Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g34587 Brassica carinata HOM05D002078 ORTHO05D005680 0.0e+00 1398.3 721 100.0
BcaC06g35685 Brassica carinata HOM05D002078 ORTHO05D005680 1.1e-304 1049.7 786 77.0
BcaC03g14285 Brassica carinata HOM05D002078 ORTHO05D005680 4.6e-300 1034.2 819 73.6
BcaC06g35846 Brassica carinata HOM05D002078 ORTHO05D005680 4.4e-218 761.9 660 66.1
BcaC09g49866 Brassica carinata HOM05D002078 ORTHO05D005680 1.6e-180 637.1 627 59.8
BcaB03g14738 Brassica carinata HOM05D002078 ORTHO05D005680 6.4e-177 625.2 734 52.7
BcaB06g27178 Brassica carinata HOM05D002078 ORTHO05D005680 2.7e-175 619.8 699 54.9
BcaB05g24965 Brassica carinata HOM05D002078 ORTHO05D005680 6.6e-166 588.6 699 51.6
BcaB03g16359 Brassica carinata HOM05D002078 ORTHO05D005680 1.1e-133 481.5 704 47.0
BcaB04g18879 Brassica carinata HOM05D010358 ORTHO05D096235 4.1e-75 287.0 630 37.9
BolC5t31433H Brassica oleracea HOM05D010358 ORTHO05D021654 4.3e-64 250.4 605 34.4
BcaC05g27420 Brassica carinata HOM05D002078 ORTHO05D005680 2.1e-55 221.5 736 29.6
BcaC04g21351 Brassica carinata HOM05D002078 ORTHO05D005680 2.8e-55 221.1 301 41.2
BcaC02g09798 Brassica carinata HOM05D002078 ORTHO05D005680 1.8e-54 218.4 475 34.7
BcaC05g28690 Brassica carinata HOM05D002078 ORTHO05D005680 2.4e-54 218.0 321 38.6
BcaC03g17686 Brassica carinata HOM05D002078 ORTHO05D005680 4.0e-54 217.2 301 41.2
BcaC07g37378 Brassica carinata HOM05D002078 ORTHO05D005680 9.0e-54 216.1 268 45.1
BcaC06g35883 Brassica carinata HOM05D002078 ORTHO05D005680 1.2e-53 215.7 268 41.8
BcaC01g04584 Brassica carinata HOM05D002078 ORTHO05D005680 4.9e-52 210.3 647 29.2
BcaC05g27552 Brassica carinata HOM05D002078 ORTHO05D005680 4.9e-52 210.3 260 44.2
BcaC09g49293 Brassica carinata HOM05D002078 ORTHO05D005680 8.4e-52 209.5 391 35.0
BcaC05g27553 Brassica carinata HOM05D002078 ORTHO05D005680 1.9e-51 208.4 260 44.2
BcaC03g14208 Brassica carinata HOM05D002078 ORTHO05D005680 3.2e-51 207.6 367 35.1
BcaB02g11379 Brassica carinata HOM05D010358 ORTHO05D095238 5.4e-51 206.8 594 34.0
BcaC05g26934 Brassica carinata HOM05D002078 ORTHO05D005680 5.4e-51 206.8 405 35.6
BcaC08g43200 Brassica carinata HOM05D002078 ORTHO05D005680 7.1e-51 206.5 398 35.9
BcaC07g38368 Brassica carinata HOM05D002078 ORTHO05D005680 3.5e-50 204.1 190 54.2
BcaC02g10377 Brassica carinata HOM05D002078 ORTHO05D005680 7.8e-50 203.0 190 54.7
BcaC03g16426 Brassica carinata HOM05D002078 ORTHO05D005680 3.0e-49 201.1 214 50.0
BcaC01g03754 Brassica carinata HOM05D002078 ORTHO05D005680 8.7e-49 199.5 708 28.5
BcaC02g11611 Brassica carinata HOM05D002078 ORTHO05D005680 1.1e-48 199.1 243 42.8
BcaC03g16343 Brassica carinata HOM05D002078 ORTHO05D005680 5.6e-48 196.8 815 27.0
BcaC02g10668 Brassica carinata HOM05D002078 ORTHO05D005680 9.6e-48 196.1 256 42.6
BcaC02g10452 Brassica carinata HOM05D002078 ORTHO05D005680 2.8e-47 194.5 248 45.6
