Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g35064 Brassica carinata HOM05D001498 ORTHO05D016694 6.9e-57 224.2 152 100.0
BcaC04g20545 Brassica carinata HOM05D001498 ORTHO05D016694 2.0e-48 196.1 149 87.2
BcaC06g35524 Brassica carinata HOM05D001498 ORTHO05D016694 2.2e-47 192.6 119 95.0
BolC4t23616H Brassica oleracea HOM05D001498 ORTHO05D016694 9.4e-46 187.2 119 93.3
BcaC02g11068 Brassica carinata HOM05D001498 ORTHO05D016694 1.2e-45 186.8 119 95.0
C04p20860 Brassica napus HOM05D001498 ORTHO05D016694 4.7e-45 184.9 119 92.4
C07p13940 Brassica napus HOM05D001379 ORTHO05D001277 1.8e-44 183.0 119 90.8
BolC1t03834H Brassica oleracea HOM05D001379 ORTHO05D001277 8.8e-44 180.6 119 92.4
BolC7t40930H Brassica oleracea HOM05D001379 ORTHO05D016694 8.8e-44 180.6 119 83.2
C01p38770 Brassica napus HOM05D001379 ORTHO05D001277 2.6e-43 179.1 119 91.6
BcaC06g36329 Brassica carinata HOM05D001498 ORTHO05D096194 1.7e-42 176.4 118 79.7
BolC9t57107H Brassica oleracea HOM05D001498 ORTHO05D016694 6.3e-42 174.5 119 89.1
C09p42290 Brassica napus HOM05D001498 ORTHO05D016694 1.8e-41 172.9 119 88.2
BcaC04g20544 Brassica carinata HOM05D001498 ORTHO05D016694 2.1e-37 159.5 149 78.5
BcaC05g27663 Brassica carinata HOM05D001498 ORTHO05D090842 8.8e-36 154.1 119 79.8
BcaB02g10765 Brassica carinata HOM05D001498 ORTHO05D095468 1.5e-30 136.7 122 72.1
BolC7t41038H Brassica oleracea HOM05D001498 ORTHO05D032253 1.5e-22 110.2 104 70.2
BcaC06g36230 Brassica carinata HOM05D001498 ORTHO05D032253 4.2e-22 108.6 104 69.2
C07p06210 Brassica napus HOM05D001498 ORTHO05D032253 4.2e-22 108.6 104 69.2
BolC5t31266H Brassica oleracea HOM05D001498 ORTHO05D019959 1.3e-18 97.1 117 49.6
BcaB04g17785 Brassica carinata HOM05D003591 ORTHO05D094524 1.2e-16 90.5 96 62.5
C05p25290 Brassica napus HOM05D001498 ORTHO05D019959 4.5e-16 88.6 72 65.3
BcaB02g11218 Brassica carinata HOM05D001224 ORTHO05D010571 5.9e-16 88.2 140 52.1
BcaC02g11926 Brassica carinata HOM05D001498 ORTHO05D019959 1.9e-14 83.2 71 62.0
BcaB06g26678 Brassica carinata HOM05D001498 ORTHO05D094527 2.8e-13 79.3 75 58.7
BcaB06g27205 Brassica carinata HOM05D001498 ORTHO05D091204 2.3e-12 76.3 67 62.7
BcaB01g01185 Brassica carinata HOM05D001498 ORTHO05D019959 8.9e-12 74.3 67 61.2
BcaB07g32989 Brassica carinata HOM05D001498 ORTHO05D008559 3.2e-09 65.9 115 40.0
BcaB01g01484 Brassica carinata HOM05D001498 ORTHO05D091615 7.0e-09 64.7 115 40.0
BcaB04g17776 Brassica carinata HOM05D001498 ORTHO05D092868 9.2e-09 64.3 115 40.0
BcaB03g16624 Brassica carinata HOM05D008414 ORTHO05D095320 1.6e-08 63.5 100 53.0
C04p09850 Brassica napus HOM05D001498 ORTHO05D101798 2.0e-08 63.2 52 65.4
BcaB04g17678 Brassica carinata HOM05D001498 ORTHO05D094760 7.8e-08 61.2 76 47.4
BcaB05g23077 Brassica carinata HOM05D001498 ORTHO05D091436 1.3e-07 60.5 58 55.2
BcaB01g03187 Brassica carinata HOM05D001498 ORTHO05D090608 1.7e-07 60.1 76 47.4
BcaB06g26483 Brassica carinata HOM05D001498 ORTHO05D095599 6.6e-07 58.2 76 46.1
BcaB07g33315 Brassica carinata HOM05D001498 ORTHO05D091495 6.6e-07 58.2 76 44.7
BcaB07g33085 Brassica carinata HOM05D001498 ORTHO05D095625 1.1e-06 57.4 76 44.7
BcaB01g01816 Brassica carinata HOM05D001498 ORTHO05D091844 1.5e-06 57.0 75 49.3
BcaB05g22880 Brassica carinata HOM05D001498 ORTHO05D019959 2.5e-06 56.2 66 54.5
BcaB08g35016 Brassica carinata HOM05D001498 ORTHO05D092631 2.5e-06 56.2 76 42.1
BcaB01g01371 Brassica carinata HOM05D001498 ORTHO05D091381 3.3e-06 55.8 143 42.7
BcaB07g33084 Brassica carinata HOM05D001498 ORTHO05D092207 4.3e-06 55.5 56 55.4
BcaB07g33217 Brassica carinata HOM05D001498 ORTHO05D093085 4.3e-06 55.5 56 55.4
BcaB06g27027 Brassica carinata HOM05D001498 ORTHO05D092574 5.6e-06 55.1 72 45.8
BcaB05g22943 Brassica carinata HOM05D001498 ORTHO05D096110 7.3e-06 54.7 53 54.7
BcaC05g26789 Brassica carinata HOM05D001498 ORTHO05D094205 7.3e-06 54.7 75 48.0
BcaB03g16152 Brassica carinata HOM05D001498 ORTHO05D093112 9.5e-06 54.3 75 46.7
BcaB06g26648 Brassica carinata HOM05D001498 ORTHO05D094209 9.5e-06 54.3 104 41.3
BcaB06g26727 Brassica carinata HOM05D001498 ORTHO05D093134 9.5e-06 54.3 72 47.2
BcaB07g32913 Brassica carinata HOM05D001498 ORTHO05D091922 9.5e-06 54.3 54 51.9
BcaC07g38657 Brassica carinata HOM05D001498 ORTHO05D011506 9.5e-06 54.3 75 45.3
BolC8t49067H Brassica oleracea HOM05D001498 ORTHO05D011506 9.5e-06 54.3 75 45.3


User provided reference genes

Program Settings