Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g36113 Brassica carinata HOM05D001401 ORTHO05D006368 4.3e-142 508.1 275 100.0
C07p07640 Brassica napus HOM05D001401 ORTHO05D006368 6.1e-136 487.6 293 92.8
BolC7t41185H Brassica oleracea HOM05D001401 ORTHO05D006368 6.1e-136 487.6 293 92.8
A07p04770 Brassica napus HOM05D001401 ORTHO05D006368 9.4e-129 463.8 293 86.3
BraA07t28264Z Brassica rapa HOM05D001401 ORTHO05D006368 9.4e-129 463.8 293 86.3
A03p45690 Brassica napus HOM05D001401 ORTHO05D006368 1.8e-108 396.4 283 81.3
Sp3g29340 Schrenkiella parvula HOM05D001401 ORTHO05D006368 4.1e-108 395.2 319 72.4
BraA03t13701Z Brassica rapa HOM05D001401 ORTHO05D006368 7.0e-108 394.4 284 80.6
AT2G16070 Arabidopsis thaliana HOM05D001401 ORTHO05D006368 4.5e-107 391.7 313 71.6
BcaC01g03041 Brassica carinata HOM05D001401 ORTHO05D006368 5.0e-106 388.3 307 73.3
C03p56790 Brassica napus HOM05D001401 ORTHO05D006368 5.0e-106 388.3 307 73.3
BolC3t17961H Brassica oleracea HOM05D001401 ORTHO05D006368 5.0e-106 388.3 307 73.3
BcaB08g34633 Brassica carinata HOM05D001401 ORTHO05D006368 4.7e-104 381.7 308 74.4
Thhalv10022794m.g Eutrema salsugineum HOM05D001401 ORTHO05D006368 1.2e-102 377.1 305 75.1
Carub.0003s2988 Capsella rubella HOM05D001401 ORTHO05D006368 4.4e-102 375.2 320 69.1
CARHR106370 Cardamine hirsuta HOM05D001401 ORTHO05D006368 3.6e-96 355.5 314 68.5
Aa31LG8G13520 Aethionema arabicum HOM05D001401 ORTHO05D006368 8.3e-93 344.4 315 64.4
A09p10890 Brassica napus HOM05D001401 ORTHO05D006368 8.6e-90 334.3 303 66.7
THA.LOC104807334 Tarenaya hassleriana HOM05D001401 ORTHO05D006368 4.3e-81 305.4 318 58.5
C09p12860 Brassica napus HOM05D001401 ORTHO05D006368 4.4e-70 268.9 291 59.8
BolC9t54175H Brassica oleracea HOM05D001401 ORTHO05D006368 4.4e-70 268.9 291 59.8
THA.LOC104820173 Tarenaya hassleriana HOM05D001401 ORTHO05D006368 4.2e-68 262.3 319 53.3
Cpa.g.sc62.97 Carica papaya HOM05D001401 ORTHO05D006368 1.5e-62 243.8 327 52.9
BcaNung01772 Brassica carinata HOM05D001401 ORTHO05D006368 5.1e-58 228.8 210 70.0
vmacro02151 Vaccinium macrocarpon HOM05D001401 ORTHO05D006368 4.3e-57 225.7 304 48.0
CiPaw.05G060100 Carya illinoinensis HOM05D001401 ORTHO05D006368 1.6e-56 223.8 309 47.6
Gohir.D01G172200 Gossypium hirsutum HOM05D001401 ORTHO05D006368 2.4e-55 219.9 308 47.1
Gorai.002G213800 Gossypium raimondii HOM05D001401 ORTHO05D006368 4.0e-55 219.2 308 46.8
Thecc.02G031200 Theobroma cacao HOM05D001401 ORTHO05D006368 6.9e-55 218.4 331 44.7
Duzib132G0928 Durio zibethinus HOM05D001401 ORTHO05D006368 9.0e-55 218.0 326 46.9
Gohir.A01G181100 Gossypium hirsutum HOM05D001401 ORTHO05D006368 3.4e-54 216.1 308 46.8
Manes.17G098401 Manihot esculenta HOM05D001401 ORTHO05D006368 5.8e-54 215.3 325 43.1
