Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g35536 Brassica carinata HOM05D004375 ORTHO05D008558 0.0e+00 2188.3 1101 100.0
C07p19300 Brassica napus HOM05D004375 ORTHO05D008558 0.0e+00 1540.4 1065 78.6
C02p27860 Brassica napus HOM05D004375 ORTHO05D008558 0.0e+00 1530.8 1065 78.4
BolC2t08831H Brassica oleracea HOM05D004375 ORTHO05D008558 0.0e+00 1507.3 1053 78.0
BcaC03g15201 Brassica carinata HOM05D004375 ORTHO05D008558 0.0e+00 1421.8 1085 73.1
BcaC03g15251 Brassica carinata HOM05D004375 ORTHO05D008558 0.0e+00 1421.8 1068 74.2
C01p25790 Brassica napus HOM05D004375 ORTHO05D008558 0.0e+00 1296.6 924 77.1
C02p28420 Brassica napus HOM05D004375 ORTHO05D008558 0.0e+00 1260.4 735 89.1
BcaB07g33031 Brassica carinata HOM05D004375 ORTHO05D008558 0.0e+00 1254.2 1079 65.2
BcaB05g23703 Brassica carinata HOM05D004375 ORTHO05D008558 0.0e+00 1246.9 1056 67.2
BraA09t39239Z Brassica rapa HOM05D004375 ORTHO05D008558 0.0e+00 1212.2 1033 66.8
BolC3t21361H Brassica oleracea HOM05D004375 ORTHO05D008558 0.0e+00 1209.5 910 74.1
BcaB01g03503 Brassica carinata HOM05D004375 ORTHO05D008558 0.0e+00 1200.3 1047 65.0
BcaC01g06196 Brassica carinata HOM05D004375 ORTHO05D008558 0.0e+00 1200.3 897 75.0
BcaB01g04420 Brassica carinata HOM05D004375 ORTHO05D008558 0.0e+00 1184.9 1066 64.0
BcaB03g15947 Brassica carinata HOM05D004375 ORTHO05D008558 0.0e+00 1152.1 1019 65.1
BcaB05g23011 Brassica carinata HOM05D004375 ORTHO05D008558 0.0e+00 1081.2 1085 59.8
BolC7t41868H Brassica oleracea HOM05D004375 ORTHO05D008558 9.8e-294 1013.8 536 96.3
BcaB02g10812 Brassica carinata HOM05D004375 ORTHO05D008558 1.6e-291 1006.5 757 72.5
A09p17280 Brassica napus HOM05D004375 ORTHO05D008558 3.3e-281 972.2 648 79.0
BcaC03g14687 Brassica carinata HOM05D004375 ORTHO05D008558 7.3e-281 971.1 886 65.7
A01p20690 Brassica napus HOM05D004375 ORTHO05D008558 1.8e-279 966.5 636 79.6
A02p26110 Brassica napus HOM05D004375 ORTHO05D008558 1.7e-274 949.9 644 77.2
BolC2t08886H Brassica oleracea HOM05D004375 ORTHO05D008558 9.9e-262 907.5 629 78.9
A03p68120 Brassica napus HOM05D004375 ORTHO05D008558 1.1e-255 887.5 563 81.3
BraA07t28625Z Brassica rapa HOM05D004375 ORTHO05D008558 1.5e-254 883.6 702 69.1
A09p37300 Brassica napus HOM05D004375 ORTHO05D008558 5.1e-250 868.6 560 81.1
BcaB04g17136 Brassica carinata HOM05D004375 ORTHO05D008558 7.1e-236 821.6 733 63.6
BcaB03g16500 Brassica carinata HOM05D004375 ORTHO05D008558 9.3e-236 821.2 823 60.6
C01p14310 Brassica napus HOM05D004375 ORTHO05D008558 5.8e-230 802.0 458 90.2
A02p20030 Brassica napus HOM05D004375 ORTHO05D008558 1.9e-220 770.4 510 78.4
C01p14320 Brassica napus HOM05D004375 ORTHO05D008558 4.2e-212 742.7 593 70.7
BcaB07g32958 Brassica carinata HOM05D004375 ORTHO05D008558 2.8e-184 650.2 656 58.5
A09p37230 Brassica napus HOM05D004375 ORTHO05D008558 4.8e-184 649.4 501 71.1
BolC1t02527H Brassica oleracea HOM05D004375 ORTHO05D008558 1.9e-172 610.9 502 68.7
