Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g35737 Brassica carinata HOM05D000792 ORTHO05D014974 4.1e-33 144.1 69 100.0
C07p11470 Brassica napus HOM05D000792 ORTHO05D014974 4.1e-33 144.1 69 100.0
BolC7t41623H Brassica oleracea HOM05D000792 ORTHO05D014974 4.1e-33 144.1 69 100.0
A03p68270 Brassica napus HOM05D000792 ORTHO05D014974 5.1e-31 137.1 69 94.2
BraA01t02641Z Brassica rapa HOM05D000792 ORTHO05D014974 5.1e-31 137.1 69 94.2
BcaB01g01536 Brassica carinata HOM05D000792 ORTHO05D014974 1.5e-22 109.0 69 76.8
BcaB02g07909 Brassica carinata HOM05D000792 ORTHO05D001021 3.8e-18 94.4 56 85.7
BcaC08g44509 Brassica carinata HOM05D000792 ORTHO05D001021 3.8e-18 94.4 56 85.7
A07p20690 Brassica napus HOM05D000792 ORTHO05D001021 3.8e-18 94.4 56 85.7
C06p19610 Brassica napus HOM05D000792 ORTHO05D001021 3.8e-18 94.4 56 85.7
BolC6t37154H Brassica oleracea HOM05D000792 ORTHO05D001021 3.8e-18 94.4 56 85.7
BraA07t29760Z Brassica rapa HOM05D000792 ORTHO05D001021 3.8e-18 94.4 56 85.7
A04p14170 Brassica napus HOM05D000792 ORTHO05D001021 6.4e-18 93.6 56 83.9
C04p48200 Brassica napus HOM05D000792 ORTHO05D001021 6.4e-18 93.6 56 83.9
BolC4t26412H Brassica oleracea HOM05D000792 ORTHO05D001021 6.4e-18 93.6 56 83.9
BraA04t17077Z Brassica rapa HOM05D000792 ORTHO05D001021 6.4e-18 93.6 56 83.9
Thhalv10027670m.g Eutrema salsugineum HOM05D000792 ORTHO05D001021 2.4e-17 91.7 56 82.1
AL7G48380 Arabidopsis lyrata HOM05D000792 ORTHO05D001021 5.4e-17 90.5 56 80.4
AT5G41130 Arabidopsis thaliana HOM05D000792 ORTHO05D001021 7.1e-17 90.1 56 80.4
BcaB06g27600 Brassica carinata HOM05D000792 ORTHO05D001021 7.1e-17 90.1 56 80.4
A08p07340 Brassica napus HOM05D000792 ORTHO05D001021 1.2e-16 89.4 67 67.2
Sp7g00770 Schrenkiella parvula HOM05D000792 ORTHO05D001021 2.1e-16 88.6 56 78.6
Carub.0007s3434 Capsella rubella HOM05D000792 ORTHO05D001021 6.0e-16 87.0 56 76.8
BraA08t32748Z Brassica rapa HOM05D000792 ORTHO05D001021 1.7e-15 85.5 56 75.0
AL7G48430 Arabidopsis lyrata HOM05D000792 ORTHO05D001021 3.0e-15 84.7 56 75.0
AT5G41120 Arabidopsis thaliana HOM05D000792 ORTHO05D001021 3.9e-15 84.3 56 75.0
C08p09040 Brassica napus HOM05D000792 ORTHO05D001021 6.6e-15 83.6 58 72.4
BolC8t47750H Brassica oleracea HOM05D000792 ORTHO05D001021 6.6e-15 83.6 56 73.2
C06p37270 Brassica napus HOM05D024359 ORTHO05D014974 8.7e-15 83.2 46 89.1
Aa31LG9G710 Aethionema arabicum HOM05D000792 ORTHO05D001021 1.1e-14 82.8 56 71.4
BraA06t25616Z Brassica rapa HOM05D000792 ORTHO05D014974 1.5e-14 82.4 50 82.0
BcaC07g37427 Brassica carinata HOM05D000792 ORTHO05D001021 1.9e-14 82.0 56 73.2
