Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g35975 Brassica carinata HOM05D004128 ORTHO05D008395 5.0e-134 481.5 317 100.0
A08p09180 Brassica napus HOM05D004128 ORTHO05D008395 2.7e-127 459.1 325 90.5
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 1.7e-126 456.4 327 90.2
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 6.8e-107 391.3 332 73.2
BcaC03g15146 Brassica carinata HOM05D004128 ORTHO05D008395 8.9e-99 364.4 338 69.5
BolC8t47837H Brassica oleracea HOM05D004128 ORTHO05D008395 2.9e-97 359.4 349 64.5
A03p58160 Brassica napus HOM05D004128 ORTHO05D008395 3.8e-89 332.4 206 93.2
BcaC03g14469 Brassica carinata HOM05D004128 ORTHO05D008395 1.2e-74 284.3 395 59.0
BcaC07g37515 Brassica carinata HOM05D004128 ORTHO05D008395 2.2e-73 280.0 336 58.6
BraA09t38520Z Brassica rapa HOM05D004128 ORTHO05D008395 7.4e-61 238.4 233 66.1
BcaC04g20967 Brassica carinata HOM05D004128 ORTHO05D008395 9.7e-61 238.0 246 68.3
C09p37460 Brassica napus HOM05D004128 ORTHO05D008395 9.7e-61 238.0 246 68.3
BcaC06g33999 Brassica carinata HOM05D004128 ORTHO05D008395 2.6e-53 213.4 214 75.2
A01p28280 Brassica napus HOM05D004128 ORTHO05D017536 5.9e-42 175.6 106 97.2
BcaC02g10649 Brassica carinata HOM05D004128 ORTHO05D017536 1.0e-41 174.9 218 55.5
A07p17750 Brassica napus HOM05D004128 ORTHO05D017536 5.5e-40 169.1 102 98.0
BraA07t29497Z Brassica rapa HOM05D004128 ORTHO05D017536 9.4e-40 168.3 106 95.3
BraA08t33243Z Brassica rapa HOM05D004128 ORTHO05D017536 2.0e-34 150.6 104 78.8
BcaC01g00586 Brassica carinata HOM05D007203 ORTHO05D031716 1.3e-33 147.9 322 46.0
BcaC01g03026 Brassica carinata HOM05D007203 ORTHO05D031716 1.5e-32 144.4 215 58.6
BraA08t33244Z Brassica rapa HOM05D004128 ORTHO05D008395 1.5e-32 144.4 83 97.6
C03p57000 Brassica napus HOM05D007203 ORTHO05D031716 1.2e-31 141.4 83 96.4
BcaB05g23656 Brassica carinata HOM05D004128 ORTHO05D008395 5.2e-30 136.0 357 41.2
BolC6t37871H Brassica oleracea HOM05D004128 ORTHO05D008395 2.8e-28 130.2 165 67.3
C04p26210 Brassica napus HOM05D004128 ORTHO05D017536 3.7e-28 129.8 104 73.1
BolC4t24185H Brassica oleracea HOM05D004128 ORTHO05D017536 3.7e-28 129.8 104 73.1
BolC2t08771H Brassica oleracea HOM05D004128 ORTHO05D017536 2.4e-27 127.1 104 72.1
BcaC07g37436 Brassica carinata HOM05D004128 ORTHO05D008395 5.4e-27 125.9 67 98.5
BcaC08g45091 Brassica carinata HOM05D004128 ORTHO05D008395 1.2e-23 114.8 83 83.1
C04p26220 Brassica napus HOM05D004128 ORTHO05D040950 1.8e-22 110.9 122 56.6
BolC4t24184H Brassica oleracea HOM05D004128 ORTHO05D040950 1.8e-22 110.9 122 56.6
BolC7t43900H Brassica oleracea HOM05D004128 ORTHO05D008395 5.7e-21 105.9 67 83.6
BcaC08g43405 Brassica carinata HOM05D007203 ORTHO05D094647 3.8e-17 93.2 187 48.1
BcaB01g01921 Brassica carinata HOM05D007203 ORTHO05D011558 6.1e-15 85.9 382 37.7
BcaC02g12420 Brassica carinata HOM05D007203 ORTHO05D027555 1.8e-11 74.3 192 36.5
BcaC01g02783 Brassica carinata HOM05D004128 ORTHO05D008395 3.2e-11 73.6 51 70.6
BcaC02g08829 Brassica carinata HOM05D007203 ORTHO05D027555 9.2e-11 72.0 371 36.4
BcaC04g20090 Brassica carinata HOM05D004128 ORTHO05D008395 1.6e-10 71.2 74 62.2
A06p29400 Brassica napus HOM05D004128 ORTHO05D008395 1.6e-10 71.2 39 97.4
C01p48550 Brassica napus HOM05D004128 ORTHO05D008395 1.6e-10 71.2 39 97.4
C08p21910 Brassica napus HOM05D004128 ORTHO05D008395 1.6e-10 71.2 39 97.4
BolC9t57647H Brassica oleracea HOM05D004128 ORTHO05D024421 1.6e-10 71.2 74 62.2
BolC9t58725H Brassica oleracea HOM05D004128 ORTHO05D008395 1.6e-10 71.2 39 97.4
BcaB07g32839 Brassica carinata HOM05D004128 ORTHO05D008395 2.0e-10 70.9 74 56.8
BcaB04g17725 Brassica carinata HOM05D004128 ORTHO05D008395 2.7e-10 70.5 74 56.8
C03p60470 Brassica napus HOM05D004128 ORTHO05D008395 4.6e-10 69.7 39 94.9
C03p35510 Brassica napus HOM05D004128 ORTHO05D008395 5.9e-10 69.3 39 94.9
BcaC09g51181 Brassica carinata HOM05D004128 ORTHO05D024421 5.0e-09 66.2 87 55.2
C01p16000 Brassica napus HOM05D007203 ORTHO05D097579 5.0e-09 66.2 87 55.2
BolC6t36978H Brassica oleracea HOM05D004128 ORTHO05D008395 5.0e-09 66.2 68 58.8
BolC2t09432H Brassica oleracea HOM05D004128 ORTHO05D008395 1.5e-08 64.7 36 97.2
BcaC02g09038 Brassica carinata HOM05D004128 ORTHO05D008395 2.5e-08 63.9 41 75.6
C06p11120 Brassica napus HOM05D007203 ORTHO05D027555 4.7e-07 59.7 64 60.9
BcaNung01161 Brassica carinata HOM05D007203 ORTHO05D011558 1.4e-06 58.2 336 36.0
C05p41890 Brassica napus HOM05D004128 ORTHO05D024421 2.3e-06 57.4 271 38.0
BcaB04g18992 Brassica carinata HOM05D004128 ORTHO05D095711 3.1e-06 57.0 71 54.9
BcaB05g22460 Brassica carinata HOM05D008735 ORTHO05D094962 3.1e-06 57.0 71 54.9
C04p49980 Brassica napus HOM05D007203 ORTHO05D027555 8.9e-06 55.5 60 61.7
BraA09t37753Z Brassica rapa HOM05D007203 ORTHO05D013810 8.9e-06 55.5 69 50.7


User provided reference genes

Program Settings