Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g36060 Brassica carinata HOM05D004489 ORTHO05D092528 1.6e-124 449.5 238 100.0
C08p08580 Brassica napus HOM05D004489 ORTHO05D010056 5.7e-66 255.0 219 68.9
BcaC07g37389 Brassica carinata HOM05D004489 ORTHO05D010056 2.4e-64 249.6 219 68.0
BolC8t47699H Brassica oleracea HOM05D004489 ORTHO05D010056 2.4e-64 249.6 219 68.0
BcaC03g16680 Brassica carinata HOM05D004489 ORTHO05D010056 5.4e-56 221.9 222 62.2
BcaC04g20631 Brassica carinata HOM05D004489 ORTHO05D010056 6.6e-54 214.9 204 62.7
C09p41300 Brassica napus HOM05D004489 ORTHO05D010056 6.6e-54 214.9 204 62.7
C07p01860 Brassica napus HOM05D004489 ORTHO05D010056 7.3e-53 211.5 217 58.5
BcaC05g29022 Brassica carinata HOM05D004489 ORTHO05D010056 5.8e-50 201.8 214 57.5
C05p52380 Brassica napus HOM05D004489 ORTHO05D010056 5.8e-50 201.8 214 57.5
C07p03810 Brassica napus HOM05D004489 ORTHO05D010056 6.4e-49 198.4 209 57.9
BolC7t40773H Brassica oleracea HOM05D004489 ORTHO05D010056 1.9e-48 196.8 210 57.6
BolC2t08562H Brassica oleracea HOM05D004489 ORTHO05D010056 3.2e-48 196.1 209 57.9
BcaC02g11524 Brassica carinata HOM05D004489 ORTHO05D010056 4.1e-48 195.7 197 61.9
C07p23290 Brassica napus HOM05D004489 ORTHO05D010056 9.2e-48 194.5 205 58.0
BcaC08g45661 Brassica carinata HOM05D004489 ORTHO05D010056 4.6e-47 192.2 222 53.6
BcaNung03342 Brassica carinata HOM05D004489 ORTHO05D010056 4.6e-47 192.2 196 60.7
BcaB02g10531 Brassica carinata HOM05D004489 ORTHO05D094500 6.0e-47 191.8 212 57.5
BcaC04g22095 Brassica carinata HOM05D004489 ORTHO05D000493 3.0e-46 189.5 209 56.9
BolC9t55268H Brassica oleracea HOM05D004489 ORTHO05D010056 3.0e-46 189.5 209 56.9
C01p35260 Brassica napus HOM05D004489 ORTHO05D010056 4.7e-44 182.2 230 53.5
C09p20870 Brassica napus HOM05D004489 ORTHO05D010056 6.2e-44 181.8 222 52.7
BolC1t03483H Brassica oleracea HOM05D004489 ORTHO05D010056 6.2e-44 181.8 225 53.8
BolC9t54984H Brassica oleracea HOM05D004489 ORTHO05D010056 6.2e-44 181.8 222 52.7
BcaC07g38382 Brassica carinata HOM05D004489 ORTHO05D010056 1.4e-43 180.6 230 52.6
A06p23470 Brassica napus HOM05D004489 ORTHO05D010056 4.4e-42 175.6 226 53.5
BcaC09g51560 Brassica carinata HOM05D004489 ORTHO05D010056 5.8e-42 175.3 193 56.0
C03p64090 Brassica napus HOM05D004489 ORTHO05D010056 5.8e-42 175.3 203 53.7
C06p10210 Brassica napus HOM05D004489 ORTHO05D010056 9.9e-42 174.5 236 50.4
BolC3t18663H Brassica oleracea HOM05D004489 ORTHO05D010056 2.4e-40 169.9 203 52.2
