Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g35968 Brassica carinata HOM05D003421 ORTHO05D003268 3.0e-162 575.1 289 100.0
BolC2t09439H Brassica oleracea HOM05D003421 ORTHO05D003268 9.1e-66 254.6 231 61.5
BolC7t42918H Brassica oleracea HOM05D003421 ORTHO05D003268 9.7e-60 234.6 208 62.0
BcaC04g20964 Brassica carinata HOM05D003421 ORTHO05D003268 5.3e-58 228.8 214 55.6
BolC3t19281H Brassica oleracea HOM05D003421 ORTHO05D003268 1.2e-54 217.6 214 51.4
BolC1t03345H Brassica oleracea HOM05D003421 ORTHO05D003268 6.8e-53 211.8 194 60.8
BolC9t56870H Brassica oleracea HOM05D003421 ORTHO05D003268 2.0e-52 210.3 202 54.5
BolC4t23987H Brassica oleracea HOM05D003421 ORTHO05D003268 1.1e-47 194.5 115 82.6
BolC8t47709H Brassica oleracea HOM05D003421 ORTHO05D003268 6.3e-43 178.7 229 50.7
BolC2t10336H Brassica oleracea HOM05D003421 ORTHO05D003268 7.8e-41 171.8 215 46.0
BolC3t19358H Brassica oleracea HOM05D003421 ORTHO05D003268 2.6e-36 156.8 171 48.5
BolC8t48271H Brassica oleracea HOM05D003421 ORTHO05D003268 3.4e-36 156.4 257 44.0
BraA01t02722Z Brassica rapa HOM05D003421 ORTHO05D003268 1.3e-35 154.5 178 46.1
BolC5t33453H Brassica oleracea HOM05D003421 ORTHO05D003268 7.0e-34 148.7 191 41.4
BolC2t09874H Brassica oleracea HOM05D003421 ORTHO05D003268 4.6e-33 146.0 185 46.5
BolC7t41400H Brassica oleracea HOM05D003421 ORTHO05D003268 1.9e-31 140.6 105 68.6
BolC9t56748H Brassica oleracea HOM05D003421 ORTHO05D003268 2.8e-30 136.7 236 37.7
BraA01t02926Z Brassica rapa HOM05D003421 ORTHO05D003268 9.8e-28 128.3 91 71.4
BolC9t56013H Brassica oleracea HOM05D003421 ORTHO05D003268 2.4e-26 123.6 195 43.6
BolC4t23765H Brassica oleracea HOM05D003421 ORTHO05D003268 2.1e-25 120.6 244 34.0
BcaC02g10758 Brassica carinata HOM05D003421 ORTHO05D003268 2.7e-25 120.2 118 50.0
BolC1t03978H Brassica oleracea HOM05D003421 ORTHO05D003268 6.0e-25 119.0 200 40.5
BolC8t47514H Brassica oleracea HOM05D003421 ORTHO05D003268 1.9e-23 114.0 263 31.9
BolC4t25137H Brassica oleracea HOM05D003421 ORTHO05D003268 2.5e-23 113.6 187 39.6
BolC4t24296H Brassica oleracea HOM05D003421 ORTHO05D003268 2.8e-22 110.2 99 60.6
BcaC08g43964 Brassica carinata HOM05D003421 ORTHO05D003268 4.0e-21 106.3 101 58.4
BraA06t25464Z Brassica rapa HOM05D008596 ORTHO05D003268 5.8e-20 102.4 189 33.9
BolC3t19165H Brassica oleracea HOM05D003421 ORTHO05D003268 6.0e-17 92.4 160 36.9
BcaC07g37480 Brassica carinata HOM05D007986 ORTHO05D003268 7.8e-17 92.0 153 36.6
BolC2t10401H Brassica oleracea HOM05D007986 ORTHO05D003268 1.5e-15 87.8 174 33.3
A08p08190 Brassica napus HOM05D008596 ORTHO05D003268 7.3e-15 85.5 266 30.1
A01p26930 Brassica napus HOM05D008596 ORTHO05D003268 2.8e-14 83.6 141 33.3
BolC7t41565H Brassica oleracea HOM05D003421 ORTHO05D003268 6.2e-14 82.4 45 88.9
BcaC05g27617 Brassica carinata HOM05D007986 ORTHO05D003268 4.0e-13 79.7 101 43.6
BolC4t24275H Brassica oleracea HOM05D007986 ORTHO05D003268 6.8e-13 79.0 181 34.8
