Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g35207 Brassica carinata HOM05D024254 ORTHO05D020126 1.3e-60 237.3 258 100.0
BcaC01g05748 Brassica carinata HOM05D000071 ORTHO05D000029 7.2e-30 135.2 145 95.9
C03p22610 Brassica napus HOM05D000071 ORTHO05D000029 7.2e-30 135.2 145 95.9
A03p19370 Brassica napus HOM05D000071 ORTHO05D000029 3.9e-28 129.4 144 93.8
C07p18660 Brassica napus HOM05D000071 ORTHO05D020126 1.3e-18 97.8 48 100.0
BolC7t42377H Brassica oleracea HOM05D000071 ORTHO05D020126 1.3e-18 97.8 48 100.0
CARHR129100 Cardamine hirsuta HOM05D000071 ORTHO05D000029 1.2e-11 74.7 146 76.0
A05p10740 Brassica napus HOM05D000071 ORTHO05D000029 3.4e-11 73.2 122 86.1
BraA05t20018Z Brassica rapa HOM05D000071 ORTHO05D000029 3.4e-11 73.2 122 86.1
Thhalv10016209m.g Eutrema salsugineum HOM05D000071 ORTHO05D000029 7.5e-11 72.0 144 76.4
Sp4g17230 Schrenkiella parvula HOM05D000071 ORTHO05D000029 1.7e-10 70.9 144 76.4
BcaB02g09495 Brassica carinata HOM05D000071 ORTHO05D000029 2.8e-10 70.1 119 87.4
BcaC02g11577 Brassica carinata HOM05D000071 ORTHO05D000029 2.8e-10 70.1 119 86.6
C04p13830 Brassica napus HOM05D000071 ORTHO05D000029 2.8e-10 70.1 119 86.6
BolC4t22973H Brassica oleracea HOM05D000071 ORTHO05D000029 4.8e-10 69.3 119 86.6
BraA03t11192Z Brassica rapa HOM05D024254 ORTHO05D020126 4.8e-10 69.3 34 91.2
Aa31LG9G16280 Aethionema arabicum HOM05D000071 ORTHO05D000029 1.2e-08 64.7 142 73.9
C02p59630 Brassica napus HOM05D024254 ORTHO05D020126 5.9e-08 62.4 31 96.8
BolC2t12025H Brassica oleracea HOM05D024254 ORTHO05D020126 5.9e-08 62.4 31 96.8
A03p19360 Brassica napus HOM05D000071 ORTHO05D000029 2.2e-07 60.5 34 79.4
BolC7t42378H Brassica oleracea HOM05D024254 ORTHO05D020126 2.5e-06 57.0 31 90.3
BolC3t14659H Brassica oleracea HOM05D000071 ORTHO05D000029 5.5e-06 55.8 29 93.1


User provided reference genes

Program Settings