Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g34704 Brassica carinata HOM05D007694 ORTHO05D039975 2.3e-285 984.9 512 100.0
C03p26050 Brassica napus HOM05D007694 ORTHO05D103481 5.2e-258 894.0 499 93.4
C07p15690 Brassica napus HOM05D007694 ORTHO05D039975 2.4e-247 858.6 451 98.7
BolC3t15113H Brassica oleracea HOM05D007694 ORTHO05D019925 1.2e-140 504.2 345 76.2
C03p27330 Brassica napus HOM05D007694 ORTHO05D019925 1.1e-138 497.7 345 75.4
C06p41010 Brassica napus HOM05D007694 ORTHO05D019925 1.2e-132 477.6 436 61.7
BcaNung06462 Brassica carinata HOM05D007694 ORTHO05D090500 2.1e-129 466.8 248 99.2
BolC6t38748H Brassica oleracea HOM05D007694 ORTHO05D040580 3.3e-119 433.0 289 79.2
BcaC08g46337 Brassica carinata HOM05D007694 ORTHO05D019925 5.6e-119 432.2 338 67.8
C06p36270 Brassica napus HOM05D007694 ORTHO05D040580 2.1e-118 430.3 289 78.9
C03p37800 Brassica napus HOM05D007694 ORTHO05D018628 3.4e-108 396.4 208 98.6
A06p28320 Brassica napus HOM05D007694 ORTHO05D019925 2.3e-104 383.6 274 73.7
BraA06t25774Z Brassica rapa HOM05D007694 ORTHO05D019925 1.5e-103 380.9 274 73.7
C09p74970 Brassica napus HOM05D007694 ORTHO05D018628 2.5e-103 380.2 198 98.0
BolC7t45648H Brassica oleracea HOM05D007694 ORTHO05D018628 7.2e-90 335.5 196 88.3
BcaB08g34287 Brassica carinata HOM05D007694 ORTHO05D018628 1.0e-88 331.6 174 100.0
C04p62200 Brassica napus HOM05D007694 ORTHO05D032824 1.4e-88 331.3 220 78.2
BolC4t27699H Brassica oleracea HOM05D007694 ORTHO05D032824 1.4e-88 331.3 220 78.2
BcaC02g07899 Brassica carinata HOM05D007694 ORTHO05D032824 6.7e-88 328.9 220 77.7
BolC1t04613H Brassica oleracea HOM05D007694 ORTHO05D032021 6.5e-75 285.8 232 67.7
C03p03780 Brassica napus HOM05D007694 ORTHO05D032021 1.8e-72 277.7 232 66.4
BcaC08g45840 Brassica carinata HOM05D007694 ORTHO05D094686 1.2e-71 275.0 194 73.7
A09p11270 Brassica napus HOM05D007694 ORTHO05D101493 4.5e-68 263.1 188 77.7
C05p39780 Brassica napus HOM05D007694 ORTHO05D018628 5.0e-67 259.6 168 83.9
BolC5t32721H Brassica oleracea HOM05D007694 ORTHO05D018628 8.6e-67 258.8 162 85.8
BolC6t39327H Brassica oleracea HOM05D007694 ORTHO05D019925 6.8e-64 249.2 257 56.0
A01p18710 Brassica napus HOM05D007694 ORTHO05D018628 2.8e-57 227.3 138 89.1
BraA09t39372Z Brassica rapa HOM05D007694 ORTHO05D018628 5.8e-47 193.0 132 79.5
BcaNung06212 Brassica carinata HOM05D007694 ORTHO05D032021 2.9e-46 190.7 152 69.1
C04p59470 Brassica napus HOM05D007694 ORTHO05D041000 1.2e-44 185.3 193 56.5
BolC4t27454H Brassica oleracea HOM05D007694 ORTHO05D041000 1.2e-44 185.3 193 56.5
C02p60690 Brassica napus HOM05D007694 ORTHO05D017623 2.7e-44 184.1 204 54.9
BolC4t23101H Brassica oleracea HOM05D007694 ORTHO05D017623 3.5e-44 183.7 204 53.9
BolC6t39117H Brassica oleracea HOM05D007694 ORTHO05D040657 7.3e-42 176.0 174 58.0
C04p68250 Brassica napus HOM05D007694 ORTHO05D017623 1.1e-40 172.2 199 54.8
C09p20580 Brassica napus HOM05D007694 ORTHO05D098549 1.1e-40 172.2 126 71.4
BraA03t11220Z Brassica rapa HOM05D007694 ORTHO05D017623 4.0e-40 170.2 200 53.5
C01p17800 Brassica napus HOM05D007694 ORTHO05D017623 1.2e-39 168.7 204 52.0