C02p39010 Brassica napus HOM05D024359 ORTHO05D014974 4.3e-14 80.9 46 84.8
BolC2t09913H Brassica oleracea HOM05D024359 ORTHO05D014974 4.3e-14 80.9 46 84.8
A06p26840 Brassica napus HOM05D000792 ORTHO05D014974 1.3e-13 79.3 46 84.8
CARHR213250 Cardamine hirsuta HOM05D000792 ORTHO05D001021 1.6e-13 79.0 56 71.4
Carub.0007s3437 Capsella rubella HOM05D000792 ORTHO05D001021 2.8e-13 78.2 56 67.9
BcaB02g07907 Brassica carinata HOM05D000792 ORTHO05D001021 6.2e-13 77.0 47 83.0
GSVIVG01033023001 Vitis vinifera HOM05D000792 ORTHO05D001021 1.3e-10 69.3 56 53.6
THA.LOC104805313 Tarenaya hassleriana HOM05D000792 ORTHO05D001021 2.2e-10 68.6 56 60.7
THA.LOC104823992 Tarenaya hassleriana HOM05D000792 ORTHO05D001021 3.8e-10 67.8 56 55.4
Duzib187G1490 Durio zibethinus HOM05D000792 ORTHO05D001021 1.1e-09 66.2 56 58.9
CiPaw.04G002600 Carya illinoinensis HOM05D000792 ORTHO05D001021 1.4e-09 65.9 56 55.4
CiPaw.03G003800 Carya illinoinensis HOM05D000792 ORTHO05D001021 2.4e-09 65.1 55 58.2
MD09G1005800 Malus domestica HOM05D000792 ORTHO05D001021 2.4e-09 65.1 56 57.1
Prupe.3G311200 Prunus persica HOM05D000792 ORTHO05D001021 2.4e-09 65.1 56 57.1
Dinv25628 Davidia involucrata HOM05D000792 ORTHO05D001021 3.2e-09 64.7 56 55.4
Thecc.04G043500 Theobroma cacao HOM05D000792 ORTHO05D001021 3.2e-09 64.7 56 57.1
vmacro05988 Vaccinium macrocarpon HOM05D000792 ORTHO05D001021 5.4e-09 63.9 56 57.1
vmacro23368 Vaccinium macrocarpon HOM05D000792 ORTHO05D001021 5.4e-09 63.9 56 57.1
Ciclev10014452m.g Citrus clementina HOM05D000792 ORTHO05D001021 9.3e-09 63.2 56 57.1
AT3G26820 Arabidopsis thaliana HOM05D000792 ORTHO05D001021 1.2e-08 62.8 51 60.8
CANSAT64G0925 Cannabis sativa HOM05D000792 ORTHO05D001021 1.6e-08 62.4 56 55.4
Ca_08107_v3 Cicer arietinum L. HOM05D000792 ORTHO05D001021 1.6e-08 62.4 56 53.6
Gohir.A09G001100 Gossypium hirsutum HOM05D000792 ORTHO05D001021 2.1e-08 62.0 56 53.6
Gohir.D09G000900 Gossypium hirsutum HOM05D000792 ORTHO05D001021 2.1e-08 62.0 56 53.6
Gorai.006G001000 Gossypium raimondii HOM05D000792 ORTHO05D001021 2.1e-08 62.0 56 53.6
TWI60G1375 Tripterygium wilfordii HOM05D000792 ORTHO05D001021 2.1e-08 62.0 56 55.4
AL5G15810 Arabidopsis lyrata HOM05D000792 ORTHO05D001021 2.7e-08 61.6 56 53.6
Haze_14923 Corylus avellana HOM05D000792 ORTHO05D001021 2.7e-08 61.6 56 51.8
Atru.chr6.2658 Acer truncatum HOM05D000792 ORTHO05D001021 3.5e-08 61.2 56 53.6
Solyc02g094430.4 Solanum lycopersicum HOM05D000792 ORTHO05D001021 3.5e-08 61.2 56 53.6
AL5G15770 Arabidopsis lyrata HOM05D000792 ORTHO05D001021 4.6e-08 60.8 51 56.9
