Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g35049 Brassica carinata HOM05D001111 ORTHO05D000939 2.8e-81 305.4 178 100.0
BolC7t42552H Brassica oleracea HOM05D001111 ORTHO05D000939 5.4e-69 264.6 201 84.1
Sp1g21110 Schrenkiella parvula HOM05D001111 ORTHO05D000939 1.5e-42 176.8 204 56.4
BraA09t39602Z Brassica rapa HOM05D001111 ORTHO05D000939 2.9e-38 162.5 204 60.8
Thhalv10008273m.g Eutrema salsugineum HOM05D001111 ORTHO05D000939 2.5e-37 159.5 202 53.0
C05p22910 Brassica napus HOM05D001111 ORTHO05D000939 4.2e-37 158.7 206 60.7
A09p41100 Brassica napus HOM05D001111 ORTHO05D000939 1.0e-35 154.1 204 60.3
BcaB07g32354 Brassica carinata HOM05D001111 ORTHO05D000939 2.3e-35 152.9 206 53.9
BcaNung06891 Brassica carinata HOM05D001111 ORTHO05D000939 9.7e-34 147.5 204 59.3
BolC5t30991H Brassica oleracea HOM05D001111 ORTHO05D000939 9.7e-34 147.5 204 59.3
Aa31LG7G7610 Aethionema arabicum HOM05D001111 ORTHO05D000939 1.3e-33 147.1 205 50.2
CARHR024110 Cardamine hirsuta HOM05D001111 ORTHO05D000939 1.3e-30 137.1 204 54.9
AL1G37460 Arabidopsis lyrata HOM05D001111 ORTHO05D000939 2.9e-30 136.0 205 57.1
AT1G23710 Arabidopsis thaliana HOM05D001111 ORTHO05D000939 4.2e-29 132.1 205 55.6
Carub.0001s2323 Capsella rubella HOM05D001111 ORTHO05D000939 7.2e-29 131.3 197 56.3
C07p20320 Brassica napus HOM05D001111 ORTHO05D000939 2.1e-28 129.8 140 56.4
C02p27600 Brassica napus HOM05D001111 ORTHO05D000939 3.6e-20 102.4 179 38.5
AL2G29790 Arabidopsis lyrata HOM05D001111 ORTHO05D000939 6.1e-20 101.7 188 38.3
Thhalv10018979m.g Eutrema salsugineum HOM05D001111 ORTHO05D000939 8.8e-19 97.8 193 37.8
Sp5g25500 Schrenkiella parvula HOM05D001111 ORTHO05D000939 8.8e-19 97.8 189 37.0
A07p36790 Brassica napus HOM05D001111 ORTHO05D000939 1.1e-18 97.4 181 36.5
BcaB03g14801 Brassica carinata HOM05D001111 ORTHO05D000939 1.5e-18 97.1 181 36.5
C06p44280 Brassica napus HOM05D001111 ORTHO05D000939 1.5e-18 97.1 181 36.5
BraA07t31246Z Brassica rapa HOM05D001111 ORTHO05D000939 1.5e-18 97.1 181 36.5
AT1G70420 Arabidopsis thaliana HOM05D001111 ORTHO05D000939 2.0e-18 96.7 193 40.9
A02p16510 Brassica napus HOM05D001111 ORTHO05D000939 2.6e-18 96.3 180 37.8
BraA02t06709Z Brassica rapa HOM05D001111 ORTHO05D000939 2.6e-18 96.3 180 37.8
BcaB05g24567 Brassica carinata HOM05D001111 ORTHO05D000939 4.4e-18 95.5 182 43.4
BolC6t39498H Brassica oleracea HOM05D001111 ORTHO05D000939 4.4e-18 95.5 198 36.4
BcaC08g46484 Brassica carinata HOM05D001111 ORTHO05D000939 7.4e-18 94.7 190 37.4
BolC2t08816H Brassica oleracea HOM05D001111 ORTHO05D000939 7.4e-18 94.7 180 40.0