BolC1t01714H Brassica oleracea HOM05D007694 ORTHO05D017623 1.2e-39 168.7 204 52.0
BcaC08g43501 Brassica carinata HOM05D007694 ORTHO05D032221 3.4e-39 167.2 169 56.8
BcaC05g25793 Brassica carinata HOM05D007694 ORTHO05D092144 7.5e-39 166.0 129 70.5
C04p52480 Brassica napus HOM05D007694 ORTHO05D017623 4.6e-36 156.8 175 54.3
C06p08850 Brassica napus HOM05D007694 ORTHO05D032221 1.5e-34 151.8 151 58.9
BolC6t35963H Brassica oleracea HOM05D007694 ORTHO05D032221 1.9e-34 151.4 151 58.9
BcaC07g39619 Brassica carinata HOM05D007694 ORTHO05D090536 5.4e-29 133.3 199 46.7
BcaC05g27972 Brassica carinata HOM05D007694 ORTHO05D039545 2.7e-28 131.0 69 92.8
BraA03t14786Z Brassica rapa HOM05D007694 ORTHO05D017623 2.7e-28 131.0 143 53.8
C09p47680 Brassica napus HOM05D007694 ORTHO05D023849 1.3e-27 128.6 190 42.6
C02p22430 Brassica napus HOM05D007694 ORTHO05D023849 1.7e-27 128.3 190 42.6
C05p07860 Brassica napus HOM05D007694 ORTHO05D023849 5.1e-27 126.7 190 43.7
C02p29800 Brassica napus HOM05D007694 ORTHO05D097335 1.9e-26 124.8 190 41.6
C05p39740 Brassica napus HOM05D007694 ORTHO05D039545 5.6e-26 123.2 77 83.1
BcaC09g50485 Brassica carinata HOM05D007694 ORTHO05D039168 8.1e-25 119.4 216 43.5
BcaB06g25426 Brassica carinata HOM05D007694 ORTHO05D017623 1.8e-24 118.2 169 47.3
BcaB05g23971 Brassica carinata HOM05D007694 ORTHO05D092126 4.0e-24 117.1 78 71.8
BcaB03g13247 Brassica carinata HOM05D007694 ORTHO05D007622 1.2e-20 105.5 198 36.9
C07p27460 Brassica napus HOM05D007694 ORTHO05D019969 7.8e-20 102.8 89 62.9
BcaB02g07104 Brassica carinata HOM05D007694 ORTHO05D093325 6.6e-19 99.8 208 39.4
C03p84280 Brassica napus HOM05D007694 ORTHO05D019969 6.6e-19 99.8 89 61.8
BolC7t43276H Brassica oleracea HOM05D007694 ORTHO05D019969 6.6e-19 99.8 89 61.8
C03p13860 Brassica napus HOM05D007694 ORTHO05D019969 1.5e-18 98.6 89 61.8
A09p11800 Brassica napus HOM05D010239 ORTHO05D021857 2.5e-18 97.8 202 36.1
BcaC03g17842 Brassica carinata HOM05D010239 ORTHO05D021857 4.3e-18 97.1 183 38.8
C03p14610 Brassica napus HOM05D007694 ORTHO05D019969 5.6e-18 96.7 89 60.7
BcaC04g22328 Brassica carinata HOM05D000013 ORTHO05D000011 7.3e-18 96.3 58 77.6
C01p52730 Brassica napus HOM05D009681 ORTHO05D013235 1.3e-17 95.5 164 40.9
BcaC02g10860 Brassica carinata HOM05D009681 ORTHO05D013235 1.6e-17 95.1 164 40.2
C09p20570 Brassica napus HOM05D007694 ORTHO05D040657 1.6e-17 95.1 61 77.0
BcaC05g28459 Brassica carinata HOM05D007694 ORTHO05D092653 2.1e-17 94.7 68 67.6
C02p58810 Brassica napus HOM05D010239 ORTHO05D021857 2.1e-17 94.7 183 38.3
BcaB03g15520 Brassica carinata HOM05D009681 ORTHO05D013235 4.8e-17 93.6 190 37.4
BcaC05g29803 Brassica carinata HOM05D007694 ORTHO05D019969 4.8e-17 93.6 107 56.1
BcaB01g05936 Brassica carinata HOM05D009681 ORTHO05D013235 1.1e-16 92.4 149 43.6
C02p01760 Brassica napus HOM05D010239 ORTHO05D024417 1.4e-16 92.0 197 38.6
BcaC01g04122 Brassica carinata HOM05D009681 ORTHO05D013235 1.2e-15 89.0 107 52.3
BcaC01g04928 Brassica carinata HOM05D010239 ORTHO05D024417 2.6e-15 87.8 161 39.1