BcaC02g09312 Brassica carinata HOM05D002078 ORTHO05D005680 3.6e-47 194.1 551 30.5
BcaB01g01226 Brassica carinata HOM05D010358 ORTHO05D095329 8.1e-47 193.0 490 33.1
BcaC03g17136 Brassica carinata HOM05D002078 ORTHO05D005680 5.3e-46 190.3 366 33.9
C08p07900 Brassica napus HOM05D002078 ORTHO05D005680 5.3e-46 190.3 291 36.4
BcaC03g16104 Brassica carinata HOM05D002078 ORTHO05D005680 6.9e-46 189.9 339 35.4
BcaC04g19675 Brassica carinata HOM05D002078 ORTHO05D005680 6.9e-46 189.9 195 48.7
BcaC05g27300 Brassica carinata HOM05D002078 ORTHO05D005680 2.6e-45 188.0 230 45.7
BcaC04g20801 Brassica carinata HOM05D002078 ORTHO05D005680 1.7e-44 185.3 250 42.4
BcaB07g33248 Brassica carinata HOM05D010358 ORTHO05D095503 2.9e-44 184.5 361 40.7
BcaB07g33910 Brassica carinata HOM05D002078 ORTHO05D005680 2.9e-44 184.5 378 36.5
BcaC03g16774 Brassica carinata HOM05D002078 ORTHO05D005680 2.9e-44 184.5 248 39.9
BcaB03g15586 Brassica carinata HOM05D002078 ORTHO05D005680 3.8e-44 184.1 273 38.8
BolC8t47641H Brassica oleracea HOM05D002078 ORTHO05D005680 4.9e-44 183.7 215 42.3
BcaC02g10933 Brassica carinata HOM05D002078 ORTHO05D005680 1.1e-43 182.6 176 53.4
BcaC01g01023 Brassica carinata HOM05D002078 ORTHO05D005680 1.4e-43 182.2 330 37.3
BcaC06g35850 Brassica carinata HOM05D002078 ORTHO05D005680 1.4e-43 182.2 203 47.3
BcaC08g43484 Brassica carinata HOM05D002078 ORTHO05D005680 1.6e-42 178.7 267 37.5
BcaC05g26571 Brassica carinata HOM05D002078 ORTHO05D005680 2.7e-42 177.9 205 45.4
BcaC05g26838 Brassica carinata HOM05D010358 ORTHO05D021654 3.5e-42 177.6 542 31.2
BcaC08g42839 Brassica carinata HOM05D002078 ORTHO05D005680 1.3e-41 175.6 226 42.9
BcaC02g09148 Brassica carinata HOM05D002078 ORTHO05D005680 8.7e-41 172.9 256 37.5
BcaC03g17328 Brassica carinata HOM05D002078 ORTHO05D005680 1.5e-40 172.2 467 31.3
BcaC07g37462 Brassica carinata HOM05D002078 ORTHO05D005680 1.9e-40 171.8 257 38.9
BcaC08g44804 Brassica carinata HOM05D002078 ORTHO05D005680 4.3e-40 170.6 261 40.2
BcaC03g15357 Brassica carinata HOM05D002078 ORTHO05D005680 1.3e-39 169.1 242 39.3
BcaC03g16508 Brassica carinata HOM05D002078 ORTHO05D005680 1.3e-39 169.1 184 48.4
BcaC09g49431 Brassica carinata HOM05D002078 ORTHO05D005680 1.6e-39 168.7 260 38.8
BcaC05g27328 Brassica carinata HOM05D002078 ORTHO05D005680 1.4e-38 165.6 237 40.5
BcaC02g10884 Brassica carinata HOM05D002078 ORTHO05D005680 4.0e-38 164.1 456 31.6
BcaC02g11773 Brassica carinata HOM05D002078 ORTHO05D005680 5.3e-38 163.7 250 39.6
BcaC01g02138 Brassica carinata HOM05D002078 ORTHO05D005680 4.5e-37 160.6 216 41.7
BcaC09g50043 Brassica carinata HOM05D002078 ORTHO05D005680 9.9e-37 159.5 133 56.4
BcaB03g16241 Brassica carinata HOM05D010358 ORTHO05D092281 1.4e-35 155.6 231 50.2
BcaC08g44035 Brassica carinata HOM05D002078 ORTHO05D005680 1.4e-35 155.6 195 43.6
BcaC09g49433 Brassica carinata HOM05D002078 ORTHO05D005680 1.9e-35 155.2 216 40.3
