Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g35524 Brassica carinata HOM05D001498 ORTHO05D016694 2.6e-99 365.9 263 100.0
BcaC02g11068 Brassica carinata HOM05D001498 ORTHO05D016694 4.5e-80 302.0 263 87.1
BolC4t23616H Brassica oleracea HOM05D001498 ORTHO05D016694 1.0e-79 300.8 263 87.8
C04p20860 Brassica napus HOM05D001498 ORTHO05D016694 5.0e-79 298.5 263 87.5
C07p13940 Brassica napus HOM05D001379 ORTHO05D001277 8.8e-76 287.7 234 93.2
BolC9t57107H Brassica oleracea HOM05D001498 ORTHO05D016694 1.2e-75 287.3 263 85.9
C09p42290 Brassica napus HOM05D001498 ORTHO05D016694 3.4e-75 285.8 263 85.6
BcaC06g36329 Brassica carinata HOM05D001498 ORTHO05D096194 2.7e-72 276.2 263 78.7
BcaC04g20545 Brassica carinata HOM05D001498 ORTHO05D016694 4.3e-62 242.3 254 65.7
BolC1t03834H Brassica oleracea HOM05D001379 ORTHO05D001277 1.2e-61 240.7 234 80.8
C01p38770 Brassica napus HOM05D001379 ORTHO05D001277 3.6e-61 239.2 234 80.3
BcaC05g27663 Brassica carinata HOM05D001498 ORTHO05D090842 4.9e-58 228.8 180 76.7
BcaB02g10765 Brassica carinata HOM05D001498 ORTHO05D095468 6.6e-55 218.4 246 63.0
BcaC04g20544 Brassica carinata HOM05D001498 ORTHO05D016694 5.8e-51 205.3 254 60.6
BolC7t40930H Brassica oleracea HOM05D001379 ORTHO05D016694 1.5e-46 190.7 130 80.8
BcaC06g35064 Brassica carinata HOM05D001498 ORTHO05D016694 1.9e-46 190.3 119 95.0
BolC5t31266H Brassica oleracea HOM05D001498 ORTHO05D019959 7.3e-30 135.2 176 48.3
C02p39460 Brassica napus HOM05D008414 ORTHO05D014108 3.5e-24 116.3 287 50.2
BcaC02g11926 Brassica carinata HOM05D001498 ORTHO05D019959 1.3e-23 114.4 103 59.2
BcaB02g11218 Brassica carinata HOM05D001224 ORTHO05D010571 2.3e-23 113.6 172 51.2
C07p06210 Brassica napus HOM05D001498 ORTHO05D032253 2.3e-23 113.6 165 55.2
BcaC06g36230 Brassica carinata HOM05D001498 ORTHO05D032253 5.6e-22 109.0 161 54.7
BolC7t41038H Brassica oleracea HOM05D001498 ORTHO05D032253 5.6e-22 109.0 164 53.7
BcaB01g01185 Brassica carinata HOM05D001498 ORTHO05D019959 3.4e-19 99.8 99 55.6
BolC2t09959H Brassica oleracea HOM05D008414 ORTHO05D033195 9.9e-19 98.2 263 51.0
C05p25290 Brassica napus HOM05D001498 ORTHO05D019959 2.2e-18 97.1 86 61.6
BcaB04g17776 Brassica carinata HOM05D001498 ORTHO05D092868 1.9e-17 94.0 152 42.1
BcaB04g17678 Brassica carinata HOM05D001498 ORTHO05D094760 2.1e-16 90.5 107 47.7
BcaB04g17785 Brassica carinata HOM05D003591 ORTHO05D094524 4.6e-16 89.4 96 61.5
BcaB05g23077 Brassica carinata HOM05D001498 ORTHO05D091436 4.6e-16 89.4 89 52.8
BcaB06g27205 Brassica carinata HOM05D001498 ORTHO05D091204 7.9e-16 88.6 90 54.4
BcaB07g32989 Brassica carinata HOM05D001498 ORTHO05D008559 1.8e-15 87.4 144 40.3
BcaB07g33315 Brassica carinata HOM05D001498 ORTHO05D091495 2.3e-15 87.0 107 45.8
BcaB01g01484 Brassica carinata HOM05D001498 ORTHO05D091615 3.9e-15 86.3 147 40.1
BcaB01g03187 Brassica carinata HOM05D001498 ORTHO05D090608 3.9e-15 86.3 107 46.7
BcaB05g22880 Brassica carinata HOM05D001498 ORTHO05D019959 5.1e-15 85.9 98 54.1
BcaB08g35016 Brassica carinata HOM05D001498 ORTHO05D092631 3.3e-14 83.2 107 43.0
BcaB07g33084 Brassica carinata HOM05D001498 ORTHO05D092207 7.4e-14 82.0 89 53.9
BcaB01g01371 Brassica carinata HOM05D001498 ORTHO05D091381 9.6e-14 81.6 180 44.4
BcaB04g18314 Brassica carinata HOM05D001498 ORTHO05D095953 9.6e-14 81.6 72 54.2