C02p47420 Brassica napus HOM05D004489 ORTHO05D010056 7.1e-40 168.3 179 58.1
C01p30160 Brassica napus HOM05D004489 ORTHO05D010056 1.6e-39 167.2 175 61.7
C09p34080 Brassica napus HOM05D004489 ORTHO05D010056 1.6e-39 167.2 210 51.9
BolC7t42863H Brassica oleracea HOM05D004489 ORTHO05D010056 1.6e-39 167.2 203 53.7
BolC9t56245H Brassica oleracea HOM05D004489 ORTHO05D010056 6.0e-39 165.2 209 51.7
BcaC04g20751 Brassica carinata HOM05D004489 ORTHO05D010056 1.0e-38 164.5 211 54.5
BcaC02g10072 Brassica carinata HOM05D004489 ORTHO05D090663 5.1e-38 162.2 190 55.3
BolC7t42604H Brassica oleracea HOM05D004489 ORTHO05D010056 1.9e-37 160.2 165 61.8
BraA04t16648Z Brassica rapa HOM05D004489 ORTHO05D018788 5.6e-37 158.7 197 55.3
BcaC01g01829 Brassica carinata HOM05D004489 ORTHO05D010056 9.5e-37 157.9 183 54.6
BolC5t31966H Brassica oleracea HOM05D004489 ORTHO05D018788 1.6e-36 157.1 174 56.3
C07p01670 Brassica napus HOM05D008277 ORTHO05D018788 4.7e-36 155.6 167 59.3
C02p57490 Brassica napus HOM05D004489 ORTHO05D010056 6.2e-36 155.2 171 60.2
BcaC07g38503 Brassica carinata HOM05D004489 ORTHO05D010056 1.1e-35 154.5 151 63.6
BcaB06g26545 Brassica carinata HOM05D004489 ORTHO05D095075 3.1e-35 152.9 223 48.9
C01p35220 Brassica napus HOM05D004489 ORTHO05D010056 5.2e-35 152.1 172 55.2
A07p11790 Brassica napus HOM05D004489 ORTHO05D010056 6.8e-35 151.8 161 59.0
BcaC03g14954 Brassica carinata HOM05D004489 ORTHO05D010056 7.6e-34 148.3 170 56.5
C07p01280 Brassica napus HOM05D004489 ORTHO05D098218 4.9e-33 145.6 159 57.2
BolC1t01193H Brassica oleracea HOM05D004489 ORTHO05D010056 1.1e-32 144.4 98 79.6
BcaC03g16777 Brassica carinata HOM05D004489 ORTHO05D027759 1.4e-32 144.1 116 70.7
BolC2t10703H Brassica oleracea HOM05D004489 ORTHO05D027759 1.4e-32 144.1 116 70.7
BraA07t28964Z Brassica rapa HOM05D004489 ORTHO05D010056 4.2e-32 142.5 171 55.0
BcaB06g27095 Brassica carinata HOM05D004489 ORTHO05D095035 5.4e-32 142.1 175 52.6
BraA05t20820Z Brassica rapa HOM05D004489 ORTHO05D027759 1.6e-31 140.6 115 71.3
BcaC04g22798 Brassica carinata HOM05D004489 ORTHO05D010056 2.1e-31 140.2 125 65.6
BcaB05g24918 Brassica carinata HOM05D004489 ORTHO05D092070 6.0e-31 138.7 190 48.4
BcaC02g07770 Brassica carinata HOM05D004489 ORTHO05D010056 6.0e-31 138.7 164 55.5
BolC9t58376H Brassica oleracea HOM05D004489 ORTHO05D018788 7.8e-31 138.3 180 51.7
BcaC04g22309 Brassica carinata HOM05D004489 ORTHO05D010056 5.1e-30 135.6 162 53.1
A05p19170 Brassica napus HOM05D004489 ORTHO05D027759 6.6e-30 135.2 115 68.7