BcaC03g15182 Brassica carinata HOM05D001111 ORTHO05D000939 9.7e-18 94.4 180 37.8
Carub.0002s1711 Capsella rubella HOM05D001111 ORTHO05D000939 3.7e-17 92.4 189 46.6
Duzib251G0551 Durio zibethinus HOM05D001111 ORTHO05D000939 1.8e-16 90.1 199 34.7
Thecc.02G251000 Theobroma cacao HOM05D001111 ORTHO05D000939 1.8e-16 90.1 191 37.2
THA.LOC104822146 Tarenaya hassleriana HOM05D001111 ORTHO05D000939 3.1e-16 89.4 183 37.2
Duzib268G1217 Durio zibethinus HOM05D001111 ORTHO05D000939 5.9e-15 85.1 196 33.2
THA.LOC104824695 Tarenaya hassleriana HOM05D001111 ORTHO05D000939 1.3e-14 84.0 185 37.8
CARHR063590 Cardamine hirsuta HOM05D001111 ORTHO05D000939 1.4e-13 80.5 197 43.1
FAN22G0614 Fragaria x ananassa HOM05D001111 ORTHO05D000939 7.2e-13 78.2 188 33.5
CiPaw.06G071600 Carya illinoinensis HOM05D001111 ORTHO05D000939 2.7e-12 76.3 199 34.7
FvH4_4g34370 Fragaria vesca HOM05D001111 ORTHO05D000939 6.1e-12 75.1 188 32.4
FAN12G3240 Fragaria x ananassa HOM05D001111 ORTHO05D000939 6.1e-12 75.1 188 32.4
TWI36G1740 Tripterygium wilfordii HOM05D001111 ORTHO05D000939 6.1e-12 75.1 200 33.5
Gohir.A03G139100 Gossypium hirsutum HOM05D001111 ORTHO05D000939 1.0e-11 74.3 203 36.9
Gorai.005G182000 Gossypium raimondii HOM05D001111 ORTHO05D000939 1.0e-11 74.3 199 33.2
Gohir.D02G162000 Gossypium hirsutum HOM05D001111 ORTHO05D000939 1.8e-11 73.6 199 37.2
FAN07G0616 Fragaria x ananassa HOM05D001111 ORTHO05D000939 3.0e-11 72.8 188 32.4
FAN17G1475 Fragaria x ananassa HOM05D001111 ORTHO05D000939 3.0e-11 72.8 191 32.5
Migut.L01424 Erythranthe guttata HOM05D001111 ORTHO05D000939 3.9e-11 72.4 107 40.2
Cpa.g.sc69.47 Carica papaya HOM05D001111 ORTHO05D000939 5.2e-11 72.0 111 39.6
Hma1.2p1_0536F.1_g174000 Hydrangea macrophylla HOM05D001111 ORTHO05D000939 2.6e-10 69.7 215 37.7
QL03p060170 Quercus lobata HOM05D001111 ORTHO05D000939 2.6e-10 69.7 114 39.5
TWI18G0496 Tripterygium wilfordii HOM05D001111 ORTHO05D000939 4.4e-10 68.9 195 34.9
C07p20310 Brassica napus HOM05D001111 ORTHO05D000939 5.7e-10 68.6 41 87.8
CiPaw.05G151600 Carya illinoinensis HOM05D001111 ORTHO05D000939 7.4e-10 68.2 203 32.0
Ciclev10032350m.g Citrus clementina HOM05D001111 ORTHO05D000939 9.7e-10 67.8 106 36.8
Manes.12G028200 Manihot esculenta HOM05D001111 ORTHO05D000939 1.3e-09 67.4 195 31.8
Atru.chr11.2037 Acer truncatum HOM05D001111 ORTHO05D000939 3.7e-09 65.9 111 40.5
MD13G1092700 Malus domestica HOM05D001111 ORTHO05D000939 4.8e-09 65.5 188 31.9
Gohir.A04G135400 Gossypium hirsutum HOM05D001111 ORTHO05D000939 1.4e-08 63.9 188 30.3
Oeu037699.1 Olea europaea HOM05D001111 ORTHO05D000939 1.8e-08 63.5 177 26.6
