Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g34616 Brassica carinata HOM05D001350 ORTHO05D001091 2.1e-64 248.8 122 100.0
BolC7t43625H Brassica oleracea HOM05D001350 ORTHO05D001091 1.8e-55 219.2 121 89.3
BolC2t11167H Brassica oleracea HOM05D001350 ORTHO05D001091 4.1e-44 181.4 100 89.0
BolC8t48512H Brassica oleracea HOM05D000003 ORTHO05D001091 3.6e-40 168.3 120 72.5
BcaC06g36673 Brassica carinata HOM05D000003 ORTHO05D001091 3.4e-38 161.8 113 69.0
BcaB02g10187 Brassica carinata HOM05D001350 ORTHO05D001091 1.7e-37 159.5 112 70.5
BcaC02g11113 Brassica carinata HOM05D001350 ORTHO05D001091 1.1e-33 146.7 113 64.6
BcaC09g48779 Brassica carinata HOM05D001350 ORTHO05D001091 1.9e-33 146.0 89 78.7
BcaC03g16655 Brassica carinata HOM05D001350 ORTHO05D001091 1.6e-32 142.9 85 78.8
BolC9t53650H Brassica oleracea HOM05D000003 ORTHO05D001091 5.8e-30 134.4 114 58.8
BcaC03g17160 Brassica carinata HOM05D001350 ORTHO05D001091 2.2e-29 132.5 75 85.3
BcaB05g24532 Brassica carinata HOM05D000003 ORTHO05D001091 3.1e-23 112.1 121 50.4
BcaC07g39692 Brassica carinata HOM05D000003 ORTHO05D001091 4.4e-22 108.2 120 50.0
C05p17500 Brassica napus HOM05D001350 ORTHO05D001091 2.7e-19 99.0 121 47.1
BcaC09g51820 Brassica carinata HOM05D001350 ORTHO05D001091 3.5e-19 98.6 120 43.3
BcaC08g42980 Brassica carinata HOM05D001350 ORTHO05D001091 1.3e-18 96.7 119 41.2
BcaC03g15006 Brassica carinata HOM05D000003 ORTHO05D001091 2.3e-18 95.9 100 52.0
BcaC07g37262 Brassica carinata HOM05D001350 ORTHO05D001091 6.6e-18 94.4 121 44.6
BolC1t04094H Brassica oleracea HOM05D001350 ORTHO05D001091 1.3e-16 90.1 126 42.1
BcaB01g01759 Brassica carinata HOM05D001350 ORTHO05D001091 1.6e-16 89.7 120 42.5
BcaB03g16680 Brassica carinata HOM05D001350 ORTHO05D001091 1.6e-16 89.7 121 43.0
BolC3t19138H Brassica oleracea HOM05D001350 ORTHO05D001091 3.6e-16 88.6 121 44.6
BcaC02g09840 Brassica carinata HOM05D001350 ORTHO05D001091 1.4e-15 86.7 132 38.6
BraA02t07544Z Brassica rapa HOM05D001350 ORTHO05D001091 2.4e-15 85.9 80 50.0
BcaC09g49092 Brassica carinata HOM05D001350 ORTHO05D001091 5.3e-15 84.7 78 52.6
BraA03t14144Z Brassica rapa HOM05D001350 ORTHO05D001091 5.3e-15 84.7 60 65.0
BraA09t40337Z Brassica rapa HOM05D001350 ORTHO05D001091 5.3e-15 84.7 60 66.7
BcaC07g37777 Brassica carinata HOM05D001350 ORTHO05D001091 1.2e-14 83.6 81 51.9
BolC3t18677H Brassica oleracea HOM05D001350 ORTHO05D001091 1.5e-14 83.2 60 66.7
BcaB03g16442 Brassica carinata HOM05D001350 ORTHO05D001091 2.0e-14 82.8 78 53.8
BolC4t24823H Brassica oleracea HOM05D001350 ORTHO05D001091 2.0e-14 82.8 128 35.9
BraA07t27950Z Brassica rapa HOM05D001350 ORTHO05D001091 2.0e-14 82.8 60 63.3
