-23 113.2 176 44.3
Hma1.2p1_0415F.1_g148330 Hydrangea macrophylla HOM05D002676 ORTHO05D003194 3.6e-23 112.1 155 50.3
Migut.F00973 Erythranthe guttata HOM05D002676 ORTHO05D003194 2.3e-22 109.4 157 47.8
CARHR235280 Cardamine hirsuta HOM05D002676 ORTHO05D003194 1.2e-21 107.1 173 45.1
Carub.0007s1328 Capsella rubella HOM05D002676 ORTHO05D003194 2.6e-21 105.9 173 45.1
SalBow4G0400 Salvia bowleyana HOM05D002676 ORTHO05D003194 7.5e-21 104.4 169 47.3
SalBow4G1608 Salvia bowleyana HOM05D002676 ORTHO05D003194 7.5e-21 104.4 169 47.3
Dinv17285 Davidia involucrata HOM05D002676 ORTHO05D009413 8.6e-17 90.9 83 63.9
MBI12_g30149_MAGBIO Magnolia biondii HOM05D002676 ORTHO05D003194 2.5e-16 89.4 117 48.7
Peaxi162Scf00815g00117 Petunia axillaris HOM05D002676 ORTHO05D003194 2.5e-16 89.4 83 60.2
Haze_00322 Corylus avellana HOM05D002676 ORTHO05D003194 3.3e-16 89.0 95 57.9
Nitab4.5_0001591g0070 Nicotiana tabacum HOM05D002676 ORTHO05D003194 1.6e-15 86.7 82 53.7
Sp6g16130 Schrenkiella parvula HOM05D002676 ORTHO05D003194 3.6e-15 85.5 83 60.2
CAN.G65.146 Capsicum annuum HOM05D002676 ORTHO05D003194 6.1e-15 84.7 83 57.8
Thhalv10015378m.g Eutrema salsugineum HOM05D002676 ORTHO05D003194 6.1e-15 84.7 83 60.2
A10p11390 Brassica napus HOM05D002676 ORTHO05D003194 2.3e-14 82.8 83 57.8
C09p44190 Brassica napus HOM05D002676 ORTHO05D003194 2.3e-14 82.8 83 57.8
BraA10t43233Z Brassica rapa HOM05D002676 ORTHO05D003194 2.3e-14 82.8 83 57.8
BcaB08g35760 Brassica carinata HOM05D002676 ORTHO05D003194 3.0e-14 82.4 83 57.8
Gohir.A12G245300 Gossypium hirsutum HOM05D002676 ORTHO05D003194 3.0e-14 82.4 83 56.6
Gohir.D12G246000 Gossypium hirsutum HOM05D002676 ORTHO05D003194 3.0e-14 82.4 83 56.6
Gorai.008G263700 Gossypium raimondii HOM05D002676 ORTHO05D003194 3.0e-14 82.4 83 56.6
Solyc03g080050.3 Solanum lycopersicum HOM05D002676 ORTHO05D003194 4.0e-14 82.0 83 56.6
Sopen03g021770 Solanum pennellii HOM05D002676 ORTHO05D003194 4.0e-14 82.0 83 56.6
BcaC04g20392 Brassica carinata HOM05D002676 ORTHO05D003194 5.2e-14 81.6 83 56.6
BolC9t57291H Brassica oleracea HOM05D002676 ORTHO05D003194 5.2e-14 81.6 83 56.6
CAN.G303.47 Capsicum annuum HOM05D002676 ORTHO05D003194 6.8e-14 81.3 83 56.6
Duzib205G1101 Durio zibethinus HOM05D002676 ORTHO05D003194 6.8e-14 81.3 83 55.4
Aa31LG3G9930 Aethionema arabicum HOM05D002676 ORTHO05D003194 1.2e-13 80.5 169 39.6
BcaB01g04275 Brassica carinata HOM05D002676 ORTHO05D003194 1.2e-13 80.5 83 57.8
BcaC01g06285 Brassica carinata HOM05D002676 ORTHO05D003194 1.2e-13 80.5 83 57.8
A03p14800 Brassica napus HOM05D002676 ORTHO05D003194 1.2e-13 80.5 83 57.8
C03p17290 Brassica napus HOM05D002676 ORTHO05D003194 1.2e-13 80.5 83 57.8
BolC3t14143H Brassica oleracea HOM05D002676 ORTHO05D003194 1.2e-13 80.5 83 57.8
