Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g35740 Brassica carinata HOM05D010420 ORTHO05D012780 1.2e-88 329.7 162 100.0
C07p11450 Brassica napus HOM05D010420 ORTHO05D012780 2.8e-88 328.6 162 99.4
BolC7t41619H Brassica oleracea HOM05D010420 ORTHO05D012780 2.8e-88 328.6 162 99.4
BraA07t28558Z Brassica rapa HOM05D010420 ORTHO05D012780 5.8e-86 320.9 162 98.1
A07p07650 Brassica napus HOM05D010420 ORTHO05D012780 1.7e-85 319.3 162 97.5
C03p54120 Brassica napus HOM05D010420 ORTHO05D012780 2.2e-48 196.1 153 67.3
BraA03t13515Z Brassica rapa HOM05D010420 ORTHO05D012780 2.2e-48 196.1 153 66.7
BcaB06g26673 Brassica carinata HOM05D010420 ORTHO05D012780 2.8e-48 195.7 142 68.3
A03p43810 Brassica napus HOM05D010420 ORTHO05D012780 1.2e-46 190.3 153 65.4
BolC3t17703H Brassica oleracea HOM05D010420 ORTHO05D012780 1.2e-46 190.3 143 67.1
BcaC01g03271 Brassica carinata HOM05D010420 ORTHO05D012780 2.9e-45 185.7 141 66.0
CARHR120840 Cardamine hirsuta HOM05D010420 ORTHO05D012780 1.5e-41 173.3 118 70.3
BcaB05g22282 Brassica carinata HOM05D010420 ORTHO05D012780 5.9e-38 161.4 118 68.6
BcaB03g14574 Brassica carinata HOM05D010420 ORTHO05D012780 2.9e-37 159.1 163 55.8
CARHR120850 Cardamine hirsuta HOM05D010420 ORTHO05D012780 6.7e-34 147.9 94 74.5
Carub.0003s0969 Capsella rubella HOM05D010420 ORTHO05D012780 8.8e-34 147.5 161 55.3
AL7G46660 Arabidopsis lyrata HOM05D010420 ORTHO05D012780 1.8e-31 139.8 156 50.6
Carub.0007s3295 Capsella rubella HOM05D010420 ORTHO05D012780 4.7e-27 125.2 151 51.7
Carub.0007s3296 Capsella rubella HOM05D010420 ORTHO05D012780 3.0e-26 122.5 166 45.8
AL3G21840 Arabidopsis lyrata HOM05D010420 ORTHO05D012780 6.3e-24 114.8 103 61.2
THA.LOC104816675 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 3.1e-15 85.9 114 41.2
THA.LOC104816678 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 2.9e-13 79.3 101 42.6
THA.LOC104816681 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 1.4e-10 70.5 141 34.8
BcaB08g36803 Brassica carinata HOM05D003012 ORTHO05D002833 3.0e-10 69.3 130 36.9
BcaC06g35736 Brassica carinata HOM05D010420 ORTHO05D095208 3.0e-10 69.3 35 82.9
THA.LOC104816440 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 4.0e-10 68.9 138 34.8
THA.LOC104816439 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 1.2e-09 67.4 153 34.0
THA.LOC104816680 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 2.6e-09 66.2 134 32.1
C05p59030 Brassica napus HOM05D003012 ORTHO05D002833 3.7e-08 62.4 133 33.1
C09p60090 Brassica napus HOM05D003012 ORTHO05D002833 3.7e-08 62.4 144 31.9
BolC9t58844H Brassica oleracea HOM05D003012 ORTHO05D002833 3.7e-08 62.4 144 31.9
Thhalv10022372m.g Eutrema salsugineum HOM05D003012 ORTHO05D002833 3.7e-08 62.4 98 36.7
THA.LOC104816435 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 4.9e-08 62.0 142 29.6
THA.LOC104811406 Tarenaya hassleriana HOM05D008344 ORTHO05D011034 6.3e-08 61.6 123 27.6
THA.LOC104815224 Tarenaya hassleriana HOM05D008344 ORTHO05D011034 6.3e-08 61.6 123 27.6
A10p22270 Brassica napus HOM05D003012 ORTHO05D002833 1.8e-07 60.1 146 32.2
BraA10t44286Z Brassica rapa HOM05D003012 ORTHO05D002833 1.8e-07 60.1 146 32.2
THA.LOC104816438 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 3.1e-07 59.3 138 30.4
Aa31LG11G5250 Aethionema arabicum HOM05D013273 ORTHO05D002833 5.4e-07 58.5 104 35.6
A08p18200 Brassica napus HOM05D003012 ORTHO05D002833 5.4e-07 58.5 93 36.6
CARHR291870 Cardamine hirsuta HOM05D003012 ORTHO05D002833 5.4e-07 58.5 125 31.2
C01p10500 Brassica napus HOM05D008344 ORTHO05D011034 1.2e-06 57.4 121 34.7
BolC1t01009H Brassica oleracea HOM05D008344 ORTHO05D011034 1.2e-06 57.4 121 34.7
Cpa.g.sc59.131 Carica papaya HOM05D000256 ORTHO05D000119 1.2e-06 57.4 117 30.8
BraA08t33773Z Brassica rapa HOM05D003012 ORTHO05D002833 2.0e-06 56.6 113 33.6
A01p08960 Brassica napus HOM05D008344 ORTHO05D011034 2.7e-06 56.2 121 33.9
BraA01t00842Z Brassica rapa HOM05D008344 ORTHO05D011034 2.7e-06 56.2 121 33.9
BcaB03g12743 Brassica carinata HOM05D003012 ORTHO05D002833 3.5e-06 55.8 121 32.2
BcaNung05794 Brassica carinata HOM05D000149 ORTHO05D000076 3.5e-06 55.8 128 29.7
A10p22280 Brassica napus HOM05D003012 ORTHO05D002833 4.5e-06 55.5 132 30.3
BcaC04g18834 Brassica carinata HOM05D003012 ORTHO05D002833 7.7e-06 54.7 135 31.1
C09p60100 Brassica napus HOM05D003012 ORTHO05D002833 7.7e-06 54.7 135 31.1
BolC9t58845H Brassica oleracea HOM05D003012 ORTHO05D002833 7.7e-06 54.7 135 31.1


User provided reference genes

Program Settings