BcaC03g15253 Brassica carinata HOM05D004375 ORTHO05D008558 1.0e-170 605.1 486 71.2
BcaB02g10241 Brassica carinata HOM05D004375 ORTHO05D008558 3.4e-169 600.1 1103 39.3
BcaC04g23067 Brassica carinata HOM05D004375 ORTHO05D008558 2.6e-161 573.9 1100 38.7
BraA09t39238Z Brassica rapa HOM05D004375 ORTHO05D008558 2.7e-158 563.9 471 67.7
BolC9t56012H Brassica oleracea HOM05D004375 ORTHO05D008558 1.9e-156 557.8 1085 37.7
BcaC09g51321 Brassica carinata HOM05D004375 ORTHO05D008558 8.0e-155 552.4 301 94.0
BcaC03g15252 Brassica carinata HOM05D004375 ORTHO05D008558 2.0e-145 521.2 510 62.2
BcaB06g26290 Brassica carinata HOM05D004375 ORTHO05D008558 7.6e-137 492.7 1068 34.6
BcaB05g23325 Brassica carinata HOM05D004375 ORTHO05D008558 4.4e-129 466.8 791 41.2
A10p33200 Brassica napus HOM05D004375 ORTHO05D008558 3.5e-126 457.2 304 79.6
BcaB07g32718 Brassica carinata HOM05D004375 ORTHO05D008558 4.2e-119 433.7 738 38.9
A07p43390 Brassica napus HOM05D004375 ORTHO05D008558 1.2e-118 432.2 1094 32.6
BraA02t07607Z Brassica rapa HOM05D004375 ORTHO05D008558 1.6e-115 421.8 319 71.5
BcaB08g35442 Brassica carinata HOM05D004375 ORTHO05D008558 6.4e-112 409.8 1116 31.5
BcaB02g06988 Brassica carinata HOM05D004375 ORTHO05D008558 5.5e-111 406.8 364 63.2
BolC9t56614H Brassica oleracea HOM05D004375 ORTHO05D031763 9.3e-111 406.0 941 35.5
A05p27930 Brassica napus HOM05D004375 ORTHO05D008558 6.0e-110 403.3 246 82.1
C02p27470 Brassica napus HOM05D004375 ORTHO05D008558 5.1e-109 400.2 784 37.4
BcaC04g21457 Brassica carinata HOM05D004375 ORTHO05D008558 2.6e-105 387.9 776 37.2
BcaB05g21909 Brassica carinata HOM05D004375 ORTHO05D008558 4.8e-99 367.1 959 33.2
A09p24250 Brassica napus HOM05D004375 ORTHO05D008558 2.2e-96 358.2 226 81.9
A10p33190 Brassica napus HOM05D004375 ORTHO05D008558 1.0e-93 349.4 383 55.4
BcaC03g15172 Brassica carinata HOM05D004375 ORTHO05D008558 2.0e-92 345.1 638 38.9
C06p12490 Brassica napus HOM05D004375 ORTHO05D008558 2.4e-90 338.2 715 36.4
C09p31560 Brassica napus HOM05D004375 ORTHO05D008558 5.3e-90 337.0 729 35.1
BolC2t08885H Brassica oleracea HOM05D004375 ORTHO05D008558 1.4e-85 322.4 386 54.4
A05p27920 Brassica napus HOM05D004375 ORTHO05D008558 6.5e-80 303.5 235 71.1
BcaB05g24368 Brassica carinata HOM05D004375 ORTHO05D008558 1.7e-75 288.9 641 37.3
BcaB07g32629 Brassica carinata HOM05D004375 ORTHO05D008558 1.4e-74 285.8 704 33.0
BcaB05g23866 Brassica carinata HOM05D004375 ORTHO05D008558 2.6e-73 281.6 677 34.9
BcaB06g26129 Brassica carinata HOM05D004375 ORTHO05D016039 9.4e-71 273.1 524 37.0
BcaC08g43054 Brassica carinata HOM05D004375 ORTHO05D016039 1.1e-66 259.6 431 40.1
BcaC02g09621 Brassica carinata HOM05D004375 ORTHO05D008558 1.8e-66 258.8 691 33.6
A10p10580 Brassica napus HOM05D004375 ORTHO05D008558 3.1e-66 258.1 746 30.3
BcaC02g10128 Brassica carinata HOM05D004375 ORTHO05D008558 9.1e-66 256.5 736 32.1