BraA03t10773Z Brassica rapa HOM05D002676 ORTHO05D003194 1.2e-13 80.5 83 57.8
BcaB01g04272 Brassica carinata HOM05D002676 ORTHO05D003194 2.0e-13 79.7 83 57.8
Oeu029328.1 Olea europaea HOM05D002676 ORTHO05D003194 2.0e-13 79.7 172 36.6
Nitab4.5_0003561g0010 Nicotiana tabacum HOM05D002676 ORTHO05D003194 2.6e-13 79.3 83 54.2
Peaxi162Scf01026g00243 Petunia axillaris HOM05D002676 ORTHO05D003194 2.6e-13 79.3 83 55.4
COL.COLO4_14391 Corchorus olitorius HOM05D002676 ORTHO05D003194 3.4e-13 79.0 83 55.4
BcaB05g22110 Brassica carinata HOM05D002676 ORTHO05D003194 4.4e-13 78.6 82 56.1
BraA02t06121Z Brassica rapa HOM05D002676 ORTHO05D003194 9.8e-13 77.4 82 54.9
PGSC0003DMG400026924 Solanum tuberosum HOM05D002676 ORTHO05D003194 9.8e-13 77.4 83 51.8
BcaC03g14351 Brassica carinata HOM05D002676 ORTHO05D003194 1.3e-12 77.0 83 55.4
A02p10570 Brassica napus HOM05D002676 ORTHO05D003194 1.3e-12 77.0 83 55.4
C02p17640 Brassica napus HOM05D002676 ORTHO05D003194 1.3e-12 77.0 83 55.4
BraA02t06122Z Brassica rapa HOM05D002676 ORTHO05D003194 1.3e-12 77.0 83 55.4
Cfa016139 Carpinus fangiana HOM05D002676 ORTHO05D003194 1.3e-12 77.0 83 54.2
Gohir.A08G106100 Gossypium hirsutum HOM05D002676 ORTHO05D003194 1.3e-12 77.0 83 53.0
Gohir.D08G117500 Gossypium hirsutum HOM05D002676 ORTHO05D003194 1.3e-12 77.0 83 53.0
Gorai.004G126000 Gossypium raimondii HOM05D002676 ORTHO05D003194 1.3e-12 77.0 83 53.0
Lalb_Chr11g0067521 Lupinus albus HOM05D002676 ORTHO05D003194 1.3e-12 77.0 83 54.2
Thecc.03G211300 Theobroma cacao HOM05D002676 ORTHO05D003194 1.3e-12 77.0 83 53.0
Nn1g00477 Nelumbo nucifera HOM05D002676 ORTHO05D003194 1.7e-12 76.6 83 53.0
PGR142G3496 Punica granatum HOM05D002676 ORTHO05D003194 1.7e-12 76.6 83 53.0
BcaC03g14323 Brassica carinata HOM05D002676 ORTHO05D003194 2.2e-12 76.3 82 53.7
C02p17630 Brassica napus HOM05D002676 ORTHO05D003194 2.2e-12 76.3 82 53.7
BolC2t07894H Brassica oleracea HOM05D002676 ORTHO05D003194 2.2e-12 76.3 82 53.7
CSS0014747 Camellia sinensis var. sinensis HOM05D002676 ORTHO05D003194 2.2e-12 76.3 169 37.3
CiPaw.06G039000 Carya illinoinensis HOM05D002676 ORTHO05D003194 2.2e-12 76.3 83 54.2
Glyma.06G138500 Glycine max HOM05D002676 ORTHO05D003194 2.8e-12 75.9 83 53.0
Sopen06g029380 Solanum pennellii HOM05D002676 ORTHO05D003194 2.8e-12 75.9 83 51.8
BolC2t07895H Brassica oleracea HOM05D002676 ORTHO05D003194 3.7e-12 75.5 83 54.2
Duzib068G1387 Durio zibethinus HOM05D002676 ORTHO05D003194 3.7e-12 75.5 83 53.0
Lj1g0014590 Lotus japonicus HOM05D002676 ORTHO05D003194 3.7e-12 75.5 83 53.0
Nitab4.5_0000115g0130 Nicotiana tabacum HOM05D002676 ORTHO05D003194 3.7e-12 75.5 84 52.4
Os08g0158500 Oryza sativa ssp. japonica HOM05D002676 ORTHO05D003194 3.7e-12 75.5 75 52.0