A05p21780 Brassica napus HOM05D004489 ORTHO05D027587 6.6e-30 135.2 81 90.1
BraA05t21099Z Brassica rapa HOM05D004489 ORTHO05D027587 6.6e-30 135.2 81 90.1
BcaC04g22067 Brassica carinata HOM05D004489 ORTHO05D027587 1.5e-29 134.0 81 88.9
C02p24700 Brassica napus HOM05D004489 ORTHO05D098125 4.3e-29 132.5 160 51.9
BcaB01g01502 Brassica carinata HOM05D004489 ORTHO05D094885 7.3e-29 131.7 146 56.2
BraA07t28336Z Brassica rapa HOM05D004489 ORTHO05D018788 9.6e-29 131.3 185 50.3
BolC9t55309H Brassica oleracea HOM05D004489 ORTHO05D027587 1.2e-28 131.0 81 87.7
BcaC05g28262 Brassica carinata HOM05D004489 ORTHO05D010056 2.4e-27 126.7 174 51.1
BcaC07g37478 Brassica carinata HOM05D004489 ORTHO05D010056 3.1e-27 126.3 102 69.6
A01p28040 Brassica napus HOM05D004489 ORTHO05D018788 3.1e-27 126.3 187 48.1
BcaC09g51020 Brassica carinata HOM05D004489 ORTHO05D010056 5.3e-27 125.6 149 53.7
BcaB04g17396 Brassica carinata HOM05D004489 ORTHO05D095687 6.9e-27 125.2 202 44.6
BcaC04g19493 Brassica carinata HOM05D004489 ORTHO05D010056 9.0e-27 124.8 147 54.4
C05p26780 Brassica napus HOM05D004489 ORTHO05D010056 1.3e-25 120.9 151 51.7
BolC8t47151H Brassica oleracea HOM05D004489 ORTHO05D010056 1.7e-25 120.6 159 52.2
BolC4t27228H Brassica oleracea HOM05D004489 ORTHO05D018788 2.2e-25 120.2 149 49.0
BcaC05g26196 Brassica carinata HOM05D004489 ORTHO05D010056 8.4e-25 118.2 91 74.7
C09p39590 Brassica napus HOM05D004489 ORTHO05D010056 8.4e-25 118.2 158 51.9
BcaC01g00378 Brassica carinata HOM05D004489 ORTHO05D010056 1.1e-24 117.9 153 52.3
C06p26040 Brassica napus HOM05D004489 ORTHO05D010056 5.4e-24 115.5 97 72.2
C08p11390 Brassica napus HOM05D004489 ORTHO05D010056 9.3e-24 114.8 91 73.6
BcaC04g18700 Brassica carinata HOM05D004489 ORTHO05D010056 1.6e-23 114.0 240 38.3
C01p50400 Brassica napus HOM05D004489 ORTHO05D010056 3.0e-22 109.8 84 72.6
BcaC08g44976 Brassica carinata HOM05D004489 ORTHO05D010056 3.9e-22 109.4 98 63.3
C02p21030 Brassica napus HOM05D004489 ORTHO05D010056 6.6e-22 108.6 168 45.2
C08p18050 Brassica napus HOM05D004489 ORTHO05D021897 6.6e-22 108.6 204 40.7
BolC8t49437H Brassica oleracea HOM05D004489 ORTHO05D021897 6.6e-22 108.6 204 40.7
BcaC04g20961 Brassica carinata HOM05D004489 ORTHO05D032456 1.1e-21 107.8 95 64.2
BcaB08g35381 Brassica carinata HOM05D004489 ORTHO05D091739 1.9e-21 107.1 164 45.7
BcaC03g15256 Brassica carinata HOM05D004489 ORTHO05D010056 1.9e-21 107.1 185 46.5
C01p27340 Brassica napus HOM05D004489 ORTHO05D010056 4.3e-21 105.9 91 69.2
BraA02t07746Z Brassica rapa HOM05D004489 ORTHO05D018788 4.3e-21 105.9 175 44.0