BolC5t32328H Brassica oleracea HOM05D007986 ORTHO05D003268 2.0e-12 77.4 101 42.6
A05p19660 Brassica napus HOM05D008596 ORTHO05D003268 2.6e-12 77.0 162 32.7
A06p23500 Brassica napus HOM05D008596 ORTHO05D003268 2.6e-12 77.0 132 37.1
BNapus_Darmor_BZH_scaffold_294p00010 Brassica napus HOM05D008596 ORTHO05D003268 3.4e-12 76.6 101 42.6
BolC5t31599H Brassica oleracea HOM05D007986 ORTHO05D013025 3.4e-12 76.6 162 34.6
BcaC03g16524 Brassica carinata HOM05D007986 ORTHO05D003268 6.4e-11 72.4 95 43.2
BcaC05g28691 Brassica carinata HOM05D008969 ORTHO05D003268 6.4e-11 72.4 236 28.8
BcaB08g34673 Brassica carinata HOM05D007986 ORTHO05D003268 1.4e-10 71.2 131 35.1
BcaC06g36330 Brassica carinata HOM05D003421 ORTHO05D003268 1.9e-10 70.9 182 32.4
BraA09t38727Z Brassica rapa HOM05D007986 ORTHO05D003268 3.2e-10 70.1 175 32.6
BraA09t38708Z Brassica rapa HOM05D003421 ORTHO05D027538 5.4e-10 69.3 69 55.1
BcaC05g28707 Brassica carinata HOM05D003421 ORTHO05D095115 7.1e-10 68.9 53 66.0
C08p08930 Brassica napus HOM05D008596 ORTHO05D032749 9.3e-10 68.6 94 40.4
BcaB01g01343 Brassica carinata HOM05D003421 ORTHO05D032085 1.2e-09 68.2 128 34.4
C03p67380 Brassica napus HOM05D008596 ORTHO05D027031 2.1e-09 67.4 174 32.8
A03p66670 Brassica napus HOM05D008596 ORTHO05D003268 3.5e-09 66.6 162 29.0
BolC8t47737H Brassica oleracea HOM05D008596 ORTHO05D032749 7.8e-09 65.5 94 39.4
BolC3t19083H Brassica oleracea HOM05D007986 ORTHO05D003268 3.0e-08 63.5 83 41.0
BcaB07g33058 Brassica carinata HOM05D003421 ORTHO05D003268 3.9e-08 63.2 119 36.1
A01p26540 Brassica napus HOM05D003421 ORTHO05D003268 5.1e-08 62.8 120 31.7
BolC9t55761H Brassica oleracea HOM05D007986 ORTHO05D003268 5.1e-08 62.8 94 37.2
BolC2t10267H Brassica oleracea HOM05D003421 ORTHO05D003268 8.7e-08 62.0 60 46.7
BolC5t31483H Brassica oleracea HOM05D028664 ORTHO05D032055 8.7e-08 62.0 87 40.2
A05p29660 Brassica napus HOM05D008596 ORTHO05D003268 1.5e-07 61.2 132 32.6
A03p68840 Brassica napus HOM05D008596 ORTHO05D003268 2.5e-07 60.5 122 31.1
BolC7t42082H Brassica oleracea HOM05D003421 ORTHO05D003268 2.5e-07 60.5 50 54.0
BraA05t21116Z Brassica rapa HOM05D008596 ORTHO05D003268 2.5e-07 60.5 75 44.0
BraSC39t46179Z Brassica rapa HOM05D008596 ORTHO05D003268 2.5e-07 60.5 122 31.1
A05p24140 Brassica napus HOM05D008596 ORTHO05D003268 7.3e-07 58.9 95 38.9
BcaB06g27774 Brassica carinata HOM05D007986 ORTHO05D003268 1.6e-06 57.8 86 39.5
BcaC06g35838 Brassica carinata HOM05D003421 ORTHO05D092168 2.1e-06 57.4 43 74.4
BraA06t25541Z Brassica rapa HOM05D008596 ORTHO05D003268 2.1e-06 57.4 74 44.6
BcaB08g35568 Brassica carinata HOM05D002377 ORTHO05D002656 4.8e-06 56.2 79 41.8
BcaC05g26914 Brassica carinata HOM05D003421 ORTHO05D003268 8.1e-06 55.5 55 47.3
BcaC06g35911 Brassica carinata HOM05D003421 ORTHO05D003268 8.1e-06 55.5 42 52.4
BraA05t21054Z Brassica rapa HOM05D007986 ORTHO05D003268 8.1e-06 55.5 103 35.0


User provided reference genes

Program Settings