BcaB05g22943 Brassica carinata HOM05D001498 ORTHO05D096110 9.6e-14 81.6 84 51.2
BcaC07g38657 Brassica carinata HOM05D001498 ORTHO05D011506 9.6e-14 81.6 107 44.9
BcaC04g19551 Brassica carinata HOM05D001498 ORTHO05D090991 1.3e-13 81.3 86 51.2
BcaB07g33085 Brassica carinata HOM05D001498 ORTHO05D095625 2.8e-13 80.1 107 43.0
BcaB07g33217 Brassica carinata HOM05D001498 ORTHO05D093085 2.8e-13 80.1 89 52.8
BcaB06g26727 Brassica carinata HOM05D001498 ORTHO05D093134 3.7e-13 79.7 105 47.6
BcaB03g16152 Brassica carinata HOM05D001498 ORTHO05D093112 4.8e-13 79.3 107 45.8
BcaB07g32913 Brassica carinata HOM05D001498 ORTHO05D091922 4.8e-13 79.3 86 48.8
BcaB07g33754 Brassica carinata HOM05D001498 ORTHO05D092729 6.2e-13 79.0 68 57.4
C06p31050 Brassica napus HOM05D001498 ORTHO05D011506 6.2e-13 79.0 107 44.9
BolC1t03827H Brassica oleracea HOM05D001498 ORTHO05D011506 6.2e-13 79.0 107 44.9
BcaB06g26483 Brassica carinata HOM05D001498 ORTHO05D095599 8.1e-13 78.6 107 43.0
BcaB07g33213 Brassica carinata HOM05D001498 ORTHO05D090837 8.1e-13 78.6 74 59.5
C03p66370 Brassica napus HOM05D001498 ORTHO05D011506 1.8e-12 77.4 107 43.9
BolC2t11288H Brassica oleracea HOM05D001498 ORTHO05D011506 1.8e-12 77.4 107 43.9
BcaC08g44373 Brassica carinata HOM05D001498 ORTHO05D011506 2.4e-12 77.0 107 43.0
C09p27470 Brassica napus HOM05D001498 ORTHO05D011506 2.4e-12 77.0 107 45.8
BcaB05g23246 Brassica carinata HOM05D001498 ORTHO05D090900 3.1e-12 76.6 88 50.0
C01p48970 Brassica napus HOM05D001498 ORTHO05D011506 3.1e-12 76.6 115 40.0
BcaB06g26678 Brassica carinata HOM05D001498 ORTHO05D094527 4.0e-12 76.3 74 56.8
BcaB07g33220 Brassica carinata HOM05D001498 ORTHO05D096371 4.0e-12 76.3 97 44.3
BcaB05g23120 Brassica carinata HOM05D001498 ORTHO05D090647 5.3e-12 75.9 90 48.9
BolC8t49067H Brassica oleracea HOM05D001498 ORTHO05D011506 5.3e-12 75.9 107 43.9
BcaB05g23244 Brassica carinata HOM05D001498 ORTHO05D095601 6.9e-12 75.5 94 51.1
BcaB06g27273 Brassica carinata HOM05D001498 ORTHO05D094467 6.9e-12 75.5 104 47.1
BcaC08g44056 Brassica carinata HOM05D001498 ORTHO05D091470 6.9e-12 75.5 108 44.4
BcaC09g50109 Brassica carinata HOM05D001498 ORTHO05D093510 6.9e-12 75.5 93 49.5
BcaB06g26648 Brassica carinata HOM05D001498 ORTHO05D094209 9.0e-12 75.1 135 40.0
BolC3t19484H Brassica oleracea HOM05D001498 ORTHO05D011506 9.0e-12 75.1 107 43.9
BcaC05g27519 Brassica carinata HOM05D001498 ORTHO05D011506 1.2e-11 74.7 92 47.8
C07p49110 Brassica napus HOM05D001498 ORTHO05D097837 1.2e-11 74.7 177 34.5
BcaB01g01816 Brassica carinata HOM05D001498 ORTHO05D091844 2.0e-11 73.9 99 49.5
BcaC02g09114 Brassica carinata HOM05D001498 ORTHO05D011506 2.0e-11 73.9 84 50.0
BcaB07g32352 Brassica carinata HOM05D001498 ORTHO05D021639 2.6e-11 73.6 107 43.9
C01p30520 Brassica napus HOM05D001498 ORTHO05D001885 2.6e-11 73.6 101 42.6
BcaB02g11279 Brassica carinata HOM05D001498 ORTHO05D095830 3.4e-11 73.2 87 44.8
C08p17880 Brassica napus HOM05D001498 ORTHO05D001885 3.4e-11 73.2 100 44.0
BolC1t02817H Brassica oleracea HOM05D001498 ORTHO05D106172 3.4e-11 73.2 107 43.9
A08p09540 Brassica napus HOM05D001498 ORTHO05D011506 9.9e-11 71.6 98 46.9
A08p07550 Brassica napus HOM05D001498 ORTHO05D011506 1.3e-10 71.2 177 31.6
C03p56230 Brassica napus HOM05D001498 ORTHO05D001885 1.3e-10 71.2 174 35.6