BolC5t30898H Brassica oleracea HOM05D004489 ORTHO05D010056 5.6e-21 105.5 135 50.4
C05p22010 Brassica napus HOM05D004489 ORTHO05D010056 7.3e-21 105.1 135 50.4
A04p09860 Brassica napus HOM05D004489 ORTHO05D010056 1.3e-20 104.4 91 70.3
C07p01700 Brassica napus HOM05D004489 ORTHO05D010056 1.3e-20 104.4 81 72.8
BcaC06g36646 Brassica carinata HOM05D004489 ORTHO05D010056 1.6e-20 104.0 129 50.4
C06p25970 Brassica napus HOM05D004489 ORTHO05D021897 1.6e-20 104.0 135 48.9
BcaC03g17739 Brassica carinata HOM05D004489 ORTHO05D010056 2.1e-20 103.6 84 71.4
BcaC04g21271 Brassica carinata HOM05D004489 ORTHO05D039740 2.1e-20 103.6 188 41.0
BcaB03g16167 Brassica carinata HOM05D004489 ORTHO05D091635 2.8e-20 103.2 232 37.1
C07p20720 Brassica napus HOM05D004489 ORTHO05D010056 2.8e-20 103.2 170 43.5
BolC2t08244H Brassica oleracea HOM05D004489 ORTHO05D010056 8.1e-20 101.7 71 76.1
A05p21690 Brassica napus HOM05D004489 ORTHO05D100974 1.4e-19 100.9 175 42.3
BcaB03g16202 Brassica carinata HOM05D004489 ORTHO05D093905 5.3e-19 99.0 131 48.1
BcaB01g01214 Brassica carinata HOM05D004489 ORTHO05D000740 6.9e-19 98.6 226 37.2
C09p55140 Brassica napus HOM05D004489 ORTHO05D010056 1.2e-18 97.8 71 73.2
BcaB01g01689 Brassica carinata HOM05D004489 ORTHO05D095684 2.0e-18 97.1 152 44.1
BcaB04g18048 Brassica carinata HOM05D004489 ORTHO05D091089 2.0e-18 97.1 88 63.6
BraA06t25443Z Brassica rapa HOM05D004489 ORTHO05D010056 2.0e-18 97.1 81 70.4
BcaB03g16455 Brassica carinata HOM05D004489 ORTHO05D005643 3.4e-18 96.3 232 35.8
BcaB03g16158 Brassica carinata HOM05D004489 ORTHO05D091594 4.5e-18 95.9 99 57.6
BcaB04g17639 Brassica carinata HOM05D008277 ORTHO05D011446 1.3e-17 94.4 158 43.0
A01p27750 Brassica napus HOM05D004489 ORTHO05D000199 2.2e-17 93.6 68 77.9
BolC6t37769H Brassica oleracea HOM05D004489 ORTHO05D010056 2.2e-17 93.6 76 71.1
BcaB07g33397 Brassica carinata HOM05D004489 ORTHO05D000740 3.8e-17 92.8 225 36.4
BcaB04g17006 Brassica carinata HOM05D004489 ORTHO05D092589 4.9e-17 92.4 104 54.8
BcaNung05365 Brassica carinata HOM05D004489 ORTHO05D094850 1.1e-16 91.3 60 76.7
BcaB08g35162 Brassica carinata HOM05D000888 ORTHO05D000740 2.4e-16 90.1 159 42.1
C09p37510 Brassica napus HOM05D004489 ORTHO05D032456 9.3e-16 88.2 149 44.3
BolC9t56581H Brassica oleracea HOM05D004489 ORTHO05D032456 9.3e-16 88.2 149 44.3
BcaB05g23045 Brassica carinata HOM05D008277 ORTHO05D093753 1.6e-15 87.4 93 59.1
BcaC01g03828 Brassica carinata HOM05D004489 ORTHO05D010056 1.6e-15 87.4 72 69.4