CARHR147910 Cardamine hirsuta HOM05D000792 ORTHO05D001021 4.6e-08 60.8 56 53.6
Duzib147G0486 Durio zibethinus HOM05D000792 ORTHO05D001021 4.6e-08 60.8 56 55.4
Lj7A614T43 Lonicera japonica HOM05D000792 ORTHO05D001021 4.6e-08 60.8 56 50.0
Sp2g15980 Schrenkiella parvula HOM05D000792 ORTHO05D001021 4.6e-08 60.8 47 63.8
CSS0007645 Camellia sinensis var. sinensis HOM05D000792 ORTHO05D001021 6.0e-08 60.5 56 53.6
Migut.F00026 Erythranthe guttata HOM05D000792 ORTHO05D001021 6.0e-08 60.5 56 53.6
Sabra16G0206900 Salix brachista HOM05D000792 ORTHO05D001021 6.0e-08 60.5 56 53.6
SalBow4G0645 Salvia bowleyana HOM05D000792 ORTHO05D001021 6.0e-08 60.5 56 53.6
SalBow4G2028 Salvia bowleyana HOM05D000792 ORTHO05D001021 6.0e-08 60.5 56 53.6
Sp2g15990 Schrenkiella parvula HOM05D000792 ORTHO05D001021 6.0e-08 60.5 45 64.4
AT3G26840 Arabidopsis thaliana HOM05D000792 ORTHO05D001021 7.9e-08 60.1 56 53.6
ClCG05G013970 Citrullus lanatus HOM05D000792 ORTHO05D001021 7.9e-08 60.1 56 51.8
Hma1.2p1_0525F.1_g172740 Hydrangea macrophylla HOM05D000792 ORTHO05D001021 7.9e-08 60.1 56 53.6
Potri.001G324400 Populus trichocarpa HOM05D000792 ORTHO05D001021 7.9e-08 60.1 56 53.6
RcHm_v2.0_Chr2g0176241 Rosa chinensis HOM05D000792 ORTHO05D001021 7.9e-08 60.1 56 50.0
Sopen02g039090 Solanum pennellii HOM05D000792 ORTHO05D001021 7.9e-08 60.1 56 51.8
AL5G15800 Arabidopsis lyrata HOM05D000792 ORTHO05D001021 1.0e-07 59.7 56 53.6
CSS0038400 Camellia sinensis var. sinensis HOM05D000792 ORTHO05D001021 1.0e-07 59.7 56 53.6
Carub.0005s0493 Capsella rubella HOM05D000792 ORTHO05D001021 1.0e-07 59.7 53 54.7
CARHR110430 Cardamine hirsuta HOM05D000792 ORTHO05D001021 1.0e-07 59.7 39 71.8
Haze_14919 Corylus avellana HOM05D000792 ORTHO05D001021 1.0e-07 59.7 56 50.0
QL02p070287 Quercus lobata HOM05D000792 ORTHO05D001021 1.0e-07 59.7 58 53.4
Sed0001760 Sechium edule HOM05D000792 ORTHO05D001021 1.0e-07 59.7 56 51.8
Actinidia05870 Actinidia chinensis HOM05D000792 ORTHO05D001021 1.3e-07 59.3 56 51.8
Aa31LG2G5720 Aethionema arabicum HOM05D000792 ORTHO05D001021 1.3e-07 59.3 45 62.2
arahy.Tifrunner.gnm1.ann1.GM0P2Y Arachis hypogaea HOM05D000792 ORTHO05D001021 1.3e-07 59.3 58 50.0
MELO3C014937.2 Cucumis melo HOM05D000792 ORTHO05D001021 1.3e-07 59.3 56 50.0
PSO478G3871 Papaver somniferum HOM05D000792 ORTHO05D001021 1.3e-07 59.3 56 55.4
Thecc.04G043300 Theobroma cacao HOM05D000792 ORTHO05D001021 1.3e-07 59.3 56 53.6
Cfa007185 Carpinus fangiana HOM05D000792 ORTHO05D001021 1.8e-07 58.9 55 49.1
COL.COLO4_13324 Corchorus olitorius HOM05D000792 ORTHO05D001021 1.8e-07 58.9 56 53.6