A01p28560 Brassica napus HOM05D001498 ORTHO05D021639 1.7e-10 70.9 63 57.1
C09p16580 Brassica napus HOM05D001498 ORTHO05D011506 1.7e-10 70.9 177 32.8
BcaB03g15933 Brassica carinata HOM05D001498 ORTHO05D021639 2.2e-10 70.5 107 42.1
BcaC09g48967 Brassica carinata HOM05D001498 ORTHO05D011506 2.2e-10 70.5 98 42.9
C09p17600 Brassica napus HOM05D001498 ORTHO05D011506 2.2e-10 70.5 174 33.9
BraA03t15290Z Brassica rapa HOM05D001498 ORTHO05D011506 2.9e-10 70.1 98 42.9
BcaB04g17490 Brassica carinata HOM05D001498 ORTHO05D019959 3.8e-10 69.7 72 52.8
BcaB04g17703 Brassica carinata HOM05D001498 ORTHO05D021639 3.8e-10 69.7 94 42.6
BcaC04g20364 Brassica carinata HOM05D001498 ORTHO05D011506 3.8e-10 69.7 98 42.9
C04p36710 Brassica napus HOM05D001498 ORTHO05D001885 3.8e-10 69.7 101 41.6
BcaB03g16298 Brassica carinata HOM05D001498 ORTHO05D095831 4.9e-10 69.3 105 43.8
BcaB01g01309 Brassica carinata HOM05D001498 ORTHO05D091216 8.4e-10 68.6 79 49.4
A08p06060 Brassica napus HOM05D001498 ORTHO05D011506 8.4e-10 68.6 85 47.1
C04p21380 Brassica napus HOM05D001498 ORTHO05D013028 8.4e-10 68.6 171 33.3
BolC8t47367H Brassica oleracea HOM05D001498 ORTHO05D011506 8.4e-10 68.6 107 40.2
C01p44920 Brassica napus HOM05D001498 ORTHO05D011506 1.1e-09 68.2 177 33.3
BolC9t54653H Brassica oleracea HOM05D001498 ORTHO05D011506 1.1e-09 68.2 177 33.9
BcaB02g11277 Brassica carinata HOM05D001498 ORTHO05D091891 1.4e-09 67.8 79 48.1
C03p66000 Brassica napus HOM05D001498 ORTHO05D001885 1.4e-09 67.8 174 34.5
BcaC05g25872 Brassica carinata HOM05D001498 ORTHO05D011506 1.9e-09 67.4 167 32.9
C01p38680 Brassica napus HOM05D001498 ORTHO05D011506 1.9e-09 67.4 171 33.3
C02p52020 Brassica napus HOM05D001498 ORTHO05D011506 1.9e-09 67.4 173 32.4
BolC3t17911H Brassica oleracea HOM05D001498 ORTHO05D008559 3.2e-09 66.6 177 32.8
BcaB05g24509 Brassica carinata HOM05D001379 ORTHO05D001277 7.1e-09 65.5 63 57.1
A03p54380 Brassica napus HOM05D001498 ORTHO05D011506 1.2e-08 64.7 169 33.7
C01p30560 Brassica napus HOM05D001498 ORTHO05D011506 2.7e-08 63.5 172 32.0
BraA08t32774Z Brassica rapa HOM05D001498 ORTHO05D001885 2.7e-08 63.5 177 31.1
BcaB03g16624 Brassica carinata HOM05D008414 ORTHO05D095320 3.5e-08 63.2 113 50.4
BcaB08g35076 Brassica carinata HOM05D001498 ORTHO05D021639 3.5e-08 63.2 98 42.9
C09p21170 Brassica napus HOM05D001498 ORTHO05D011506 3.5e-08 63.2 97 42.3
BolC9t55019H Brassica oleracea HOM05D001498 ORTHO05D011506 3.5e-08 63.2 97 42.3
C04p09850 Brassica napus HOM05D001498 ORTHO05D101798 6.0e-08 62.4 52 63.5
BcaB04g18432 Brassica carinata HOM05D001498 ORTHO05D090882 1.3e-07 61.2 98 41.8
BcaB06g25739 Brassica carinata HOM05D001498 ORTHO05D093323 1.8e-07 60.8 98 41.8
C02p53500 Brassica napus HOM05D001498 ORTHO05D001885 2.3e-07 60.5 171 31.6
BcaB06g25736 Brassica carinata HOM05D001498 ORTHO05D021639 3.0e-07 60.1 75 46.7
BcaB08g35461 Brassica carinata HOM05D001498 ORTHO05D090491 3.0e-07 60.1 97 39.2
BcaB06g26755 Brassica carinata HOM05D001498 ORTHO05D092466 3.9e-07 59.7 75 45.3
BcaC01g03078 Brassica carinata HOM05D001498 ORTHO05D008559 2.5e-06 57.0 84 47.6
BcaC02g10287 Brassica carinata HOM05D001498 ORTHO05D093229 3.3e-06 56.6 107 39.3
C07p05300 Brassica napus HOM05D001498 ORTHO05D100683 4.3e-06 56.2 107 79.4


User provided reference genes

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