BcaB02g11425 Brassica carinata HOM05D000888 ORTHO05D000740 1.8e-14 84.0 199 37.2
BraA09t38666Z Brassica rapa HOM05D004489 ORTHO05D010056 2.3e-14 83.6 88 55.7
BcaC09g48389 Brassica carinata HOM05D004489 ORTHO05D010056 1.1e-13 81.3 129 43.4
A05p21970 Brassica napus HOM05D010967 ORTHO05D028117 9.0e-11 71.6 93 50.5
BcaC01g02601 Brassica carinata HOM05D004489 ORTHO05D093224 1.5e-10 70.9 55 72.7
BcaB04g17769 Brassica carinata HOM05D004489 ORTHO05D096269 2.6e-10 70.1 117 44.4
BcaB07g33270 Brassica carinata HOM05D000888 ORTHO05D000740 5.8e-10 68.9 184 32.6
A03p48290 Brassica napus HOM05D010967 ORTHO05D028117 7.6e-10 68.6 93 49.5
A06p28060 Brassica napus HOM05D010967 ORTHO05D017683 7.6e-10 68.6 87 51.7
BraA01t03541Z Brassica rapa HOM05D010967 ORTHO05D028117 7.6e-10 68.6 93 49.5
BraA09t38594Z Brassica rapa HOM05D010967 ORTHO05D028117 7.6e-10 68.6 93 49.5
BcaB08g35276 Brassica carinata HOM05D008277 ORTHO05D091063 1.7e-09 67.4 44 72.7
BcaC08g44969 Brassica carinata HOM05D004489 ORTHO05D010056 2.2e-09 67.0 112 41.1
A05p23080 Brassica napus HOM05D010967 ORTHO05D017683 2.2e-09 67.0 90 50.0
BcaB08g35275 Brassica carinata HOM05D004489 ORTHO05D093088 4.9e-09 65.9 74 51.4
A01p19980 Brassica napus HOM05D010967 ORTHO05D017683 6.4e-09 65.5 90 48.9
BraA01t02827Z Brassica rapa HOM05D010967 ORTHO05D017683 6.4e-09 65.5 90 48.9
A09p35600 Brassica napus HOM05D010967 ORTHO05D017683 8.4e-09 65.1 90 48.9
BcaB02g06508 Brassica carinata HOM05D004489 ORTHO05D094292 1.4e-08 64.3 153 35.9
A01p34440 Brassica napus HOM05D010967 ORTHO05D017683 1.4e-08 64.3 90 48.9
A05p17100 Brassica napus HOM05D010967 ORTHO05D017683 1.4e-08 64.3 90 48.9
A09p48280 Brassica napus HOM05D010967 ORTHO05D017683 1.4e-08 64.3 90 48.9
BolC3t17100H Brassica oleracea HOM05D004489 ORTHO05D042334 2.5e-08 63.5 64 56.2
BraA01t02558Z Brassica rapa HOM05D010967 ORTHO05D108345 2.5e-08 63.5 88 48.9
BraA05t21163Z Brassica rapa HOM05D010967 ORTHO05D108496 3.2e-08 63.2 64 60.9
A04p09850 Brassica napus HOM05D004489 ORTHO05D042334 7.1e-08 62.0 63 58.7
BcaC05g26627 Brassica carinata HOM05D004489 ORTHO05D010056 1.2e-07 61.2 48 64.6
A03p58810 Brassica napus HOM05D010967 ORTHO05D017683 1.6e-07 60.8 86 47.7
BraA02t08312Z Brassica rapa HOM05D010967 ORTHO05D108770 2.1e-07 60.5 64 59.4
BraA07t28506Z Brassica rapa HOM05D010967 ORTHO05D108156 1.8e-06 57.4 86 47.7
BolC6t37761H Brassica oleracea HOM05D004489 ORTHO05D104721 6.7e-06 55.5 100 39.0


User provided reference genes

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