RcHm_v2.0_Chr6g0262181 Rosa chinensis HOM05D001401 ORTHO05D006368 9.9e-54 214.5 302 44.7
FAN20G2914 Fragaria x ananassa HOM05D001401 ORTHO05D006368 2.2e-53 213.4 298 45.0
Ciclev10028944m.g Citrus clementina HOM05D001401 ORTHO05D006368 2.9e-53 213.0 310 44.5
Glyma.12G046700 Glycine max HOM05D001401 ORTHO05D006368 6.4e-53 211.8 309 43.0
Hma1.2p1_0584F.1_g183440 Hydrangea macrophylla HOM05D001401 ORTHO05D006368 6.4e-53 211.8 301 46.2
BraA09t36729Z Brassica rapa HOM05D001401 ORTHO05D006368 8.4e-53 211.5 160 76.9
Lj3g0025450 Lotus japonicus HOM05D001401 ORTHO05D006368 1.9e-52 210.3 316 43.7
VMungo1127G1180 Vigna mungo HOM05D001401 ORTHO05D006368 1.9e-52 210.3 313 43.5
Lalb_Chr03g0025871 Lupinus albus HOM05D001401 ORTHO05D006368 3.2e-52 209.5 302 46.0
Manes.15G147100 Manihot esculenta HOM05D001401 ORTHO05D006368 5.5e-52 208.8 324 42.3
Phvul.011G048500 Phaseolus vulgaris HOM05D001401 ORTHO05D006368 5.5e-52 208.8 310 42.6
Psat7g205720 Pisum sativum HOM05D001401 ORTHO05D006368 2.1e-51 206.8 308 43.8
Potri.004G149900 Populus trichocarpa HOM05D001401 ORTHO05D006368 2.7e-51 206.5 320 42.8
Duzib248G1632 Durio zibethinus HOM05D001401 ORTHO05D006368 3.5e-51 206.1 341 41.6
Glyma.11G121600 Glycine max HOM05D001401 ORTHO05D006368 4.6e-51 205.7 310 44.2
arahy.Tifrunner.gnm1.ann1.U2ETAV Arachis hypogaea HOM05D001401 ORTHO05D006368 1.3e-50 204.1 311 42.4
Lalb_Chr01g0002831 Lupinus albus HOM05D001401 ORTHO05D006368 1.3e-50 204.1 314 42.7
Sed0001686 Sechium edule HOM05D001401 ORTHO05D006368 6.7e-50 201.8 310 43.2
CsaV3_2G014470 Cucumis sativus L. HOM05D001401 ORTHO05D006368 8.7e-50 201.4 310 43.9
Potri.009G111000 Populus trichocarpa HOM05D001401 ORTHO05D006368 8.7e-50 201.4 322 42.2
MD05G1071000 Malus domestica HOM05D001401 ORTHO05D006368 1.1e-49 201.1 302 47.0
TAR628G1386 Trochodendron aralioides HOM05D001401 ORTHO05D006368 1.1e-49 201.1 309 44.3
TAR381G0019 Trochodendron aralioides HOM05D001401 ORTHO05D006368 1.5e-49 200.7 307 45.0
Lsat_1_v5_gn_5_118161 Lactuca sativa HOM05D001401 ORTHO05D006368 2.5e-49 199.9 300 43.7
Actinidia00491 Actinidia chinensis HOM05D001401 ORTHO05D006368 3.3e-49 199.5 294 47.3
Rhsim11G0172600 Rhododendron simsii HOM05D000554 ORTHO05D002829 3.3e-49 199.5 348 42.0
DCAR_029001 Daucus carota HOM05D001401 ORTHO05D006368 4.3e-49 199.1 309 42.1
Oeu034083.1 Olea europaea HOM05D001401 ORTHO05D006368 4.3e-49 199.1 311 44.1
MELO3C021952.2 Cucumis melo HOM05D001401 ORTHO05D002222 7.4e-49 198.4 310 42.9
Sed0023769 Sechium edule HOM05D001401 ORTHO05D006368 9.6e-49 198.0 302 42.4
Sabra09G0084600 Salix brachista HOM05D001401 ORTHO05D006368 1.3e-48 197.6 320 42.2
CANSAT25G1485 Cannabis sativa HOM05D001401 ORTHO05D006368 2.1e-48 196.8 304 45.7
