Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g35172 Brassica carinata HOM05D003839 ORTHO05D003352 7.5e-29 129.8 64 100.0
BcaC05g27209 Brassica carinata HOM05D003839 ORTHO05D003352 7.0e-27 123.2 64 95.3
BraA01t02837Z Brassica rapa HOM05D003839 ORTHO05D003352 1.2e-23 112.5 59 94.9
A05p21770 Brassica napus HOM05D003839 ORTHO05D003352 1.4e-22 109.0 59 91.5
BraA05t21098Z Brassica rapa HOM05D003839 ORTHO05D003352 1.4e-22 109.0 59 91.5
BcaC05g27601 Brassica carinata HOM05D003839 ORTHO05D003352 1.5e-21 105.5 59 89.8
BcaC07g38083 Brassica carinata HOM05D003839 ORTHO05D003352 1.5e-21 105.5 59 89.8
A02p28670 Brassica napus HOM05D003839 ORTHO05D003352 1.5e-21 105.5 59 89.8
C05p35870 Brassica napus HOM05D003839 ORTHO05D003352 1.5e-21 105.5 59 89.8
C05p53340 Brassica napus HOM05D003839 ORTHO05D003352 1.5e-21 105.5 59 89.8
BraA02t07902Z Brassica rapa HOM05D003839 ORTHO05D003352 1.5e-21 105.5 59 89.8
BolC2t09048H Brassica oleracea HOM05D003839 ORTHO05D003352 5.7e-21 103.6 59 89.8
BcaC05g29109 Brassica carinata HOM05D003839 ORTHO05D003352 7.5e-21 103.2 59 88.1
C05p53370 Brassica napus HOM05D003839 ORTHO05D003352 7.5e-21 103.2 59 88.1
C03p63060 Brassica napus HOM05D003839 ORTHO05D003352 1.3e-20 102.4 59 88.1
BolC8t48491H Brassica oleracea HOM05D003839 ORTHO05D003352 1.3e-20 102.4 59 86.4
BcaC03g15184 Brassica carinata HOM05D003839 ORTHO05D003352 1.7e-20 102.1 59 88.1
C02p27640 Brassica napus HOM05D003839 ORTHO05D003352 1.7e-20 102.1 59 88.1
BolC9t57767H Brassica oleracea HOM05D003839 ORTHO05D003352 1.7e-20 102.1 59 88.1
BolC5t32306H Brassica oleracea HOM05D003839 ORTHO05D003352 2.9e-20 101.3 59 86.4
BcaC06g33695 Brassica carinata HOM05D003839 ORTHO05D003352 3.7e-20 100.9 59 86.4
BolC5t34007H Brassica oleracea HOM05D003839 ORTHO05D003352 3.7e-20 100.9 59 84.7
BcaC04g22104 Brassica carinata HOM05D003839 ORTHO05D003352 4.9e-20 100.5 59 86.4
A05p21290 Brassica napus HOM05D003839 ORTHO05D003352 4.9e-20 100.5 59 86.4
BraA05t21037Z Brassica rapa HOM05D003839 ORTHO05D003352 4.9e-20 100.5 59 86.4
BcaC06g36011 Brassica carinata HOM05D003839 ORTHO05D003352 6.4e-20 100.1 59 86.4
BcaB07g32710 Brassica carinata HOM05D003839 ORTHO05D003352 2.8e-15 84.7 59 72.9
C02p27160 Brassica napus HOM05D003839 ORTHO05D003352 1.0e-14 82.8 45 88.9
BcaB08g35818 Brassica carinata HOM05D003839 ORTHO05D003352 8.9e-14 79.7 59 71.2
BcaB04g17572 Brassica carinata HOM05D003839 ORTHO05D003352 3.4e-13 77.8 59 67.8
BcaB01g01517 Brassica carinata HOM05D003839 ORTHO05D003352 9.8e-13 76.3 59 71.2
BolC6t38134H Brassica oleracea HOM05D003839 ORTHO05D003352 2.9e-12 74.7 59 71.2
BcaB08g35819 Brassica carinata HOM05D003839 ORTHO05D003352 3.7e-12 74.3 59 64.4
BolC2t11209H Brassica oleracea HOM05D003839 ORTHO05D003352 3.7e-12 74.3 59 67.8
BcaC03g17190 Brassica carinata HOM05D003839 ORTHO05D003352 4.9e-12 73.9 59 67.8