BolC8t47716H Brassica oleracea HOM05D001350 ORTHO05D001091 2.6e-14 82.4 81 53.1
BcaB08g36771 Brassica carinata HOM05D001350 ORTHO05D001091 9.9e-14 80.5 78 52.6
BolC3t19233H Brassica oleracea HOM05D001350 ORTHO05D001091 9.9e-14 80.5 60 60.0
BolC5t32800H Brassica oleracea HOM05D001350 ORTHO05D001091 1.3e-13 80.1 60 65.0
BraA01t02271Z Brassica rapa HOM05D001350 ORTHO05D001091 1.3e-13 80.1 60 60.0
BcaC04g23246 Brassica carinata HOM05D000003 ORTHO05D001091 3.8e-13 78.6 96 45.8
BcaB04g17307 Brassica carinata HOM05D001350 ORTHO05D001091 4.9e-13 78.2 78 51.3
BcaC03g14873 Brassica carinata HOM05D001350 ORTHO05D001091 4.9e-13 78.2 74 51.4
BcaB07g33232 Brassica carinata HOM05D000003 ORTHO05D001091 8.4e-13 77.4 56 64.3
BolC2t10697H Brassica oleracea HOM05D001350 ORTHO05D001091 1.4e-12 76.6 117 39.3
BcaB01g02686 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-12 76.3 122 36.9
BolC3t16062H Brassica oleracea HOM05D001350 ORTHO05D001091 1.9e-12 76.3 52 65.4
BolC8t48745H Brassica oleracea HOM05D001350 ORTHO05D001091 4.2e-12 75.1 124 36.3
BcaB02g09955 Brassica carinata HOM05D001350 ORTHO05D001091 5.4e-12 74.7 85 47.1
BcaC05g29655 Brassica carinata HOM05D000496 ORTHO05D000411 5.4e-12 74.7 122 35.2
BcaC01g02077 Brassica carinata HOM05D001350 ORTHO05D001091 7.1e-12 74.3 78 51.3
BcaC01g05965 Brassica carinata HOM05D001350 ORTHO05D001091 1.2e-11 73.6 127 36.2
BcaC04g23025 Brassica carinata HOM05D001350 ORTHO05D001091 1.2e-11 73.6 78 48.7
BolC2t08930H Brassica oleracea HOM05D000048 ORTHO05D000207 2.1e-11 72.8 124 35.5
BolC5t33349H Brassica oleracea HOM05D001350 ORTHO05D001091 4.6e-11 71.6 69 49.3
Thhalv10009844m.g Eutrema salsugineum HOM05D001350 ORTHO05D001091 6.0e-11 71.2 129 39.5
Sp7g09760 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.0e-10 70.5 125 36.0
BolC5t29613H Brassica oleracea HOM05D001350 ORTHO05D001091 2.3e-10 69.3 120 35.8
BolC9t57914H Brassica oleracea HOM05D001350 ORTHO05D001091 3.9e-10 68.6 120 35.8
BraA05t21420Z Brassica rapa HOM05D001350 ORTHO05D001091 5.1e-10 68.2 124 34.7
BcaC01g00384 Brassica carinata HOM05D001350 ORTHO05D001091 8.7e-10 67.4 62 56.5
BcaB01g02463 Brassica carinata HOM05D001350 ORTHO05D001091 1.5e-09 66.6 123 34.1
Aa31LG3G3940 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.9e-09 66.2 125 29.6
C09p50940 Brassica napus HOM05D001350 ORTHO05D001091 1.9e-09 66.2 77 42.9
BraA02t08446Z Brassica rapa HOM05D001350 ORTHO05D001091 2.5e-09 65.9 117 36.8
BraA05t19427Z Brassica rapa HOM05D001350 ORTHO05D001091 2.5e-09 65.9 74 45.9
BcaB08g34689 Brassica carinata HOM05D001350 ORTHO05D001091 5.6e-09 64.7 77 42.9
Aa31LG8G11190 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.4e-09 64.3 124 31.5