AUR62011378 Chenopodium quinoa HOM05D001401 ORTHO05D006368 2.1e-48 196.8 297 42.8
COL.COLO4_17797 Corchorus olitorius HOM05D000370 ORTHO05D001335 3.7e-48 196.1 237 48.1
Migut.B00279 Erythranthe guttata HOM05D001401 ORTHO05D006368 6.2e-48 195.3 291 44.0
Haze_02430 Corylus avellana HOM05D001401 ORTHO05D006368 8.1e-48 194.9 304 45.7
Ca_20836_v3 Cicer arietinum L. HOM05D001401 ORTHO05D006368 1.8e-47 193.7 307 41.4
Actinidia27915 Actinidia chinensis HOM05D001401 ORTHO05D006368 2.4e-47 193.4 325 42.8
Aqoxy6G00969 Aquilegia oxysepala HOM05D001401 ORTHO05D006368 2.4e-47 193.4 310 41.0
QL11p037824 Quercus lobata HOM05D001401 ORTHO05D006368 2.4e-47 193.4 347 41.2
TWI31G0569 Tripterygium wilfordii HOM05D001401 ORTHO05D002222 9.0e-47 191.4 309 40.1
AUR62016681 Chenopodium quinoa HOM05D001401 ORTHO05D006368 4.5e-46 189.1 297 41.4
Cc02_g18020 Coffea canephora HOM05D001401 ORTHO05D006368 4.5e-46 189.1 302 45.0
Medtr4g068880 Medicago truncatula HOM05D001401 ORTHO05D006368 5.8e-46 188.7 308 41.9
Nitab4.5_0003816g0020 Nicotiana tabacum HOM05D001401 ORTHO05D006368 5.8e-46 188.7 304 42.1
Hund06213 Selenicereus undatus HOM05D001401 ORTHO05D006368 5.8e-46 188.7 306 42.8
ECA234G2696 Erigeron canadensis HOM05D000324 ORTHO05D001014 7.6e-46 188.3 286 42.7
Peaxi162Scf00016g01140 Petunia axillaris HOM05D001401 ORTHO05D006368 7.6e-46 188.3 302 41.7
HanXRQChr10g0307141 Helianthus annuus HOM05D001401 ORTHO05D006368 1.7e-45 187.2 292 42.5
PSO700G0268 Papaver somniferum HOM05D001401 ORTHO05D006368 1.7e-45 187.2 306 42.5
PSO170G2675 Papaver somniferum HOM05D001401 ORTHO05D006368 2.2e-45 186.8 306 42.2
Solyc01g109260.3 Solanum lycopersicum HOM05D001401 ORTHO05D006368 2.9e-45 186.4 295 43.4
PGSC0003DMG400025176 Solanum tuberosum HOM05D001401 ORTHO05D006368 3.8e-45 186.0 293 43.0
Atru.chr5.2919 Acer truncatum HOM05D001401 ORTHO05D006368 8.4e-45 184.9 314 42.4
Nn5g29458 Nelumbo nucifera HOM05D001401 ORTHO05D006368 8.4e-45 184.9 301 42.9
MSTRG.5386 Avicennia marina HOM05D001401 ORTHO05D006368 1.1e-44 184.5 310 42.9
Sopen01g051420 Solanum pennellii HOM05D001401 ORTHO05D006368 1.1e-44 184.5 293 42.3
Sed0001319 Sechium edule HOM05D001401 ORTHO05D006368 2.5e-44 183.3 310 39.0
TWI75G1696 Tripterygium wilfordii HOM05D001401 ORTHO05D006368 5.5e-44 182.2 305 39.7
FAN24G0528 Fragaria x ananassa HOM05D001401 ORTHO05D006368 7.1e-44 181.8 297 44.4
CsaV3_7G010190 Cucumis sativus L. HOM05D001401 ORTHO05D006368 9.3e-44 181.4 313 38.3
Prupe.8G107000 Prunus persica HOM05D001401 ORTHO05D006368 2.7e-43 179.9 305 43.3
Hund00301 Selenicereus undatus HOM05D001401 ORTHO05D006368 7.9e-43 178.3 305 39.7
FvH4_2g07780 Fragaria vesca HOM05D001401 ORTHO05D006368 1.0e-42 177.9 297 43.1