Atru.chr12.2511 Acer truncatum HOM05D002676 ORTHO05D003194 6.3e-12 74.7 83 53.0
Atru.chr12.2533 Acer truncatum HOM05D002676 ORTHO05D003194 6.3e-12 74.7 83 53.0
CDE11G0690 Ceratophyllum demersum HOM05D002676 ORTHO05D003194 6.3e-12 74.7 83 51.8
Glyma.04G226400 Glycine max HOM05D002676 ORTHO05D003194 6.3e-12 74.7 83 53.0
Lalb_Chr08g0239461 Lupinus albus HOM05D002676 ORTHO05D003194 6.3e-12 74.7 83 53.0
QL09p006151 Quercus lobata HOM05D002676 ORTHO05D003194 8.3e-12 74.3 83 50.6
TAR375G0760 Trochodendron aralioides HOM05D002676 ORTHO05D003194 8.3e-12 74.3 83 51.8
CANSAT21G0360 Cannabis sativa HOM05D002676 ORTHO05D003194 1.1e-11 73.9 83 51.8
Hma1.2p1_0115F.1_g055650 Hydrangea macrophylla HOM05D002676 ORTHO05D003194 1.4e-11 73.6 169 37.9
TAR629G0525 Trochodendron aralioides HOM05D002676 ORTHO05D003194 1.4e-11 73.6 83 51.8
vmacro06467 Vaccinium macrocarpon HOM05D002676 ORTHO05D003194 1.4e-11 73.6 83 50.6
Cpa.g.sc3.176 Carica papaya HOM05D002676 ORTHO05D003194 1.8e-11 73.2 83 50.6
CARHR267300 Cardamine hirsuta HOM05D002676 ORTHO05D003194 2.4e-11 72.8 83 51.8
Phvul.009G039300 Phaseolus vulgaris HOM05D002676 ORTHO05D003194 2.4e-11 72.8 83 51.8
Ciclev10020366m.g Citrus clementina HOM05D002676 ORTHO05D003194 3.1e-11 72.4 83 51.8
VMungo1309G0526 Vigna mungo HOM05D002676 ORTHO05D003194 3.1e-11 72.4 83 51.8
Dinv29198 Davidia involucrata HOM05D002676 ORTHO05D003194 4.1e-11 72.0 171 35.7
MELO3C024849.2 Cucumis melo HOM05D002676 ORTHO05D003194 5.4e-11 71.6 83 50.6
MSTRG.8589 Avicennia marina HOM05D002676 ORTHO05D003194 9.2e-11 70.9 83 50.6
Manes.05G196100 Manihot esculenta HOM05D002676 ORTHO05D003194 9.2e-11 70.9 165 34.5
GSVIVG01016796001 Vitis vinifera HOM05D002676 ORTHO05D003194 9.2e-11 70.9 83 51.8
CSS0031237 Camellia sinensis var. sinensis HOM05D002676 ORTHO05D003194 2.0e-10 69.7 84 48.8
Carub.0008s1439 Capsella rubella HOM05D002676 ORTHO05D003194 2.0e-10 69.7 83 49.4
ClCG07G009690 Citrullus lanatus HOM05D002676 ORTHO05D003194 2.0e-10 69.7 83 49.4
Peaxi162Scf00166g00910 Petunia axillaris HOM05D002676 ORTHO05D003194 2.0e-10 69.7 82 46.3
Sed0003975 Sechium edule HOM05D002676 ORTHO05D003194 3.5e-10 68.9 83 49.4
CDE09G0132 Ceratophyllum demersum HOM05D002676 ORTHO05D003194 4.5e-10 68.6 83 47.0
TWI23G0751 Tripterygium wilfordii HOM05D002676 ORTHO05D003194 4.5e-10 68.6 82 50.0
AT5G54100 Arabidopsis thaliana HOM05D002676 ORTHO05D003194 5.9e-10 68.2 83 50.6
CsaV3_4G009820 Cucumis sativus L. HOM05D002676 ORTHO05D003194 5.9e-10 68.2 83 48.2
Ca_16795_v3 Cicer arietinum L. HOM05D002676 ORTHO05D003194 7.8e-10 67.8 83 50.6
Eucgr.K00456 Eucalyptus grandis HOM05D002676 ORTHO05D003194 1.0e-09 67.4 83 47.0