MD17G1009900 Malus domestica HOM05D000792 ORTHO05D001021 1.8e-07 58.9 57 54.4
Phvul.001G087700 Phaseolus vulgaris HOM05D000792 ORTHO05D001021 1.8e-07 58.9 56 50.0
Ciclev10014442m.g Citrus clementina HOM05D000792 ORTHO05D001021 2.3e-07 58.5 47 59.6
CsaV3_3G026480 Cucumis sativus L. HOM05D000792 ORTHO05D001021 2.3e-07 58.5 56 50.0
Gohir.D11G066600 Gossypium hirsutum HOM05D000792 ORTHO05D001021 2.3e-07 58.5 46 56.5
Gorai.007G072100 Gossypium raimondii HOM05D000792 ORTHO05D001021 2.3e-07 58.5 46 56.5
Medtr7g083200 Medicago truncatula HOM05D000792 ORTHO05D001021 2.3e-07 58.5 56 50.0
Nn4g22201 Nelumbo nucifera HOM05D000792 ORTHO05D001021 2.3e-07 58.5 57 52.6
Potri.001G324200 Populus trichocarpa HOM05D000792 ORTHO05D001021 2.3e-07 58.5 47 57.4
PGSC0003DMG400020199 Solanum tuberosum HOM05D000792 ORTHO05D001021 2.3e-07 58.5 56 51.8
Actinidia05869 Actinidia chinensis HOM05D000792 ORTHO05D001021 3.0e-07 58.2 56 50.0
Carub.0005s0494 Capsella rubella HOM05D000792 ORTHO05D001021 3.0e-07 58.2 56 50.0
Nitab4.5_0002172g0080 Nicotiana tabacum HOM05D000792 ORTHO05D001021 3.0e-07 58.2 56 50.0
Peaxi162Scf00420g00745 Petunia axillaris HOM05D000792 ORTHO05D001021 3.0e-07 58.2 56 51.8
Sabra16G0206800 Salix brachista HOM05D000792 ORTHO05D001021 3.0e-07 58.2 47 57.4
Hund12849 Selenicereus undatus HOM05D000792 ORTHO05D001021 3.0e-07 58.2 56 50.0
Thecc.04G043400 Theobroma cacao HOM05D000792 ORTHO05D001021 3.0e-07 58.2 46 56.5
CAN.G473.147 Capsicum annuum HOM05D000792 ORTHO05D001021 3.9e-07 57.8 56 46.4
Ciclev10015254m.g Citrus clementina HOM05D000792 ORTHO05D001021 3.9e-07 57.8 56 48.2
Thhalv10003736m.g Eutrema salsugineum HOM05D000792 ORTHO05D001021 3.9e-07 57.8 56 55.4
Lj1g0010996 Lotus japonicus HOM05D000792 ORTHO05D001021 3.9e-07 57.8 56 48.2
Manes.04G090600 Manihot esculenta HOM05D000792 ORTHO05D001021 3.9e-07 57.8 56 53.6
BcaC03g17396 Brassica carinata HOM05D000792 ORTHO05D001021 5.1e-07 57.4 47 59.6
A02p34820 Brassica napus HOM05D000792 ORTHO05D001021 5.1e-07 57.4 47 59.6
C02p53390 Brassica napus HOM05D000792 ORTHO05D001021 5.1e-07 57.4 47 59.6
BolC2t11415H Brassica oleracea HOM05D000792 ORTHO05D001021 5.1e-07 57.4 47 59.6
BraA02t08489Z Brassica rapa HOM05D000792 ORTHO05D001021 5.1e-07 57.4 47 59.6
Carub.0005s0491 Capsella rubella HOM05D000792 ORTHO05D001021 5.1e-07 57.4 51 54.9
Phvul.001G087800 Phaseolus vulgaris HOM05D000792 ORTHO05D001021 5.1e-07 57.4 55 50.9
Psat3g095800 Pisum sativum HOM05D000792 ORTHO05D001021 5.1e-07 57.4 56 46.4
Sed0017738 Sechium edule HOM05D000792 ORTHO05D001021 5.1e-07 57.4 56 51.8
