Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g34859 Brassica carinata HOM05D008816 ORTHO05D011113 3.6e-26 120.9 66 100.0
C07p22160 Brassica napus HOM05D008816 ORTHO05D011113 3.6e-26 120.9 66 100.0
BolC7t42783H Brassica oleracea HOM05D008816 ORTHO05D011113 3.6e-26 120.9 66 100.0
A07p15090 Brassica napus HOM05D008816 ORTHO05D011113 3.7e-23 110.9 70 90.0
BraA07t29250Z Brassica rapa HOM05D008816 ORTHO05D011113 3.7e-23 110.9 70 90.0
BcaB03g14265 Brassica carinata HOM05D008816 ORTHO05D011113 5.4e-22 107.1 70 85.7
Sp1g19050 Schrenkiella parvula HOM05D008816 ORTHO05D011113 1.5e-16 89.0 76 72.4
Carub.0001s2095 Capsella rubella HOM05D008816 ORTHO05D011113 2.0e-16 88.6 66 77.3
A06p17580 Brassica napus HOM05D008816 ORTHO05D011113 2.6e-16 88.2 68 73.5
BraA06t24853Z Brassica rapa HOM05D008816 ORTHO05D011113 2.6e-16 88.2 68 73.5
BcaC05g26064 Brassica carinata HOM05D008816 ORTHO05D011113 4.4e-16 87.4 68 73.5
C05p20480 Brassica napus HOM05D008816 ORTHO05D011113 4.4e-16 87.4 68 73.5
BolC5t30746H Brassica oleracea HOM05D008816 ORTHO05D011113 4.4e-16 87.4 68 73.5
Sp1g19060 Schrenkiella parvula HOM05D008816 ORTHO05D011113 9.8e-16 86.3 71 73.2
A06p17570 Brassica napus HOM05D008816 ORTHO05D011113 1.7e-15 85.5 74 73.0
BraA06t24852Z Brassica rapa HOM05D008816 ORTHO05D011113 1.7e-15 85.5 74 73.0
BcaB07g32150 Brassica carinata HOM05D008816 ORTHO05D011113 2.2e-15 85.1 68 72.1
AL1G34670 Arabidopsis lyrata HOM05D008816 ORTHO05D011113 2.8e-15 84.7 67 76.1
BraA07t29249Z Brassica rapa HOM05D008816 ORTHO05D011113 3.7e-15 84.3 68 73.5
AL1G34680 Arabidopsis lyrata HOM05D008816 ORTHO05D011113 6.3e-15 83.6 68 73.5
BcaB05g22551 Brassica carinata HOM05D008816 ORTHO05D011113 1.4e-14 82.4 71 73.2
C08p20880 Brassica napus HOM05D008816 ORTHO05D011113 2.4e-14 81.6 69 69.6
BolC8t49726H Brassica oleracea HOM05D008816 ORTHO05D011113 2.4e-14 81.6 69 69.6
A07p15070 Brassica napus HOM05D008816 ORTHO05D011113 4.1e-14 80.9 68 72.1
BraA08t34824Z Brassica rapa HOM05D008816 ORTHO05D011113 4.1e-14 80.9 71 67.6
BcaB07g32149 Brassica carinata HOM05D008816 ORTHO05D011113 5.4e-14 80.5 71 71.8
BraA08t34825Z Brassica rapa HOM05D008816 ORTHO05D011113 7.0e-14 80.1 71 67.6
BcaC05g26063 Brassica carinata HOM05D008816 ORTHO05D032745 1.2e-13 79.3 57 80.7
C05p20460 Brassica napus HOM05D008816 ORTHO05D032745 1.2e-13 79.3 57 80.7
C07p22060 Brassica napus HOM05D008816 ORTHO05D011113 1.2e-13 79.3 70 68.6
C08p20900 Brassica napus HOM05D008816 ORTHO05D011113 1.2e-13 79.3 71 66.2
BolC8t49728H Brassica oleracea HOM05D008816 ORTHO05D011113 1.2e-13 79.3 71 66.2
BcaB03g12813 Brassica carinata HOM05D008816 ORTHO05D011113 1.6e-13 79.0 71 66.2
BcaC07g39105 Brassica carinata HOM05D008816 ORTHO05D011113 3.5e-13 77.8 71 66.2
Carub.0001s2096 Capsella rubella HOM05D008816 ORTHO05D011113 3.5e-13 77.8 71 70.4
BolC5t30739H Brassica oleracea HOM05D008816 ORTHO05D032745 5.9e-13 77.0 61 77.0
A08p28930 Brassica napus HOM05D000987 ORTHO05D006530 1.0e-12 76.3 62 71.0
BcaC06g34895 Brassica carinata HOM05D008816 ORTHO05D011113 2.3e-12 75.1 70 65.7
BolC7t42736H Brassica oleracea HOM05D008816 ORTHO05D011113 2.3e-12 75.1 70 65.7
BcaB03g14263 Brassica carinata HOM05D008816 ORTHO05D011113 1.9e-11 72.0 69 65.2
CARHR021890 Cardamine hirsuta HOM05D008816 ORTHO05D011113 3.3e-11 71.2 70 65.7
BcaB05g22554 Brassica carinata HOM05D008816 ORTHO05D011113 4.7e-10 67.4 50 76.0


User provided reference genes

Program Settings