C03p32000 Brassica napus HOM05D010239 ORTHO05D024417 2.6e-15 87.8 161 39.1
BcaC04g22727 Brassica carinata HOM05D009681 ORTHO05D013235 4.5e-15 87.0 163 36.8
BcaB04g18319 Brassica carinata HOM05D007694 ORTHO05D091879 5.8e-15 86.7 106 50.0
BcaC01g03734 Brassica carinata HOM05D009681 ORTHO05D013235 5.8e-15 86.7 154 40.3
A08p01330 Brassica napus HOM05D010239 ORTHO05D021857 5.8e-15 86.7 99 51.5
C03p14360 Brassica napus HOM05D009681 ORTHO05D013235 5.8e-15 86.7 150 39.3
BcaC03g12959 Brassica carinata HOM05D010239 ORTHO05D090479 1.7e-14 85.1 99 52.5
BolC2t12312H Brassica oleracea HOM05D010239 ORTHO05D021857 2.2e-14 84.7 155 38.7
BolC5t29133H Brassica oleracea HOM05D010239 ORTHO05D024417 2.9e-14 84.3 154 40.9
C03p00010 Brassica napus HOM05D010239 ORTHO05D024417 1.1e-13 82.4 99 51.5
BcaB08g35388 Brassica carinata HOM05D007694 ORTHO05D003268 1.9e-13 81.6 103 49.5
BcaC03g18291 Brassica carinata HOM05D010239 ORTHO05D090330 1.9e-13 81.6 167 39.5
C05p31500 Brassica napus HOM05D007694 ORTHO05D039168 2.4e-13 81.3 99 49.5
BolC3t15543H Brassica oleracea HOM05D010239 ORTHO05D104682 2.4e-13 81.3 106 48.1
BcaC09g51023 Brassica carinata HOM05D000022 ORTHO05D000071 3.5e-12 77.4 101 48.5
BcaC04g22991 Brassica carinata HOM05D007694 ORTHO05D094549 6.0e-12 76.6 90 47.8
BcaC05g29027 Brassica carinata HOM05D010239 ORTHO05D005077 1.3e-11 75.5 99 48.5
BraA08t32183Z Brassica rapa HOM05D010239 ORTHO05D021857 3.9e-11 73.9 81 53.1
BcaNung03237 Brassica carinata HOM05D007694 ORTHO05D092031 6.7e-11 73.2 133 42.1
C09p67420 Brassica napus HOM05D010239 ORTHO05D032921 6.7e-11 73.2 78 56.4
BolC9t59504H Brassica oleracea HOM05D010239 ORTHO05D032921 6.7e-11 73.2 78 56.4
BraA09t40010Z Brassica rapa HOM05D009681 ORTHO05D013235 8.7e-11 72.8 129 42.6
A02p13980 Brassica napus HOM05D007694 ORTHO05D098099 2.5e-10 71.2 56 66.1
A09p45490 Brassica napus HOM05D009681 ORTHO05D013235 4.3e-10 70.5 129 41.9
C03p44900 Brassica napus HOM05D009681 ORTHO05D013235 5.6e-10 70.1 136 37.5
BcaB03g12442 Brassica carinata HOM05D003157 ORTHO05D004447 3.7e-09 67.4 78 52.6
BcaB04g17819 Brassica carinata HOM05D000471 ORTHO05D000199 1.1e-08 65.9 82 50.0
A04p22240 Brassica napus HOM05D009832 ORTHO05D027185 1.8e-08 65.1 49 65.3
BraA04t17776Z Brassica rapa HOM05D009832 ORTHO05D027185 1.8e-08 65.1 49 65.3
BcaC03g14420 Brassica carinata HOM05D030131 ORTHO05D021678 2.4e-08 64.7 34 85.3
BcaC05g26461 Brassica carinata HOM05D007694 ORTHO05D090717 4.0e-08 63.9 89 44.9
C09p15890 Brassica napus HOM05D009681 ORTHO05D013235 4.0e-08 63.9 97 44.3
BcaC07g36849 Brassica carinata HOM05D007694 ORTHO05D019980 5.3e-08 63.5 255 30.6
C07p38370 Brassica napus HOM05D010036 ORTHO05D039782 1.5e-07 62.0 178 33.7
BcaC02g07312 Brassica carinata HOM05D007694 ORTHO05D019980 4.5e-07 60.5 85 49.4
C02p03040 Brassica napus HOM05D008960 ORTHO05D019923 2.2e-06 58.2 52 57.7
BraA10t42359Z Brassica rapa HOM05D008960 ORTHO05D019923 2.9e-06 57.8 58 56.9
BolC4t28328H Brassica oleracea HOM05D007694 ORTHO05D040685 4.9e-06 57.0 52 57.7


User provided reference genes

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