BcaB05g23867 Brassica carinata HOM05D004375 ORTHO05D008558 6.5e-64 250.4 370 42.7
BraA01t02655Z Brassica rapa HOM05D004375 ORTHO05D008558 9.4e-63 246.5 177 74.6
BcaB01g03337 Brassica carinata HOM05D004375 ORTHO05D016039 3.6e-62 244.6 510 35.5
BcaB05g22558 Brassica carinata HOM05D004375 ORTHO05D008558 6.8e-61 240.4 667 30.6
C09p37810 Brassica napus HOM05D004375 ORTHO05D031763 5.7e-60 237.3 431 39.4
BcaC09g49739 Brassica carinata HOM05D004375 ORTHO05D008558 1.3e-59 236.1 352 41.8
BcaB05g21622 Brassica carinata HOM05D004375 ORTHO05D008558 2.3e-56 225.3 267 44.2
C03p10830 Brassica napus HOM05D004375 ORTHO05D008558 3.8e-56 224.6 1079 26.4
BcaB05g23104 Brassica carinata HOM05D004375 ORTHO05D008558 8.6e-56 223.4 757 29.6
BcaC04g20927 Brassica carinata HOM05D004375 ORTHO05D031763 1.1e-55 223.0 696 30.0
BcaB06g28882 Brassica carinata HOM05D004375 ORTHO05D008558 7.2e-55 220.3 352 38.6
C01p28010 Brassica napus HOM05D004375 ORTHO05D008558 2.8e-54 218.4 297 40.1
C06p03140 Brassica napus HOM05D004375 ORTHO05D016039 1.4e-53 216.1 347 41.8
BolC6t35432H Brassica oleracea HOM05D004375 ORTHO05D016039 1.4e-53 216.1 347 41.8
BraA05t20802Z Brassica rapa HOM05D004375 ORTHO05D008558 3.4e-52 211.5 378 40.7
A03p67640 Brassica napus HOM05D004375 ORTHO05D008558 7.5e-52 210.3 609 31.7
C01p25780 Brassica napus HOM05D004375 ORTHO05D008558 1.7e-51 209.1 126 87.3
BcaB02g09193 Brassica carinata HOM05D004375 ORTHO05D008558 3.9e-48 198.0 378 35.7
BraA06t26008Z Brassica rapa HOM05D004375 ORTHO05D008558 8.6e-48 196.8 321 36.1
BcaB01g03719 Brassica carinata HOM05D004375 ORTHO05D008558 2.8e-46 191.8 746 29.4
BolC1t03873H Brassica oleracea HOM05D004375 ORTHO05D008558 4.9e-43 181.0 200 47.0
C09p31570 Brassica napus HOM05D004375 ORTHO05D008558 9.2e-42 176.8 234 46.2
BolC1t02944H Brassica oleracea HOM05D004375 ORTHO05D016090 1.0e-40 173.3 1051 26.2
A05p24130 Brassica napus HOM05D004375 ORTHO05D008558 1.3e-40 172.9 710 27.9
BcaB05g23103 Brassica carinata HOM05D004375 ORTHO05D008558 9.5e-39 166.8 249 40.6
C01p39240 Brassica napus HOM05D004375 ORTHO05D008558 8.3e-35 153.7 133 52.6
BcaC02g10129 Brassica carinata HOM05D004375 ORTHO05D008558 7.1e-34 150.6 238 41.6
BcaB01g03413 Brassica carinata HOM05D004375 ORTHO05D000395 2.5e-31 142.1 243 39.9
BcaC09g50012 Brassica carinata HOM05D004375 ORTHO05D016090 1.2e-30 139.8 917 25.4
BcaC09g51320 Brassica carinata HOM05D004375 ORTHO05D008558 4.9e-27 127.9 107 69.2
BcaB05g24369 Brassica carinata HOM05D004375 ORTHO05D000395 1.9e-26 125.9 158 47.5
BcaC03g14060 Brassica carinata HOM05D004375 ORTHO05D024058 7.8e-25 120.6 408 29.9
BcaC03g14982 Brassica carinata HOM05D004375 ORTHO05D008558 1.5e-23 116.3 172 41.3
BcaB05g22559 Brassica carinata HOM05D004375 ORTHO05D008558 1.6e-22 112.8 173 38.7
A10p10570 Brassica napus HOM05D004375 ORTHO05D016039 3.6e-22 111.7 96 65.6
A05p24120 Brassica napus HOM05D004375 ORTHO05D016039 1.4e-21 109.8 96 63.5
