Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g35461 Brassica carinata HOM05D004128 ORTHO05D018561 2.0e-66 256.1 189 100.0
C02p41980 Brassica napus HOM05D004128 ORTHO05D008395 9.2e-43 177.6 217 73.3
C03p49800 Brassica napus HOM05D004128 ORTHO05D018561 6.9e-38 161.4 216 69.4
C07p34800 Brassica napus HOM05D004128 ORTHO05D008395 7.6e-37 157.9 175 69.1
BolC4t25488H Brassica oleracea HOM05D004128 ORTHO05D018561 7.6e-37 157.9 166 73.5
C06p37060 Brassica napus HOM05D004128 ORTHO05D008395 1.4e-35 153.7 173 69.9
A09p66370 Brassica napus HOM05D000181 ORTHO05D003134 2.4e-35 152.9 199 72.9
BcaC09g50406 Brassica carinata HOM05D004128 ORTHO05D008395 7.1e-35 151.4 164 72.0
C02p36290 Brassica napus HOM05D004128 ORTHO05D097649 6.0e-34 148.3 163 73.0
A05p20890 Brassica napus HOM05D004128 ORTHO05D008395 1.0e-33 147.5 199 71.4
BraA05t20993Z Brassica rapa HOM05D004128 ORTHO05D008395 1.0e-33 147.5 199 71.4
C01p25840 Brassica napus HOM05D004128 ORTHO05D008395 1.3e-33 147.1 164 70.7
BcaC01g00877 Brassica carinata HOM05D004128 ORTHO05D018561 8.7e-33 144.4 177 68.4
BraA09t38472Z Brassica rapa HOM05D004128 ORTHO05D008395 1.6e-31 140.2 201 66.7
C06p23810 Brassica napus HOM05D004128 ORTHO05D013239 8.1e-31 137.9 163 69.3
BcaC01g04075 Brassica carinata HOM05D004128 ORTHO05D018561 1.3e-28 130.6 78 82.1
BcaC04g20235 Brassica carinata HOM05D004128 ORTHO05D018561 1.9e-27 126.7 79 83.5
C08p39080 Brassica napus HOM05D004128 ORTHO05D018561 3.5e-26 122.5 194 67.5
A10p06920 Brassica napus HOM05D004128 ORTHO05D028143 3.9e-25 119.0 177 72.3
BcaC07g39620 Brassica carinata HOM05D004128 ORTHO05D008395 5.1e-25 118.6 73 78.1
BcaC04g21799 Brassica carinata HOM05D004128 ORTHO05D018561 8.7e-25 117.9 153 67.3
BcaC01g01241 Brassica carinata HOM05D004128 ORTHO05D092402 3.7e-23 112.5 159 64.2
BraA07t30708Z Brassica rapa HOM05D004128 ORTHO05D008395 7.6e-21 104.8 156 59.6
C03p70570 Brassica napus HOM05D004128 ORTHO05D008395 2.2e-20 103.2 61 85.2
BcaC07g40907 Brassica carinata HOM05D004128 ORTHO05D008395 3.8e-20 102.4 74 73.0
BraA10t42724Z Brassica rapa HOM05D004128 ORTHO05D008395 4.9e-20 102.1 110 59.1
BraA09t37797Z Brassica rapa HOM05D004128 ORTHO05D024629 2.5e-19 99.8 61 82.0
BolC6t36978H Brassica oleracea HOM05D004128 ORTHO05D008395 3.2e-19 99.4 165 61.2
C03p82170 Brassica napus HOM05D004128 ORTHO05D024629 5.5e-19 98.6 61 80.3
BolC3t20535H Brassica oleracea HOM05D004128 ORTHO05D024629 5.5e-19 98.6 61 80.3
BolC3t20838H Brassica oleracea HOM05D004128 ORTHO05D104579 2.7e-18 96.3 94 60.6
C01p27640 Brassica napus HOM05D004128 ORTHO05D008395 6.0e-18 95.1 58 82.8
BolC6t35308H Brassica oleracea HOM05D004128 ORTHO05D008395 5.1e-17 92.0 96 57.3
