Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g35377 Brassica carinata HOM05D007416 ORTHO05D009329 3.1e-37 157.9 78 100.0
BcaNung06837 Brassica carinata HOM05D007416 ORTHO05D009329 3.1e-37 157.9 78 100.0
C07p16790 Brassica napus HOM05D007416 ORTHO05D009329 5.2e-32 140.6 112 69.6
BolC7t42186H Brassica oleracea HOM05D007416 ORTHO05D009329 4.1e-29 131.0 112 67.9
BraA07t28904Z Brassica rapa HOM05D007416 ORTHO05D009329 5.9e-28 127.1 112 64.3
BcaB03g12097 Brassica carinata HOM05D007416 ORTHO05D009329 8.8e-24 113.2 112 58.0
Sp1g24790 Schrenkiella parvula HOM05D007416 ORTHO05D009329 4.9e-22 107.5 112 58.9
BcaC01g00068 Brassica carinata HOM05D007416 ORTHO05D009329 7.7e-20 100.1 110 52.7
C03p75360 Brassica napus HOM05D007416 ORTHO05D009329 7.2e-18 93.6 106 50.0
CARHR028020 Cardamine hirsuta HOM05D007416 ORTHO05D009329 2.8e-17 91.7 110 51.8
BolC3t19794H Brassica oleracea HOM05D007416 ORTHO05D009329 8.0e-17 90.1 101 50.5
Thhalv10009143m.g Eutrema salsugineum HOM05D007416 ORTHO05D009329 1.0e-16 89.7 116 50.9
A08p25450 Brassica napus HOM05D007416 ORTHO05D009329 2.3e-16 88.6 112 50.0
AL1G42170 Arabidopsis lyrata HOM05D007416 ORTHO05D009329 3.4e-15 84.7 112 51.8
BraA08t34496Z Brassica rapa HOM05D007416 ORTHO05D009329 7.5e-15 83.6 110 48.2
A07p11140 Brassica napus HOM05D007416 ORTHO05D009329 1.1e-13 79.7 48 85.4
AT1G28540 Arabidopsis thaliana HOM05D007416 ORTHO05D009329 8.6e-11 70.1 112 48.2
THA.LOC104812624 Tarenaya hassleriana HOM05D007416 ORTHO05D009329 5.2e-08 60.8 103 37.9
Carub.0001s2700 Capsella rubella HOM05D007416 ORTHO05D009329 9.8e-07 56.6 101 42.6


User provided reference genes

Program Settings