BolC2t07404H Brassica oleracea HOM05D020498 ORTHO05D027565 1.2e-20 106.7 849 24.3
BcaC04g20539 Brassica carinata HOM05D030300 ORTHO05D032481 2.0e-20 105.9 597 27.3
Carub.0003s2748 Capsella rubella HOM05D004375 ORTHO05D008558 6.4e-19 100.9 273 31.9
BcaC06g35535 Brassica carinata HOM05D051504 ORTHO05D039118 8.4e-19 100.5 66 81.8
Thhalv10022419m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 1.1e-18 100.1 286 28.7
BolC1t02734H Brassica oleracea HOM05D004375 ORTHO05D008558 1.4e-18 99.8 118 41.5
Thhalv10015691m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 1.9e-18 99.4 214 33.6
Thhalv10029276m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 3.2e-18 98.6 423 26.0
Thhalv10023977m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 5.4e-18 97.8 214 33.2
BolC3t21360H Brassica oleracea HOM05D004375 ORTHO05D008558 9.3e-18 97.1 66 75.8
C02p50680 Brassica napus HOM05D004375 ORTHO05D008558 1.6e-17 96.3 96 49.0
Thhalv10000713m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 2.1e-17 95.9 356 26.1
Thhalv10002299m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 6.0e-17 94.4 214 32.2
Thhalv10015533m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 1.7e-16 92.8 447 25.5
Thhalv10003015m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 3.9e-16 91.7 210 30.0
BcaNung00426 Brassica carinata HOM05D004375 ORTHO05D095113 1.5e-15 89.7 181 30.9
BraA03t15607Z Brassica rapa HOM05D004375 ORTHO05D008558 1.6e-14 86.3 118 36.4
BcaB07g32586 Brassica carinata HOM05D004375 ORTHO05D016090 2.1e-14 85.9 341 23.5
BcaB04g17713 Brassica carinata HOM05D004375 ORTHO05D008558 4.8e-14 84.7 218 28.9
BraA01t02895Z Brassica rapa HOM05D029054 ORTHO05D024058 1.8e-13 82.8 87 55.2
C07p35600 Brassica napus HOM05D004375 ORTHO05D016039 2.4e-13 82.4 154 33.1
BolC7t44083H Brassica oleracea HOM05D004375 ORTHO05D016039 2.4e-13 82.4 154 33.1
BcaC01g06041 Brassica carinata HOM05D004375 ORTHO05D008558 9.0e-13 80.5 92 46.7
C09p42380 Brassica napus HOM05D004375 ORTHO05D027565 9.0e-13 80.5 145 38.6
BolC9t57118H Brassica oleracea HOM05D004375 ORTHO05D027565 9.0e-13 80.5 145 38.6
C01p30040 Brassica napus HOM05D004375 ORTHO05D016090 2.0e-12 79.3 772 23.3
C09p52110 Brassica napus HOM05D004375 ORTHO05D027250 9.9e-12 77.0 102 41.2
BolC2t11150H Brassica oleracea HOM05D004375 ORTHO05D106812 1.7e-11 76.3 97 42.3
C09p70730 Brassica napus HOM05D004375 ORTHO05D008558 2.2e-11 75.9 103 39.8
Sp4g06040 Schrenkiella parvula HOM05D004375 ORTHO05D008558 6.4e-11 74.3 180 32.8
BraA06t26009Z Brassica rapa HOM05D004375 ORTHO05D016039 7.1e-10 70.9 95 45.3
CARHR034790 Cardamine hirsuta HOM05D001038 ORTHO05D000395 1.6e-09 69.7 177 27.7
A04p02330 Brassica napus HOM05D004375 ORTHO05D008558 2.1e-09 69.3 93 41.9
BolC4t24807H Brassica oleracea HOM05D004375 ORTHO05D008558 2.7e-09 68.9 64 59.4
AL3G41200 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 3.5e-09 68.6 185 28.6