Sabra04G0099700 Salix brachista HOM05D001401 ORTHO05D006368 1.0e-42 177.9 362 37.6
ClCG02G005370 Citrullus lanatus HOM05D001401 ORTHO05D006368 1.8e-42 177.2 317 38.5
MBI16_g36202_MAGBIO Magnolia biondii HOM05D001401 ORTHO05D002222 2.3e-42 176.8 254 48.4
CAN.G322.101 Capsicum annuum HOM05D001401 ORTHO05D006368 3.0e-42 176.4 307 40.4
Nitab4.5_0004280g0010 Nicotiana tabacum HOM05D001401 ORTHO05D006368 3.0e-42 176.4 317 40.4
MSTRG.20113 Avicennia marina HOM05D001401 ORTHO05D006368 3.9e-42 176.0 311 42.8
FAN15G1840 Fragaria x ananassa HOM05D001401 ORTHO05D006368 5.1e-42 175.6 223 47.1
Dinv42099 Davidia involucrata HOM05D001401 ORTHO05D006368 8.7e-42 174.9 311 43.1
Sc08g0000270 Simmondsia chinensis HOM05D001401 ORTHO05D006368 8.7e-42 174.9 305 40.7
Eucgr.I01238 Eucalyptus grandis HOM05D001401 ORTHO05D006368 1.5e-41 174.1 300 42.7
Cfa021516 Carpinus fangiana HOM05D001401 ORTHO05D006368 3.3e-41 172.9 229 47.2
Migut.N01216 Erythranthe guttata HOM05D001401 ORTHO05D006368 3.3e-41 172.9 297 40.7
SalBow6G2648 Salvia bowleyana HOM05D001401 ORTHO05D006368 3.3e-41 172.9 301 41.2
Hund00294 Selenicereus undatus HOM05D001401 ORTHO05D006368 3.3e-41 172.9 294 40.5
BcaB07g31630 Brassica carinata HOM05D006912 ORTHO05D008686 4.3e-41 172.6 147 66.7
Ah.01g006390 Amaranthus hybridus HOM05D001401 ORTHO05D006368 5.7e-41 172.2 289 41.2
MELO3C018410.2 Cucumis melo HOM05D001401 ORTHO05D006368 7.4e-41 171.8 319 37.6
Lj9P365T45 Lonicera japonica HOM05D001401 ORTHO05D006368 1.3e-40 171.0 211 50.7
QL11p040047 Quercus lobata HOM05D001401 ORTHO05D006368 2.1e-40 170.2 220 46.8
PSO541G5534 Papaver somniferum HOM05D001401 ORTHO05D006368 2.8e-40 169.9 308 38.6
Medtr0026s0200 Medicago truncatula HOM05D001401 ORTHO05D006368 4.8e-40 169.1 231 44.2
CSS0017552 Camellia sinensis var. sinensis HOM05D001401 ORTHO05D006368 6.3e-40 168.7 310 41.6
TWI79G1069 Tripterygium wilfordii HOM05D001401 ORTHO05D002222 6.3e-40 168.7 306 40.2
ATR0733G254 Amborella trichopoda HOM05D001401 ORTHO05D006368 2.4e-39 166.8 319 37.0
CDE01G0160 Ceratophyllum demersum HOM05D001401 ORTHO05D006368 4.1e-39 166.0 300 40.3
Dinv23564 Davidia involucrata HOM05D001401 ORTHO05D006368 4.1e-39 166.0 306 41.2
TPR.G28096 Trifolium pratense HOM05D001401 ORTHO05D006368 4.1e-39 166.0 310 41.0
PSO675G0936 Papaver somniferum HOM05D001401 ORTHO05D006368 5.3e-39 165.6 312 39.1
SGA_v2.0_scaffold58G20583 Striga asiatica HOM05D001401 ORTHO05D006368 5.3e-39 165.6 286 40.9
Cfa021524 Carpinus fangiana HOM05D001401 ORTHO05D002222 2.0e-38 163.7 222 46.4
ClCG09G017860 Citrullus lanatus HOM05D001401 ORTHO05D006368 5.9e-38 162.2 307 37.8
PGR042G1488 Punica granatum HOM05D001401 ORTHO05D006368 1.4e-36 157.5 296 40.5