BcaB04g17725 Brassica carinata HOM05D004128 ORTHO05D008395 6.7e-17 91.7 160 40.6
BcaB07g32839 Brassica carinata HOM05D004128 ORTHO05D008395 8.7e-17 91.3 151 42.4
BcaB04g18992 Brassica carinata HOM05D004128 ORTHO05D095711 3.3e-16 89.4 156 48.1
BcaB05g22460 Brassica carinata HOM05D008735 ORTHO05D094962 3.3e-16 89.4 156 48.1
BcaB04g17661 Brassica carinata HOM05D004128 ORTHO05D008395 9.6e-16 87.8 195 41.0
BolC6t38817H Brassica oleracea HOM05D004128 ORTHO05D013239 3.7e-15 85.9 96 54.2
BolC7t43900H Brassica oleracea HOM05D004128 ORTHO05D008395 5.3e-14 82.0 80 58.8
C04p32440 Brassica napus HOM05D008735 ORTHO05D099532 6.9e-14 81.6 158 54.4
A02p26840 Brassica napus HOM05D007203 ORTHO05D013810 1.2e-13 80.9 85 52.9
BraA02t07693Z Brassica rapa HOM05D007203 ORTHO05D013810 1.2e-13 80.9 85 52.9
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 1.5e-13 80.5 174 41.4
BraA09t37753Z Brassica rapa HOM05D007203 ORTHO05D013810 2.0e-13 80.1 85 52.9
BcaC02g08829 Brassica carinata HOM05D007203 ORTHO05D027555 5.8e-13 78.6 87 55.2
A09p21540 Brassica napus HOM05D007203 ORTHO05D013810 5.8e-13 78.6 85 51.8
BolC9t55613H Brassica oleracea HOM05D004128 ORTHO05D008395 5.8e-13 78.6 96 51.0
BolC9t57647H Brassica oleracea HOM05D004128 ORTHO05D024421 1.0e-12 77.8 87 54.0
C06p53090 Brassica napus HOM05D008735 ORTHO05D097507 1.3e-12 77.4 161 40.4
BolC8t47837H Brassica oleracea HOM05D004128 ORTHO05D008395 2.9e-12 76.3 104 50.0
BolC8t49801H Brassica oleracea HOM05D007203 ORTHO05D013810 2.9e-12 76.3 161 49.1
A01p27690 Brassica napus HOM05D007203 ORTHO05D013810 3.8e-12 75.9 94 50.0
C05p41890 Brassica napus HOM05D004128 ORTHO05D024421 3.8e-12 75.9 105 48.6
BraA01t02907Z Brassica rapa HOM05D007203 ORTHO05D013810 3.8e-12 75.9 94 50.0
BcaC04g20090 Brassica carinata HOM05D004128 ORTHO05D008395 8.4e-12 74.7 87 52.9
BraA09t38520Z Brassica rapa HOM05D004128 ORTHO05D008395 3.2e-11 72.8 107 51.4
C01p16000 Brassica napus HOM05D007203 ORTHO05D097579 5.5e-11 72.0 181 39.8
C03p33430 Brassica napus HOM05D007203 ORTHO05D013810 5.5e-11 72.0 94 47.9
BraA08t33244Z Brassica rapa HOM05D004128 ORTHO05D008395 7.1e-11 71.6 107 50.5
BolC6t39170H Brassica oleracea HOM05D004128 ORTHO05D008395 9.3e-11 71.2 175 44.6
C03p80320 Brassica napus HOM05D008735 ORTHO05D097331 2.7e-10 69.7 145 55.9
C09p37460 Brassica napus HOM05D004128 ORTHO05D008395 3.5e-10 69.3 87 55.2
BcaC08g44612 Brassica carinata HOM05D007203 ORTHO05D011558 6.1e-10 68.6 84 50.0
C03p46960 Brassica napus HOM05D008735 ORTHO05D099308 6.1e-10 68.6 147 52.4
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 1.0e-09 67.8 171 46.2