AL5G24460 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 4.6e-09 68.2 176 29.0
AL8G20830 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 4.6e-09 68.2 176 27.8
BolC4t26057H Brassica oleracea HOM05D004375 ORTHO05D008558 7.9e-09 67.4 236 31.8
BolC9t54141H Brassica oleracea HOM05D004375 ORTHO05D008558 1.0e-08 67.0 64 56.2
SpUn1480_0010 Schrenkiella parvula HOM05D004375 ORTHO05D008558 1.0e-08 67.0 86 33.7
BcaB07g32109 Brassica carinata HOM05D004375 ORTHO05D008558 1.7e-08 66.2 64 53.1
BcaB05g24722 Brassica carinata HOM05D004375 ORTHO05D091882 2.3e-08 65.9 531 24.7
C02p50670 Brassica napus HOM05D004375 ORTHO05D098514 3.9e-08 65.1 59 55.9
BcaB01g02236 Brassica carinata HOM05D004375 ORTHO05D008558 1.5e-07 63.2 95 37.9
BcaC05g25823 Brassica carinata HOM05D001038 ORTHO05D014932 1.5e-07 63.2 285 25.3
BcaB02g10843 Brassica carinata HOM05D001038 ORTHO05D000395 1.9e-07 62.8 209 24.4
BcaB06g27965 Brassica carinata HOM05D001038 ORTHO05D000395 2.5e-07 62.4 176 28.4
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 2.5e-07 62.4 196 27.6
AL6G49460 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 3.3e-07 62.0 175 29.7
BolC4t27362H Brassica oleracea HOM05D001038 ORTHO05D000395 3.3e-07 62.0 214 26.2
Thhalv10002975m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 5.6e-07 61.2 178 26.4
AL3G41000 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 7.3e-07 60.8 175 29.1
BolC7t41881H Brassica oleracea HOM05D001038 ORTHO05D000395 7.3e-07 60.8 308 21.1
BcaB04g17766 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-06 60.1 185 27.6
BolC2t11145H Brassica oleracea HOM05D001038 ORTHO05D043146 1.3e-06 60.1 157 29.3
A05p23600 Brassica napus HOM05D001038 ORTHO05D018589 1.6e-06 59.7 188 26.1
BraA05t21228Z Brassica rapa HOM05D001038 ORTHO05D018589 1.6e-06 59.7 188 26.1
BcaC01g04980 Brassica carinata HOM05D001038 ORTHO05D000395 2.8e-06 58.9 229 25.3
BolC2t11347H Brassica oleracea HOM05D001038 ORTHO05D000395 2.8e-06 58.9 162 29.6
BcaNung01879 Brassica carinata HOM05D004375 ORTHO05D016039 3.6e-06 58.5 87 35.6
A01p24490 Brassica napus HOM05D001038 ORTHO05D021947 3.6e-06 58.5 206 25.7
C08p22730 Brassica napus HOM05D001038 ORTHO05D016776 3.6e-06 58.5 272 22.8
BraSC37t46126Z Brassica rapa HOM05D001038 ORTHO05D016776 3.6e-06 58.5 281 22.4
BcaB07g29670 Brassica carinata HOM05D004375 ORTHO05D091945 4.8e-06 58.2 122 30.3
BcaC07g37762 Brassica carinata HOM05D001038 ORTHO05D000395 4.8e-06 58.2 159 28.3
A02p27290 Brassica napus HOM05D001038 ORTHO05D000395 4.8e-06 58.2 176 29.0
BolC8t48147H Brassica oleracea HOM05D001038 ORTHO05D000395 4.8e-06 58.2 159 28.3
BraA02t07755Z Brassica rapa HOM05D001038 ORTHO05D000395 4.8e-06 58.2 176 29.0
BcaB08g34623 Brassica carinata HOM05D001038 ORTHO05D000395 8.1e-06 57.4 175 25.7
BcaC08g46850 Brassica carinata HOM05D001038 ORTHO05D000395 8.1e-06 57.4 190 24.2


User provided reference genes

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