CANSAT01G0717 Cannabis sativa HOM05D001111 ORTHO05D000939 2.4e-08 63.2 203 32.5
MBI16_g32208_MAGBIO Magnolia biondii HOM05D001111 ORTHO05D000939 2.4e-08 63.2 192 30.2
Migut.H00111 Erythranthe guttata HOM05D001111 ORTHO05D000939 4.1e-08 62.4 187 34.2
Prupe.1G253100 Prunus persica HOM05D001111 ORTHO05D000939 4.1e-08 62.4 193 31.1
BcaB03g14139 Brassica carinata HOM05D001111 ORTHO05D000939 5.3e-08 62.0 124 54.8
Gorai.012G171600 Gossypium raimondii HOM05D001111 ORTHO05D000939 5.3e-08 62.0 166 30.7
Dinv24843 Davidia involucrata HOM05D001111 ORTHO05D000939 7.0e-08 61.6 196 29.1
Gohir.D04G178500 Gossypium hirsutum HOM05D001111 ORTHO05D000939 7.0e-08 61.6 170 32.4
Nn4g22768 Nelumbo nucifera HOM05D001111 ORTHO05D000939 7.0e-08 61.6 202 34.7
Thecc.04G010500 Theobroma cacao HOM05D001111 ORTHO05D000939 7.0e-08 61.6 184 29.9
Ah.02g110500 Amaranthus hybridus HOM05D001111 ORTHO05D000939 1.2e-07 60.8 85 42.4
TAR629G2362 Trochodendron aralioides HOM05D001111 ORTHO05D000939 1.6e-07 60.5 199 31.7
MD16G1093500 Malus domestica HOM05D001111 ORTHO05D000939 2.0e-07 60.1 195 28.7
Dinv15287 Davidia involucrata HOM05D001111 ORTHO05D000939 2.6e-07 59.7 94 37.2
Duzib187G0831 Durio zibethinus HOM05D001111 ORTHO05D000939 2.6e-07 59.7 182 30.2
Oeu037698.1 Olea europaea HOM05D001111 ORTHO05D000939 2.6e-07 59.7 177 24.9
RcHm_v2.0_Chr4g0443781 Rosa chinensis HOM05D001111 ORTHO05D000939 4.5e-07 58.9 193 34.7
Sed0011422 Sechium edule HOM05D001111 ORTHO05D000939 5.9e-07 58.5 165 29.1
Aqoxy3G02945 Aquilegia oxysepala HOM05D001111 ORTHO05D000939 7.7e-07 58.2 199 29.6
Atru.chr6.2310 Acer truncatum HOM05D001111 ORTHO05D000939 1.3e-06 57.4 170 29.4
CiPaw.03G039000 Carya illinoinensis HOM05D001111 ORTHO05D000939 1.3e-06 57.4 192 27.6
Duzib147G1636 Durio zibethinus HOM05D001111 ORTHO05D000939 1.3e-06 57.4 182 30.2
PGR119G0161 Punica granatum HOM05D001111 ORTHO05D000939 1.3e-06 57.4 198 30.8
PGSC0003DMG400000492 Solanum tuberosum HOM05D001111 ORTHO05D000939 2.2e-06 56.6 181 27.6
Oeu043052.2 Olea europaea HOM05D001111 ORTHO05D000939 2.9e-06 56.2 173 28.9
Oeu054059.1 Olea europaea HOM05D001111 ORTHO05D000939 2.9e-06 56.2 101 33.7
Manes.13G029800 Manihot esculenta HOM05D001111 ORTHO05D000939 3.8e-06 55.8 199 29.1
MBI10_g14555_MAGBIO Magnolia biondii HOM05D001111 ORTHO05D000939 6.5e-06 55.1 181 27.6
TAR622G0132 Trochodendron aralioides HOM05D001111 ORTHO05D000939 6.5e-06 55.1 196 29.6
Lalb_Chr05g0216861 Lupinus albus HOM05D001111 ORTHO05D000939 8.5e-06 54.7 182 25.3
TAR371G1086 Trochodendron aralioides HOM05D001111 ORTHO05D000939 8.5e-06 54.7 201 29.9


User provided reference genes

Program Settings