BraA01t03311Z Brassica rapa HOM05D001350 ORTHO05D001091 7.4e-09 64.3 82 43.9
Sp7g26700 Schrenkiella parvula HOM05D001350 ORTHO05D001091 9.6e-09 63.9 125 31.2
Sp3g29630 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.3e-08 63.5 116 36.2
Sp6g07800 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.3e-08 63.5 113 34.5
BcaC07g42294 Brassica carinata HOM05D001350 ORTHO05D001091 2.8e-08 62.4 119 31.9
BolC1t03684H Brassica oleracea HOM05D001350 ORTHO05D001091 2.8e-08 62.4 81 40.7
Aa31sc56G70 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.1e-08 60.8 121 31.4
BraA03t14268Z Brassica rapa HOM05D001350 ORTHO05D001091 1.1e-07 60.5 120 30.0
C04p20800 Brassica napus HOM05D001350 ORTHO05D001091 1.4e-07 60.1 120 30.0
Aa31sc407G40 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.8e-07 59.7 126 33.3
BolC3t21127H Brassica oleracea HOM05D001350 ORTHO05D001091 2.4e-07 59.3 89 38.2
Sp7g07530 Schrenkiella parvula HOM05D001350 ORTHO05D001091 3.1e-07 58.9 83 37.3
BolC5t30800H Brassica oleracea HOM05D001350 ORTHO05D001091 4.0e-07 58.5 39 71.8
Sp7g05470 Schrenkiella parvula HOM05D001350 ORTHO05D001091 4.0e-07 58.5 104 35.6
Sp7g07740 Schrenkiella parvula HOM05D001350 ORTHO05D001091 4.0e-07 58.5 122 33.6
Sp7g10230 Schrenkiella parvula HOM05D001350 ORTHO05D001091 4.0e-07 58.5 79 38.0
Aa31LG11G9560 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.3e-07 58.2 128 32.8
BraA03t13711Z Brassica rapa HOM05D001350 ORTHO05D001091 6.9e-07 57.8 76 38.2
Carub.0002s0963 Capsella rubella HOM05D001350 ORTHO05D001091 9.0e-07 57.4 119 27.7
BolC5t33811H Brassica oleracea HOM05D001350 ORTHO05D001091 1.2e-06 57.0 76 38.2
Sp6g09390 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.2e-06 57.0 91 35.2
Aa31LG9G15190 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.5e-06 56.6 124 31.5
CARHR102280 Cardamine hirsuta HOM05D001350 ORTHO05D001091 1.5e-06 56.6 89 33.7
C08p10730 Brassica napus HOM05D016235 ORTHO05D001091 2.0e-06 56.2 100 35.0
CARHR049200 Cardamine hirsuta HOM05D001350 ORTHO05D001091 3.4e-06 55.5 130 30.0
Aa31LG3G5890 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.5e-06 55.1 121 27.3
Aa31sc74G100 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.5e-06 55.1 128 29.7
BcaC08g47082 Brassica carinata HOM05D000496 ORTHO05D000411 5.8e-06 54.7 103 35.9
BolC1t03055H Brassica oleracea HOM05D065634 ORTHO05D028336 5.8e-06 54.7 75 41.3
BcaC06g34628 Brassica carinata HOM05D001350 ORTHO05D001091 7.6e-06 54.3 107 31.8
Aa31LG5G21780 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.0e-05 53.9 133 29.3
BolC4t24258H Brassica oleracea HOM05D001350 ORTHO05D001091 1.0e-05 53.9 102 32.4


User provided reference genes

Program Settings