C02p46650 Brassica napus HOM05D008735 ORTHO05D098808 2.3e-09 66.6 145 57.9
C03p79170 Brassica napus HOM05D008735 ORTHO05D098026 2.3e-09 66.6 145 55.2
BcaC08g45091 Brassica carinata HOM05D004128 ORTHO05D008395 3.9e-09 65.9 80 55.0
BolC6t37871H Brassica oleracea HOM05D004128 ORTHO05D008395 3.9e-09 65.9 178 47.2
BcaC05g27574 Brassica carinata HOM05D007203 ORTHO05D039927 5.1e-09 65.5 79 51.9
BcaC03g15146 Brassica carinata HOM05D004128 ORTHO05D008395 1.1e-08 64.3 142 40.8
BcaC04g20967 Brassica carinata HOM05D004128 ORTHO05D008395 1.1e-08 64.3 78 57.7
BcaC02g12420 Brassica carinata HOM05D007203 ORTHO05D027555 1.5e-08 63.9 99 47.5
C03p85510 Brassica napus HOM05D004128 ORTHO05D013239 1.5e-08 63.9 47 74.5
C04p37860 Brassica napus HOM05D008735 ORTHO05D099266 1.9e-08 63.5 144 54.2
BcaB05g23062 Brassica carinata HOM05D004128 ORTHO05D092751 4.3e-08 62.4 84 42.9
BcaC03g14469 Brassica carinata HOM05D004128 ORTHO05D008395 4.3e-08 62.4 85 50.6
BcaB05g23656 Brassica carinata HOM05D004128 ORTHO05D008395 5.7e-08 62.0 157 40.1
BcaB08g34543 Brassica carinata HOM05D007203 ORTHO05D011558 5.7e-08 62.0 99 42.4
BcaC04g22448 Brassica carinata HOM05D004128 ORTHO05D096019 5.7e-08 62.0 117 62.4
BolC2t07285H Brassica oleracea HOM05D004128 ORTHO05D008395 4.8e-07 58.9 96 44.8
BcaB01g01921 Brassica carinata HOM05D007203 ORTHO05D011558 8.2e-07 58.2 78 50.0
BcaB02g11374 Brassica carinata HOM05D004128 ORTHO05D008395 8.2e-07 58.2 91 40.7
BcaC09g51181 Brassica carinata HOM05D004128 ORTHO05D024421 8.2e-07 58.2 89 48.3
A06p29400 Brassica napus HOM05D004128 ORTHO05D008395 8.2e-07 58.2 49 63.3
C01p48550 Brassica napus HOM05D004128 ORTHO05D008395 8.2e-07 58.2 49 63.3
C08p21910 Brassica napus HOM05D004128 ORTHO05D008395 8.2e-07 58.2 49 63.3
BolC9t58725H Brassica oleracea HOM05D004128 ORTHO05D008395 8.2e-07 58.2 49 63.3
A08p09180 Brassica napus HOM05D004128 ORTHO05D008395 1.8e-06 57.0 160 45.6
C09p28930 Brassica napus HOM05D007203 ORTHO05D008395 2.4e-06 56.6 94 41.5
BolC2t09432H Brassica oleracea HOM05D004128 ORTHO05D008395 2.4e-06 56.6 49 61.2
BcaC07g37436 Brassica carinata HOM05D004128 ORTHO05D008395 3.1e-06 56.2 71 57.7
BolC5t32922H Brassica oleracea HOM05D004128 ORTHO05D033837 3.1e-06 56.2 83 47.0
BcaC01g00586 Brassica carinata HOM05D007203 ORTHO05D031716 4.1e-06 55.8 86 52.3
C03p57000 Brassica napus HOM05D007203 ORTHO05D031716 4.1e-06 55.8 95 48.4
C03p60470 Brassica napus HOM05D004128 ORTHO05D008395 4.1e-06 55.8 49 59.2
BcaC07g37515 Brassica carinata HOM05D004128 ORTHO05D008395 9.0e-06 54.7 76 51.3
C05p35590 Brassica napus HOM05D007203 ORTHO05D039927 9.0e-06 54.7 68 51.5


User provided reference genes

Program Settings