A03p67260 Brassica napus HOM05D003839 ORTHO05D003352 4.9e-12 73.9 59 69.5
BraA01t02749Z Brassica rapa HOM05D003839 ORTHO05D003352 4.9e-12 73.9 59 69.5
A04p07260 Brassica napus HOM05D003839 ORTHO05D003352 6.4e-12 73.6 59 67.8
BraA04t16421Z Brassica rapa HOM05D003839 ORTHO05D003352 6.4e-12 73.6 59 67.8
BcaB01g00721 Brassica carinata HOM05D003839 ORTHO05D003352 1.1e-11 72.8 58 63.8
BcaC03g17189 Brassica carinata HOM05D003839 ORTHO05D003352 2.4e-11 71.6 59 66.1
BraA01t03014Z Brassica rapa HOM05D003839 ORTHO05D003352 4.1e-11 70.9 59 66.1
A09p32650 Brassica napus HOM05D003839 ORTHO05D003352 5.4e-11 70.5 59 66.1
BcaB05g23505 Brassica carinata HOM05D003839 ORTHO05D003352 9.2e-11 69.7 59 67.8
BcaB06g26804 Brassica carinata HOM05D003839 ORTHO05D003352 9.2e-11 69.7 58 63.8
C04p41030 Brassica napus HOM05D003839 ORTHO05D003352 1.6e-10 68.9 59 67.8
BolC4t25686H Brassica oleracea HOM05D003839 ORTHO05D003352 1.6e-10 68.9 59 67.8
A05p17610 Brassica napus HOM05D003839 ORTHO05D003352 2.0e-10 68.6 59 66.1
BcaB03g16839 Brassica carinata HOM05D003839 ORTHO05D003352 3.5e-10 67.8 58 58.6
BcaB05g23095 Brassica carinata HOM05D003839 ORTHO05D003352 6.0e-10 67.0 58 58.6
BcaB06g27258 Brassica carinata HOM05D003839 ORTHO05D003352 1.0e-09 66.2 58 58.6
C02p51180 Brassica napus HOM05D003839 ORTHO05D003352 1.3e-09 65.9 53 67.9
BcaB04g17113 Brassica carinata HOM05D003839 ORTHO05D003352 1.7e-09 65.5 58 58.6
BcaB04g18348 Brassica carinata HOM05D003839 ORTHO05D003352 1.7e-09 65.5 59 57.6
BcaB07g32949 Brassica carinata HOM05D003839 ORTHO05D003352 1.7e-09 65.5 58 56.9
BcaC09g50233 Brassica carinata HOM05D003839 ORTHO05D003352 3.9e-09 64.3 39 87.2
BcaB01g00717 Brassica carinata HOM05D003839 ORTHO05D003352 8.6e-09 63.2 53 60.4
BcaB06g26196 Brassica carinata HOM05D003839 ORTHO05D003352 1.1e-08 62.8 59 54.2
BcaB01g02875 Brassica carinata HOM05D003839 ORTHO05D003352 1.5e-08 62.4 57 57.9
BcaB05g23330 Brassica carinata HOM05D003839 ORTHO05D003352 2.5e-08 61.6 59 61.0
A05p20350 Brassica napus HOM05D003839 ORTHO05D003352 2.5e-08 61.6 59 61.0
BcaB02g06777 Brassica carinata HOM05D003839 ORTHO05D003352 3.3e-08 61.2 59 54.2
BcaB07g32609 Brassica carinata HOM05D003839 ORTHO05D003352 3.3e-08 61.2 53 58.5
BcaB06g27469 Brassica carinata HOM05D003839 ORTHO05D003352 2.1e-07 58.5 59 52.5
BcaB01g01663 Brassica carinata HOM05D003839 ORTHO05D003352 3.6e-07 57.8 59 50.8
C03p75260 Brassica napus HOM05D017666 ORTHO05D042826 1.1e-06 56.2 55 56.4
BolC3t19786H Brassica oleracea HOM05D017666 ORTHO05D042826 1.1e-06 56.2 55 56.4
BolC5t34095H Brassica oleracea HOM05D017666 ORTHO05D033272 1.1e-06 56.2 55 56.4
C05p54280 Brassica napus HOM05D017666 ORTHO05D033272 4.0e-06 54.3 55 54.5
BraA03t15418Z Brassica rapa HOM05D017666 ORTHO05D033272 6.8e-06 53.5 55 54.5
C09p43860 Brassica napus HOM05D017666 ORTHO05D003352 8.9e-06 53.1 55 54.5


User provided reference genes

Program Settings