Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g35711 Brassica carinata HOM05D008838 ORTHO05D039997 2.3e-182 642.1 330 100.0
A03p51090 Brassica napus HOM05D008838 ORTHO05D039997 4.3e-120 435.3 355 69.3
BcaB07g32738 Brassica carinata HOM05D008838 ORTHO05D092174 1.0e-68 264.6 361 47.6
C07p34790 Brassica napus HOM05D008838 ORTHO05D028150 5.5e-67 258.8 363 46.3
A07p31520 Brassica napus HOM05D008838 ORTHO05D028150 1.5e-59 234.2 360 45.0
A10p17400 Brassica napus HOM05D008838 ORTHO05D028150 1.6e-58 230.7 360 44.7
C05p36670 Brassica napus HOM05D008838 ORTHO05D017578 7.0e-38 162.2 153 56.9
BcaC08g44443 Brassica carinata HOM05D008838 ORTHO05D017578 7.8e-37 158.7 230 46.5
C06p18890 Brassica napus HOM05D008838 ORTHO05D017578 7.8e-37 158.7 230 46.5
C05p48960 Brassica napus HOM05D008838 ORTHO05D017578 2.3e-36 157.1 154 54.5
C07p11780 Brassica napus HOM05D005627 ORTHO05D098341 4.0e-33 146.4 71 100.0
BcaB01g01348 Brassica carinata HOM05D008838 ORTHO05D021876 6.4e-31 139.0 149 51.0
BolC7t44007H Brassica oleracea HOM05D005627 ORTHO05D028150 4.1e-30 136.3 95 68.4
BcaB06g27480 Brassica carinata HOM05D008838 ORTHO05D021876 2.0e-29 134.0 266 37.6
BolC9t58939H Brassica oleracea HOM05D008838 ORTHO05D011792 4.6e-29 132.9 121 55.4
BolC8t49548H Brassica oleracea HOM05D008838 ORTHO05D011792 7.8e-29 132.1 185 43.2
BcaC06g36744 Brassica carinata HOM05D008838 ORTHO05D011792 1.1e-27 128.3 352 34.1
BcaC09g48466 Brassica carinata HOM05D008838 ORTHO05D011792 1.5e-27 127.9 114 56.1
BolC4t26246H Brassica oleracea HOM05D008838 ORTHO05D017574 4.0e-25 119.8 161 42.9
A05p23620 Brassica napus HOM05D008838 ORTHO05D017574 2.0e-24 117.5 159 42.1
BraA05t21230Z Brassica rapa HOM05D008838 ORTHO05D017574 2.0e-24 117.5 159 42.1
BcaB02g06726 Brassica carinata HOM05D009418 ORTHO05D094631 3.7e-23 113.2 154 40.9
BolC6t36759H Brassica oleracea HOM05D008838 ORTHO05D017574 3.7e-23 113.2 173 37.6
BcaC08g44170 Brassica carinata HOM05D009418 ORTHO05D017574 4.9e-23 112.8 356 28.7
BcaB03g15637 Brassica carinata HOM05D009418 ORTHO05D027366 1.4e-22 111.3 342 31.9
BolC5t33635H Brassica oleracea HOM05D008838 ORTHO05D017578 1.4e-22 111.3 119 52.9
C07p13430 Brassica napus HOM05D008838 ORTHO05D027188 2.4e-22 110.5 125 47.2
BolC7t41838H Brassica oleracea HOM05D008838 ORTHO05D027188 2.4e-22 110.5 125 47.2
BcaC08g44143 Brassica carinata HOM05D008838 ORTHO05D011792 5.4e-22 109.4 168 42.9
BolC6t37094H Brassica oleracea HOM05D008838 ORTHO05D017578 7.1e-22 109.0 195 43.6
BraA08t34215Z Brassica rapa HOM05D008838 ORTHO05D017578 9.2e-22 108.6 199 41.2
BraA05t19813Z Brassica rapa HOM05D008838 ORTHO05D027188 6.0e-21 105.9 128 44.5
BcaB04g17340 Brassica carinata HOM05D009418 ORTHO05D009842 5.1e-20 102.8 154 40.3
C04p58410 Brassica napus HOM05D009418 ORTHO05D017574 2.5e-19 100.5 335 29.6
A03p31870 Brassica napus HOM05D005627 ORTHO05D027884 4.3e-19 99.8 75 70.7
BraSC37t46125Z Brassica rapa HOM05D009418 ORTHO05D018626 9.5e-19 98.6 160 35.0
BcaB01g01600 Brassica carinata HOM05D009418 ORTHO05D092871 1.2e-18 98.2 153 38.6
BcaC01g03623 Brassica carinata HOM05D009418 ORTHO05D018626 1.6e-18 97.8 160 35.6
A10p08780 Brassica napus HOM05D009418 ORTHO05D018626 2.8e-18 97.1 160 34.4
BcaB05g22096 Brassica carinata HOM05D009418 ORTHO05D011792 8.1e-18 95.5 257 31.1
BcaB01g04195 Brassica carinata HOM05D009418 ORTHO05D018626 1.4e-17 94.7 253 30.4
BolC4t27750H Brassica oleracea HOM05D009418 ORTHO05D018626 5.2e-17 92.8 160 33.8
BcaC06g35569 Brassica carinata HOM05D008838 ORTHO05D027188 2.0e-16 90.9 112 45.5
BcaB07g33121 Brassica carinata HOM05D009418 ORTHO05D027366 2.2e-15 87.4 84 48.8
BraA06t24543Z Brassica rapa HOM05D005627 ORTHO05D027884 2.9e-15 87.0 45 91.1
BcaC02g07853 Brassica carinata HOM05D009418 ORTHO05D002311 8.4e-15 85.5 355 26.5