VMungo1383G1756 Vigna mungo HOM05D000792 ORTHO05D001021 5.1e-07 57.4 56 48.2
Ciclev10017437m.g Citrus clementina HOM05D000792 ORTHO05D001021 6.7e-07 57.0 56 50.0
ECA232G4801 Erigeron canadensis HOM05D000792 ORTHO05D001021 6.7e-07 57.0 56 50.0
Gohir.A11G062900 Gossypium hirsutum HOM05D000792 ORTHO05D001021 6.7e-07 57.0 46 54.3
Gohir.A11G063000 Gossypium hirsutum HOM05D000792 ORTHO05D001021 6.7e-07 57.0 46 58.7
Nitab4.5_0000519g0200 Nicotiana tabacum HOM05D000792 ORTHO05D001021 6.7e-07 57.0 56 50.0
GSVIVG01033025001 Vitis vinifera HOM05D000792 ORTHO05D001021 6.7e-07 57.0 56 50.0
ATR0582G185 Amborella trichopoda HOM05D000792 ORTHO05D001021 8.7e-07 56.6 56 53.6
arahy.Tifrunner.gnm1.ann1.4V9373 Arachis hypogaea HOM05D000792 ORTHO05D001021 8.7e-07 56.6 56 48.2
arahy.Tifrunner.gnm1.ann1.8FU3KM Arachis hypogaea HOM05D000792 ORTHO05D001021 8.7e-07 56.6 56 48.2
BcaC06g31041 Brassica carinata HOM05D000792 ORTHO05D001021 8.7e-07 56.6 47 59.6
CSS0016163 Camellia sinensis var. sinensis HOM05D000792 ORTHO05D001021 8.7e-07 56.6 65 47.7
Duzib147G1053 Durio zibethinus HOM05D000792 ORTHO05D001021 8.7e-07 56.6 46 56.5
FAN02G3732 Fragaria x ananassa HOM05D000792 ORTHO05D001021 8.7e-07 56.6 47 53.2
FAN02G4305 Fragaria x ananassa HOM05D000792 ORTHO05D001021 8.7e-07 56.6 47 53.2
Glyma.19G099400 Glycine max HOM05D000792 ORTHO05D001021 8.7e-07 56.6 56 46.4
HanXRQChr15g0486751 Helianthus annuus HOM05D000792 ORTHO05D001021 8.7e-07 56.6 56 50.0
Potri.001G324000 Populus trichocarpa HOM05D000792 ORTHO05D001021 8.7e-07 56.6 53 52.8
BcaB07g30206 Brassica carinata HOM05D000792 ORTHO05D001021 1.1e-06 56.2 45 60.0
CSS0024788 Camellia sinensis var. sinensis HOM05D000792 ORTHO05D001021 1.1e-06 56.2 56 50.0
Carub.0005s0495 Capsella rubella HOM05D000792 ORTHO05D001021 1.1e-06 56.2 56 50.0
FvH4_6g54060 Fragaria vesca HOM05D000792 ORTHO05D001021 1.1e-06 56.2 47 53.2
FAN14G3240 Fragaria x ananassa HOM05D000792 ORTHO05D001021 1.1e-06 56.2 47 53.2
Lsat_1_v5_gn_4_185980 Lactuca sativa HOM05D000792 ORTHO05D001021 1.1e-06 56.2 53 47.2
Lj1g0021051 Lotus japonicus HOM05D000792 ORTHO05D001021 1.1e-06 56.2 57 47.4
Hund12848 Selenicereus undatus HOM05D000792 ORTHO05D001021 1.1e-06 56.2 56 48.2
Ah.03g148350 Amaranthus hybridus HOM05D000792 ORTHO05D001021 1.5e-06 55.8 56 55.4
BcaC06g33886 Brassica carinata HOM05D000792 ORTHO05D001021 1.5e-06 55.8 47 59.6
A06p41720 Brassica napus HOM05D000792 ORTHO05D001021 1.5e-06 55.8 47 59.6
C07p35900 Brassica napus HOM05D000792 ORTHO05D001021 1.5e-06 55.8 47 59.6
BolC7t44106H Brassica oleracea HOM05D000792 ORTHO05D001021 1.5e-06 55.8 47 59.6
