Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g35967 Brassica carinata HOM05D008792 ORTHO05D014929 2.9e-67 258.5 133 100.0
BcaC05g27788 Brassica carinata HOM05D026218 ORTHO05D027630 1.5e-18 96.7 61 83.6
BolC2t10642H Brassica oleracea HOM05D008792 ORTHO05D018580 3.3e-18 95.5 60 85.0
BcaC04g20896 Brassica carinata HOM05D008792 ORTHO05D092652 5.5e-18 94.7 60 83.3
BolC9t56441H Brassica oleracea HOM05D008792 ORTHO05D000880 3.6e-17 92.0 102 55.9
BraA01t02919Z Brassica rapa HOM05D008792 ORTHO05D018580 5.2e-16 88.2 60 76.7
BcaC01g02178 Brassica carinata HOM05D008792 ORTHO05D014999 2.0e-15 86.3 57 84.2
BcaC04g20886 Brassica carinata HOM05D008792 ORTHO05D018580 2.6e-15 85.9 53 84.9
BcaC01g02196 Brassica carinata HOM05D008792 ORTHO05D018580 1.4e-13 80.1 55 74.5
BcaC08g44588 Brassica carinata HOM05D008792 ORTHO05D018580 7.0e-13 77.8 54 72.2
BraA10t42913Z Brassica rapa HOM05D008792 ORTHO05D014929 4.5e-12 75.1 100 50.0
BolC7t41508H Brassica oleracea HOM05D008792 ORTHO05D014999 2.9e-11 72.4 56 69.6
BcaC08g42955 Brassica carinata HOM05D003421 ORTHO05D003268 4.3e-10 68.6 76 56.6
BolC7t41564H Brassica oleracea HOM05D003421 ORTHO05D027538 2.8e-09 65.9 76 53.9
BolC9t56693H Brassica oleracea HOM05D008792 ORTHO05D014929 3.1e-08 62.4 60 56.7
BolC1t03346H Brassica oleracea HOM05D008792 ORTHO05D000880 6.8e-08 61.2 57 57.9
BcaC09g49641 Brassica carinata HOM05D008792 ORTHO05D014929 1.2e-07 60.5 58 56.9
BolC2t10001H Brassica oleracea HOM05D000429 ORTHO05D000880 3.4e-07 58.9 60 53.3
BcaC09g49639 Brassica carinata HOM05D008792 ORTHO05D018580 4.4e-07 58.5 39 74.4
BcaC06g36462 Brassica carinata HOM05D008792 ORTHO05D014929 1.3e-06 57.0 64 53.1


User provided reference genes

Program Settings