BcaC08g46851 Brassica carinata HOM05D009418 ORTHO05D090315 8.4e-15 85.5 361 29.4
A03p26800 Brassica napus HOM05D016807 ORTHO05D021876 3.2e-14 83.6 303 30.4
A04p22210 Brassica napus HOM05D016807 ORTHO05D021876 3.2e-14 83.6 303 30.4
BraA04t18196Z Brassica rapa HOM05D005627 ORTHO05D027884 3.2e-14 83.6 43 93.0
BcaC05g24337 Brassica carinata HOM05D009418 ORTHO05D011792 7.1e-14 82.4 174 29.9
BraA07t29803Z Brassica rapa HOM05D008838 ORTHO05D024146 9.2e-14 82.0 73 56.2
BcaB05g23461 Brassica carinata HOM05D009418 ORTHO05D011792 2.7e-13 80.5 336 27.4
BolC8t49910H Brassica oleracea HOM05D009418 ORTHO05D018626 4.6e-13 79.7 365 27.1
C04p12610 Brassica napus HOM05D005627 ORTHO05D011792 1.3e-12 78.2 114 37.7
BcaC02g11662 Brassica carinata HOM05D005627 ORTHO05D011792 1.7e-12 77.8 114 37.7
BolC4t22910H Brassica oleracea HOM05D005627 ORTHO05D011792 1.7e-12 77.8 114 37.7
C08p22740 Brassica napus HOM05D009418 ORTHO05D018626 2.3e-12 77.4 365 26.8
BraA09t41982Z Brassica rapa HOM05D005627 ORTHO05D011792 2.3e-12 77.4 140 35.0
BolC7t41167H Brassica oleracea HOM05D005627 ORTHO05D011792 5.1e-12 76.3 114 36.8
BolC7t41649H Brassica oleracea HOM05D005627 ORTHO05D027884 1.1e-11 75.1 40 92.5
BcaC06g36127 Brassica carinata HOM05D013280 ORTHO05D011792 2.5e-11 73.9 258 28.7
A03p68050 Brassica napus HOM05D009418 ORTHO05D027366 4.3e-11 73.2 110 35.5
C07p07500 Brassica napus HOM05D013280 ORTHO05D011792 4.3e-11 73.2 264 28.4
BraA01t02667Z Brassica rapa HOM05D009418 ORTHO05D027366 4.3e-11 73.2 110 35.5
BraA03t11891Z Brassica rapa HOM05D016807 ORTHO05D021876 1.6e-10 71.2 293 29.4
BcaB08g36732 Brassica carinata HOM05D009418 ORTHO05D011792 4.7e-10 69.7 110 38.2
BcaC05g27915 Brassica carinata HOM05D005627 ORTHO05D011792 4.0e-09 66.6 253 28.1
BcaC05g27687 Brassica carinata HOM05D005627 ORTHO05D021837 6.8e-09 65.9 46 65.2
BraA02t06823Z Brassica rapa HOM05D005627 ORTHO05D011792 2.0e-08 64.3 114 36.0
C06p00920 Brassica napus HOM05D008838 ORTHO05D024146 2.6e-08 63.9 65 50.8
BcaC05g27914 Brassica carinata HOM05D005627 ORTHO05D011792 5.8e-08 62.8 232 28.0
BolC9t56622H Brassica oleracea HOM05D013280 ORTHO05D011792 5.8e-08 62.8 126 31.7
BcaB01g01826 Brassica carinata HOM05D009418 ORTHO05D092826 1.7e-07 61.2 233 29.2
BolC4t27364H Brassica oleracea HOM05D009418 ORTHO05D017574 1.7e-07 61.2 101 37.6
BcaB05g23099 Brassica carinata HOM05D008838 ORTHO05D017574 3.8e-07 60.1 143 31.5
BcaC01g03482 Brassica carinata HOM05D006289 ORTHO05D032299 3.8e-07 60.1 112 35.7
BcaB01g00118 Brassica carinata HOM05D005627 ORTHO05D009842 6.4e-07 59.3 83 37.3
BcaB05g23054 Brassica carinata HOM05D005627 ORTHO05D011792 6.4e-07 59.3 255 26.7
BolC6t35227H Brassica oleracea HOM05D016807 ORTHO05D024146 8.4e-07 58.9 60 50.0
A05p27900 Brassica napus HOM05D006289 ORTHO05D009842 1.9e-06 57.8 96 33.3
A07p02750 Brassica napus HOM05D006289 ORTHO05D009842 2.4e-06 57.4 132 28.8
BraA05t20012Z Brassica rapa HOM05D005627 ORTHO05D021730 2.4e-06 57.4 80 37.5
A02p27270 Brassica napus HOM05D006289 ORTHO05D040814 3.2e-06 57.0 112 29.5
BraA02t07752Z Brassica rapa HOM05D006289 ORTHO05D040814 3.2e-06 57.0 112 29.5
BcaB04g18139 Brassica carinata HOM05D006289 ORTHO05D009842 4.2e-06 56.6 168 25.0
BraA01t02126Z Brassica rapa HOM05D005627 ORTHO05D021730 4.2e-06 56.6 80 37.5
BolC9t59378H Brassica oleracea HOM05D006289 ORTHO05D017568 5.4e-06 56.2 76 43.4
BcaC04g20743 Brassica carinata HOM05D006289 ORTHO05D027118 9.3e-06 55.5 83 36.1
BcaC05g27033 Brassica carinata HOM05D005627 ORTHO05D031886 9.3e-06 55.5 83 33.7
C05p28910 Brassica napus HOM05D005627 ORTHO05D031886 9.3e-06 55.5 128 29.7
BolC5t31612H Brassica oleracea HOM05D005627 ORTHO05D031886 9.3e-06 55.5 128 29.7


User provided reference genes

Program Settings