THA.LOC104811884 Tarenaya hassleriana HOM05D002676 ORTHO05D003194 1.3e-09 67.0 171 37.4
Thecc.01G324200 Theobroma cacao HOM05D002676 ORTHO05D003194 1.7e-09 66.6 81 44.4
TPR.G35914 Trifolium pratense HOM05D002676 ORTHO05D003194 1.7e-09 66.6 83 47.0
SGA_v2.0_scaffold18G08488 Striga asiatica HOM05D002676 ORTHO05D003194 2.3e-09 66.2 83 47.0
AL8G29230 Arabidopsis lyrata HOM05D002676 ORTHO05D003194 2.9e-09 65.9 83 49.4
CSS0047140 Camellia sinensis var. sinensis HOM05D002676 ORTHO05D003194 8.6e-09 64.3 95 42.1
Rhsim09G0210700 Rhododendron simsii HOM05D002676 ORTHO05D003194 8.6e-09 64.3 83 44.6
vmacro10169 Vaccinium macrocarpon HOM05D002676 ORTHO05D003194 8.6e-09 64.3 83 45.8
MSTRG.26962 Avicennia marina HOM05D002676 ORTHO05D003194 1.1e-08 63.9 169 33.7
Haze_05136 Corylus avellana HOM05D002676 ORTHO05D003194 1.1e-08 63.9 83 42.2
CiPaw.05G208000 Carya illinoinensis HOM05D002676 ORTHO05D003194 1.9e-08 63.2 83 44.6
Solyc06g073030.3 Solanum lycopersicum HOM05D002676 ORTHO05D003194 2.5e-08 62.8 83 45.8
TWI14G1344 Tripterygium wilfordii HOM05D002676 ORTHO05D003194 3.3e-08 62.4 165 35.2
Sc19g0000430 Simmondsia chinensis HOM05D002676 ORTHO05D003194 4.3e-08 62.0 59 57.6
Zm00001eb172350 Zea mays HOM05D002676 ORTHO05D003194 4.3e-08 62.0 55 54.5
Zm00001eb415710 Zea mays HOM05D002676 ORTHO05D003194 4.3e-08 62.0 55 54.5
QL12p034564 Quercus lobata HOM05D002676 ORTHO05D003194 5.6e-08 61.6 83 42.2
COL.COLO4_23139 Corchorus olitorius HOM05D002676 ORTHO05D003194 7.3e-08 61.2 82 42.7
SGA_v2.0_scaffold44G16866 Striga asiatica HOM05D002676 ORTHO05D003194 1.2e-07 60.5 165 33.9
HPP92_020109 Vanilla planifolia HOM05D002676 ORTHO05D003194 1.2e-07 60.5 83 43.4
Pp3c14_5440 Physcomitrium patens HOM05D002676 ORTHO05D003194 2.1e-07 59.7 83 42.2
EL10Ac3g05142 Beta vulgaris HOM05D002676 ORTHO05D003194 8.0e-07 57.8 55 50.9
CAN.G206.185 Capsicum annuum HOM05D002676 ORTHO05D003194 8.0e-07 57.8 82 37.8
AUR62005955 Chenopodium quinoa HOM05D002676 ORTHO05D003194 8.0e-07 57.8 84 44.0
Mapoly0011s0012 Marchantia polymorpha HOM05D002676 ORTHO05D003194 1.0e-06 57.4 83 43.4
DCAR_008993 Daucus carota HOM05D002676 ORTHO05D003194 1.4e-06 57.0 83 42.2
HanXRQChr04g0117931 Helianthus annuus HOM05D002676 ORTHO05D003194 1.8e-06 56.6 39 69.2
CBR_g19534 Chara braunii HOM05D000019 ORTHO05D000048 2.3e-06 56.2 51 56.9
ECA238G0251 Erigeron canadensis HOM05D002676 ORTHO05D006846 4.0e-06 55.5 37 67.6
SGA_v2.0_scaffold141G35589 Striga asiatica HOM05D002676 ORTHO05D003194 4.0e-06 55.5 83 39.8
Cc02_g00670 Coffea canephora HOM05D002676 ORTHO05D003194 6.8e-06 54.7 34 82.4
Medtr3g093220 Medicago truncatula HOM05D002676 ORTHO05D003194 8.9e-06 54.3 83 41.0


User provided reference genes

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