Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g36010 Brassica carinata HOM05D000397 ORTHO05D000492 1.3e-45 186.0 92 100.0
BcaC06g36014 Brassica carinata HOM05D000397 ORTHO05D000492 4.8e-45 184.1 91 98.9
BcaB03g16266 Brassica carinata HOM05D000397 ORTHO05D000492 8.8e-39 163.3 91 86.8
Sp1g39580 Schrenkiella parvula HOM05D000397 ORTHO05D000492 1.2e-27 126.3 90 68.9
C07p09050 Brassica napus HOM05D000397 ORTHO05D000492 7.2e-25 117.1 58 98.3
Thhalv10011411m.g Eutrema salsugineum HOM05D000397 ORTHO05D000492 4.7e-24 114.4 82 69.5
BcaB07g33365 Brassica carinata HOM05D000397 ORTHO05D000492 2.8e-21 105.1 90 58.9
A06p01300 Brassica napus HOM05D000397 ORTHO05D000492 4.1e-20 101.3 86 62.8
BraA06t23356Z Brassica rapa HOM05D000397 ORTHO05D000492 4.1e-20 101.3 86 62.8
BcaC08g43488 Brassica carinata HOM05D000397 ORTHO05D000492 7.0e-20 100.5 91 56.0
C06p08720 Brassica napus HOM05D000397 ORTHO05D000492 7.0e-20 100.5 91 56.0
BolC6t35948H Brassica oleracea HOM05D000397 ORTHO05D000492 7.0e-20 100.5 91 56.0
Carub.0003s2577 Capsella rubella HOM05D000397 ORTHO05D000492 6.5e-18 94.0 93 63.4
A05p18720 Brassica napus HOM05D000397 ORTHO05D000492 2.5e-17 92.0 74 68.9
BcaB02g10964 Brassica carinata HOM05D000397 ORTHO05D000492 4.2e-17 91.3 79 65.8
Carub.0001s4217 Capsella rubella HOM05D000397 ORTHO05D000492 3.6e-16 88.2 102 56.9
AT1G53025 Arabidopsis thaliana HOM05D000397 ORTHO05D000492 4.7e-16 87.8 115 52.2
BcaC08g44026 Brassica carinata HOM05D000397 ORTHO05D000492 6.1e-16 87.4 83 60.2
AL1G61370 Arabidopsis lyrata HOM05D000397 ORTHO05D000492 1.8e-15 85.9 116 50.9
C03p90960 Brassica napus HOM05D000397 ORTHO05D000492 3.0e-15 85.1 80 56.2
C06p14360 Brassica napus HOM05D000397 ORTHO05D000492 6.8e-15 84.0 83 59.0
BolC6t36615H Brassica oleracea HOM05D000397 ORTHO05D000492 6.8e-15 84.0 83 59.0
A08p01860 Brassica napus HOM05D000397 ORTHO05D000492 4.4e-14 81.3 80 53.8
BcaB04g17129 Brassica carinata HOM05D000397 ORTHO05D000492 7.5e-14 80.5 82 59.8
BraA08t32238Z Brassica rapa HOM05D000397 ORTHO05D000492 1.7e-13 79.3 80 52.5
BcaC01g01352 Brassica carinata HOM05D000397 ORTHO05D000492 3.7e-13 78.2 80 52.5
BolC3t21421H Brassica oleracea HOM05D000397 ORTHO05D000492 3.7e-13 78.2 80 52.5
BcaC08g43489 Brassica carinata HOM05D000397 ORTHO05D000492 4.9e-13 77.8 65 64.6
CARHR043240 Cardamine hirsuta HOM05D000397 ORTHO05D000492 4.9e-13 77.8 116 48.3
THA.LOC104810477 Tarenaya hassleriana HOM05D000397 ORTHO05D000492 1.5e-09 66.2 57 63.2
AT3G15355 Arabidopsis thaliana HOM05D000397 ORTHO05D000492 2.1e-08 62.4 84 47.6
THA.LOC104815551 Tarenaya hassleriana HOM05D000397 ORTHO05D000492 5.2e-07 57.8 64 53.1
CARHR090390 Cardamine hirsuta HOM05D000397 ORTHO05D000492 2.0e-06 55.8 54 57.4
Aa31LG8G2580 Aethionema arabicum HOM05D000397 ORTHO05D000492 7.5e-06 53.9 57 54.4


User provided reference genes

Program Settings