Os07g0123300 Oryza sativa ssp. japonica HOM05D001401 ORTHO05D006368 1.6e-35 154.1 238 40.8
Oeu027593.1 Olea europaea HOM05D001574 ORTHO05D006368 1.9e-33 147.1 276 40.6
Ah.01g019700 Amaranthus hybridus HOM05D001401 ORTHO05D002222 4.3e-33 146.0 371 32.6
Zm00001eb299190 Zea mays HOM05D001401 ORTHO05D006368 4.5e-30 136.0 325 36.0
CDE04G2456 Ceratophyllum demersum HOM05D001401 ORTHO05D006368 7.7e-30 135.2 293 36.2
GSVIVG01031902001 Vitis vinifera HOM05D001401 ORTHO05D006368 1.1e-28 131.3 175 46.9
SEGI_00142 Sequoiadendron giganteum HOM05D001401 ORTHO05D006368 2.5e-28 130.2 324 34.3
Nn1g05138 Nelumbo nucifera HOM05D001401 ORTHO05D006368 2.3e-26 123.6 165 47.3
EL10Ac9g21774 Beta vulgaris HOM05D001401 ORTHO05D002222 2.5e-25 120.2 270 39.6
Mapoly0001s0328 Marchantia polymorpha HOM05D001401 ORTHO05D006368 2.0e-22 110.5 363 27.5
Pp3c2_5300 Physcomitrium patens HOM05D001401 ORTHO05D006368 2.2e-21 107.1 358 32.4
AagrBONN_evm.TU.Sc2ySwM_228.2503 Anthoceros agrestis HOM05D001401 ORTHO05D006368 5.0e-21 105.9 323 32.2
Pp3c22_17090 Physcomitrium patens HOM05D001401 ORTHO05D006368 6.5e-21 105.5 377 28.1
BcaC04g23035 Brassica carinata HOM05D001401 ORTHO05D006368 3.6e-19 99.8 72 70.8
Pp3c17_18860 Physcomitrium patens HOM05D001401 ORTHO05D006368 6.7e-18 95.5 356 29.2
Pp3c1_32220 Physcomitrium patens HOM05D001401 ORTHO05D006368 2.0e-17 94.0 348 30.7
SEGI_14403 Sequoiadendron giganteum HOM05D001401 ORTHO05D006368 4.8e-16 89.4 148 41.9
BcaB07g31779 Brassica carinata HOM05D001401 ORTHO05D006368 6.3e-16 89.0 95 60.0
TAR623G1717 Trochodendron aralioides HOM05D001401 ORTHO05D006368 2.6e-14 83.6 88 51.1
Pp3c19_14090 Physcomitrium patens HOM05D001401 ORTHO05D006368 7.7e-14 82.0 155 34.8
unitig_21.g20770 Utricularia gibba HOM05D000370 ORTHO05D001335 1.9e-12 77.4 214 33.6
CDE02G3784 Ceratophyllum demersum HOM05D001401 ORTHO05D002222 3.6e-11 73.2 126 34.1
CBR_g41289 Chara braunii HOM05D004891 ORTHO05D006368 3.6e-11 73.2 128 38.3
Lj1C312T0 Lonicera japonica HOM05D001401 ORTHO05D006368 1.8e-10 70.9 115 40.0
SEGI_34742 Sequoiadendron giganteum HOM05D004891 ORTHO05D005997 9.7e-09 65.1 88 42.0
SEGI_25677 Sequoiadendron giganteum HOM05D004891 ORTHO05D005997 1.3e-08 64.7 175 31.4
SalBow1G1061 Salvia bowleyana HOM05D001999 ORTHO05D001994 2.2e-08 63.9 57 61.4
Pp3c18_7150 Physcomitrium patens HOM05D001401 ORTHO05D006368 3.7e-08 63.2 332 27.1
FAN15G1877 Fragaria x ananassa HOM05D001401 ORTHO05D006368 1.8e-07 60.8 55 54.5
SEGI_17958 Sequoiadendron giganteum HOM05D001401 ORTHO05D006368 9.1e-07 58.5 181 27.6
SEGI_09179 Sequoiadendron giganteum HOM05D004891 ORTHO05D005997 2.7e-06 57.0 143 31.5


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