Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g35282 Brassica carinata HOM05D003040 ORTHO05D003443 2.2e-42 175.3 90 100.0
C07p17820 Brassica napus HOM05D003040 ORTHO05D003443 6.0e-40 167.2 86 97.7
BolC7t42288H Brassica oleracea HOM05D003040 ORTHO05D003443 6.0e-40 167.2 86 97.7
BraA07t28972Z Brassica rapa HOM05D003040 ORTHO05D003443 1.3e-34 149.4 85 90.6
A07p11880 Brassica napus HOM05D003040 ORTHO05D003443 1.7e-34 149.1 86 91.9
BcaB03g13990 Brassica carinata HOM05D003040 ORTHO05D003443 1.9e-25 119.0 85 77.6
CARHR026960 Cardamine hirsuta HOM05D003040 ORTHO05D003443 6.0e-24 114.0 88 69.3
BcaC01g06956 Brassica carinata HOM05D003040 ORTHO05D003443 6.6e-23 110.5 88 69.3
BcaC05g26552 Brassica carinata HOM05D002231 ORTHO05D006103 1.2e-21 106.3 86 67.4
BcaC05g26745 Brassica carinata HOM05D002231 ORTHO05D006103 8.1e-21 103.6 86 69.8
AL1G40780 Arabidopsis lyrata HOM05D003040 ORTHO05D003443 5.2e-20 100.9 115 53.9
Sp1g23600 Schrenkiella parvula HOM05D003040 ORTHO05D003443 5.2e-20 100.9 85 68.2
BcaC01g01617 Brassica carinata HOM05D003040 ORTHO05D003443 7.6e-19 97.1 88 63.6
C03p73720 Brassica napus HOM05D003040 ORTHO05D003443 7.6e-19 97.1 88 63.6
BolC3t19663H Brassica oleracea HOM05D003040 ORTHO05D003443 7.6e-19 97.1 88 63.6
BraA09t39362Z Brassica rapa HOM05D003040 ORTHO05D003443 7.1e-17 90.5 115 52.2
Carub.0001s2591 Capsella rubella HOM05D003040 ORTHO05D003443 3.0e-15 85.1 118 50.8
BcaB03g13989 Brassica carinata HOM05D002231 ORTHO05D006103 1.8e-12 75.9 100 53.0
A08p26350 Brassica napus HOM05D003040 ORTHO05D003443 5.3e-12 74.3 112 45.5
BraA08t34586Z Brassica rapa HOM05D003040 ORTHO05D003443 5.3e-12 74.3 112 45.5
A09p38560 Brassica napus HOM05D003040 ORTHO05D003443 7.8e-08 60.5 46 67.4
C05p26080 Brassica napus HOM05D003040 ORTHO05D003443 3.9e-07 58.2 46 63.0
QL10p044472 Quercus lobata HOM05D003040 ORTHO05D003443 6.6e-07 57.4 92 40.2


User provided reference genes

Program Settings