Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g35099 Brassica carinata HOM05D000977 ORTHO05D010766 7.9e-146 520.4 257 100.0
BcaC08g44032 Brassica carinata HOM05D000977 ORTHO05D010766 1.4e-118 429.9 257 85.2
BolC4t24821H Brassica oleracea HOM05D000977 ORTHO05D010766 5.7e-112 407.9 255 82.7
C04p32580 Brassica napus HOM05D000977 ORTHO05D010766 2.7e-106 389.0 255 79.6
BcaB01g00648 Brassica carinata HOM05D000977 ORTHO05D010766 1.9e-91 339.7 273 66.3
BcaB01g03497 Brassica carinata HOM05D000977 ORTHO05D010766 8.3e-87 324.3 257 66.9
BcaB01g01670 Brassica carinata HOM05D000977 ORTHO05D010766 1.6e-82 310.1 273 63.4
C09p34630 Brassica napus HOM05D000977 ORTHO05D010766 2.1e-82 309.7 257 67.7
C07p19820 Brassica napus HOM05D000977 ORTHO05D010766 2.2e-79 299.7 257 66.5
C01p30780 Brassica napus HOM05D000977 ORTHO05D010766 2.3e-76 289.7 257 64.6
BcaB07g33258 Brassica carinata HOM05D000977 ORTHO05D010766 1.2e-74 283.9 272 58.5
C01p30920 Brassica napus HOM05D000977 ORTHO05D010766 1.3e-71 273.9 257 61.9
C05p32470 Brassica napus HOM05D000977 ORTHO05D010766 2.2e-71 273.1 257 61.5
C05p54540 Brassica napus HOM05D000977 ORTHO05D010766 1.4e-70 270.4 257 61.1
BcaC04g19757 Brassica carinata HOM05D000977 ORTHO05D010766 1.6e-69 266.9 257 59.5
BcaC05g29185 Brassica carinata HOM05D000977 ORTHO05D010766 2.1e-66 256.5 257 58.8
BcaC04g22154 Brassica carinata HOM05D000977 ORTHO05D010766 6.9e-57 224.9 164 73.8
C01p47170 Brassica napus HOM05D000977 ORTHO05D010766 1.7e-55 220.3 220 58.2
BcaC09g48661 Brassica carinata HOM05D000267 ORTHO05D010766 7.1e-54 214.9 244 53.7
C09p51950 Brassica napus HOM05D000977 ORTHO05D010766 1.8e-52 210.3 220 56.4
BcaC03g14434 Brassica carinata HOM05D000977 ORTHO05D010766 1.9e-51 206.8 188 63.3
C02p44180 Brassica napus HOM05D000977 ORTHO05D010766 5.8e-48 195.3 160 62.5
BraA01t02542Z Brassica rapa HOM05D000977 ORTHO05D010766 6.4e-47 191.8 99 91.9
BraA09t36955Z Brassica rapa HOM05D000977 ORTHO05D010766 6.4e-47 191.8 99 91.9
BraA09t37778Z Brassica rapa HOM05D000977 ORTHO05D010766 1.0e-44 184.5 99 88.9
BraA09t39669Z Brassica rapa HOM05D000977 ORTHO05D010766 5.1e-44 182.2 98 88.8
BolC7t42497H Brassica oleracea HOM05D000977 ORTHO05D010766 9.0e-41 171.4 87 94.3
BcaC03g16595 Brassica carinata HOM05D000977 ORTHO05D010766 2.5e-38 163.3 134 63.4
C03p70270 Brassica napus HOM05D000977 ORTHO05D010766 5.9e-32 142.1 140 57.9
BcaC09g51962 Brassica carinata HOM05D000977 ORTHO05D001094 6.1e-29 132.1 236 44.5
BcaC09g49944 Brassica carinata HOM05D000977 ORTHO05D010766 1.8e-28 130.6 74 87.8
BcaC05g27322 Brassica carinata HOM05D000977 ORTHO05D010766 2.3e-28 130.2 73 90.4
CARHR262600 Cardamine hirsuta HOM05D000977 ORTHO05D010766 1.1e-27 127.9 258 36.0
A02p27980 Brassica napus HOM05D000977 ORTHO05D010766 9.7e-27 124.8 120 55.8
A07p17880 Brassica napus HOM05D000977 ORTHO05D010766 1.8e-25 120.6 62 90.3
BcaC09g50762 Brassica carinata HOM05D000977 ORTHO05D010766 4.1e-25 119.4 88 70.5
BcaB05g23965 Brassica carinata HOM05D000977 ORTHO05D010766 1.8e-20 104.0 172 43.0
BcaNung01037 Brassica carinata HOM05D000977 ORTHO05D010766 6.7e-20 102.1 154 47.4
BcaC05g27321 Brassica carinata HOM05D000977 ORTHO05D010766 1.7e-18 97.4 66 74.2
BcaC09g48942 Brassica carinata HOM05D000977 ORTHO05D010766 5.0e-15 85.9 63 73.0
AL1G32780 Arabidopsis lyrata HOM05D021774 ORTHO05D002482 9.4e-14 81.6 257 30.7
AL2G32670 Arabidopsis lyrata HOM05D021774 ORTHO05D002482 9.4e-14 81.6 258 31.4
BcaC08g45962 Brassica carinata HOM05D000977 ORTHO05D010766 1.1e-11 74.7 53 77.4
AT3G30820 Arabidopsis thaliana HOM05D021774 ORTHO05D002482 1.3e-07 61.2 208 31.2
BcaC03g16457 Brassica carinata HOM05D003849 ORTHO05D017533 3.8e-07 59.7 139 30.2
Sp4g07820 Schrenkiella parvula HOM05D009295 ORTHO05D000016 6.5e-07 58.9 185 24.9
SpUn0001_0490 Schrenkiella parvula HOM05D009295 ORTHO05D002482 1.9e-06 57.4 86 33.7
SpUn0001_0850 Schrenkiella parvula HOM05D009295 ORTHO05D002482 1.9e-06 57.4 129 30.2


User provided reference genes

Program Settings