BraA06t27092Z Brassica rapa HOM05D000792 ORTHO05D001021 1.5e-06 55.8 47 59.6
ECA232G1679 Erigeron canadensis HOM05D000792 ORTHO05D001021 1.5e-06 55.8 56 48.2
Glyma.16G051300 Glycine max HOM05D000792 ORTHO05D001021 1.5e-06 55.8 55 49.1
Oeu020407.1 Olea europaea HOM05D000792 ORTHO05D001021 1.5e-06 55.8 56 50.0
C02p53440 Brassica napus HOM05D000792 ORTHO05D001021 1.9e-06 55.5 48 52.1
Thhalv10003731m.g Eutrema salsugineum HOM05D000792 ORTHO05D001021 1.9e-06 55.5 45 60.0
MBI18_g12403_MAGBIO Magnolia biondii HOM05D000792 ORTHO05D001021 1.9e-06 55.5 56 46.4
Oeu038577.1 Olea europaea HOM05D000792 ORTHO05D001021 1.9e-06 55.5 56 51.8
Aa31LG5G11170 Aethionema arabicum HOM05D000792 ORTHO05D001021 2.5e-06 55.1 56 44.6
AUR62003382 Chenopodium quinoa HOM05D000792 ORTHO05D001021 2.5e-06 55.1 56 50.0
Glyma.16G051200 Glycine max HOM05D000792 ORTHO05D001021 2.5e-06 55.1 56 44.6
PGR142G4037 Punica granatum HOM05D000792 ORTHO05D001021 2.5e-06 55.1 57 54.4
Sed0005337 Sechium edule HOM05D000792 ORTHO05D001021 2.5e-06 55.1 56 48.2
SGA_v2.0_scaffold44G16940 Striga asiatica HOM05D000792 ORTHO05D001021 2.5e-06 55.1 56 50.0
A02p34830 Brassica napus HOM05D000792 ORTHO05D001021 3.3e-06 54.7 45 55.6
A02p34860 Brassica napus HOM05D000792 ORTHO05D001021 3.3e-06 54.7 48 50.0
C02p53400 Brassica napus HOM05D000792 ORTHO05D001021 3.3e-06 54.7 45 55.6
Aqoxy5G03216 Aquilegia oxysepala HOM05D000792 ORTHO05D001021 4.3e-06 54.3 56 51.8
EL10Ac6g15463 Beta vulgaris HOM05D000792 ORTHO05D001021 4.3e-06 54.3 45 57.8
BcaC03g17399 Brassica carinata HOM05D000792 ORTHO05D001021 4.3e-06 54.3 48 50.0
BolC2t11419H Brassica oleracea HOM05D000792 ORTHO05D001021 4.3e-06 54.3 48 50.0
Ciclev10014448m.g Citrus clementina HOM05D000792 ORTHO05D001021 4.3e-06 54.3 56 50.0
Cc02_g31120 Coffea canephora HOM05D000792 ORTHO05D001021 4.3e-06 54.3 56 44.6
Potri.017G062200 Populus trichocarpa HOM05D000792 ORTHO05D001021 4.3e-06 54.3 53 50.9
AUR62029446 Chenopodium quinoa HOM05D000792 ORTHO05D001021 5.6e-06 53.9 56 50.0
TPR.G35084 Trifolium pratense HOM05D000792 ORTHO05D001021 5.6e-06 53.9 56 42.9
CAN.G134.196 Capsicum annuum HOM05D000792 ORTHO05D001021 7.4e-06 53.5 56 44.6
BraA02t08490Z Brassica rapa HOM05D000792 ORTHO05D001021 9.6e-06 53.1 45 53.3
Cpa.g.sc70.97 Carica papaya HOM05D000792 ORTHO05D001021 9.6e-06 53.1 56 48.2
Lj1g0010516 Lotus japonicus HOM05D000792 ORTHO05D001021 9.6e-06 53.1 55 43.6
PSO017G3117 Papaver somniferum HOM05D000792 ORTHO05D001021 9.6e-06 53.1 55 47.3


User provided reference genes

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