BcaC08g42827 Brassica carinata HOM05D002078 ORTHO05D005680 7.1e-35 153.3 761 25.6
BcaC02g10131 Brassica carinata HOM05D002078 ORTHO05D005680 2.1e-34 151.8 212 41.0
BcaC02g10764 Brassica carinata HOM05D002078 ORTHO05D005680 6.0e-34 150.2 614 27.0
BcaC03g16560 Brassica carinata HOM05D002078 ORTHO05D005680 1.3e-33 149.1 234 38.9
BcaC07g37211 Brassica carinata HOM05D002078 ORTHO05D005680 1.3e-33 149.1 257 35.8
BcaC08g43500 Brassica carinata HOM05D002078 ORTHO05D005680 1.3e-33 149.1 157 49.0
BraA08t33314Z Brassica rapa HOM05D002078 ORTHO05D005680 8.7e-33 146.4 113 61.1
BcaC07g37412 Brassica carinata HOM05D002078 ORTHO05D005680 3.3e-32 144.4 253 36.4
BcaB05g23833 Brassica carinata HOM05D010358 ORTHO05D005680 4.3e-32 144.1 280 42.5
BcaC09g49271 Brassica carinata HOM05D002078 ORTHO05D005680 4.3e-32 144.1 813 26.1
BcaC05g26839 Brassica carinata HOM05D010358 ORTHO05D021654 9.6e-32 142.9 201 44.3
BcaC09g49720 Brassica carinata HOM05D010358 ORTHO05D095769 1.2e-29 136.0 296 36.8
BcaB04g18037 Brassica carinata HOM05D002078 ORTHO05D005680 6.5e-28 130.2 243 33.3
BcaC05g27779 Brassica carinata HOM05D002078 ORTHO05D005680 8.4e-28 129.8 149 47.7
BcaC08g43339 Brassica carinata HOM05D002078 ORTHO05D005680 5.5e-27 127.1 141 47.5
BcaC02g10493 Brassica carinata HOM05D002078 ORTHO05D005680 1.2e-26 125.9 259 32.4
BcaC03g16629 Brassica carinata HOM05D002078 ORTHO05D005680 8.7e-25 119.8 164 43.9
BcaC09g49860 Brassica carinata HOM05D002078 ORTHO05D005680 3.1e-22 111.3 229 30.1
BcaB01g01154 Brassica carinata HOM05D002078 ORTHO05D005680 4.1e-22 110.9 165 37.0
BcaC04g22609 Brassica carinata HOM05D002078 ORTHO05D005680 9.0e-22 109.8 233 32.2
BcaB04g17688 Brassica carinata HOM05D010358 ORTHO05D094612 2.0e-21 108.6 164 41.5
BcaB05g23684 Brassica carinata HOM05D010358 ORTHO05D095884 5.9e-21 107.1 195 39.5
Carub.0006s0276 Capsella rubella HOM05D010629 ORTHO05D005680 5.9e-21 107.1 182 34.1
BcaC07g38098 Brassica carinata HOM05D002078 ORTHO05D040046 1.0e-20 106.3 244 36.1
BolC8t48644H Brassica oleracea HOM05D002078 ORTHO05D005680 3.8e-20 104.4 255 31.8
Carub.0073s0002 Capsella rubella HOM05D016834 ORTHO05D016863 3.8e-20 104.4 259 31.3
Carub.0003s2394 Capsella rubella HOM05D016834 ORTHO05D016863 6.5e-20 103.6 405 26.7
Sp7g05200 Schrenkiella parvula HOM05D002078 ORTHO05D005680 6.5e-20 103.6 142 38.7
Carub.0108s0001 Capsella rubella HOM05D016834 ORTHO05D016863 1.1e-19 102.8 430 25.6
Carub.0008s1221 Capsella rubella HOM05D016834 ORTHO05D016863 1.9e-19 102.1 290 28.3
Carub.0003s2886 Capsella rubella HOM05D016834 ORTHO05D016863 7.2e-19 100.1 385 25.2
Carub.0007s2123 Capsella rubella HOM05D010629 ORTHO05D005680 2.7e-18 98.2 534 26.2
Carub.0004s1088 Capsella rubella HOM05D010629 ORTHO05D005680 6.1e-18 97.1 173 35.8
Carub.0009s0003 Capsella rubella HOM05D016834 ORTHO05D016863 1.8e-17 95.5 229 30.6
BcaB02g10958 Brassica carinata HOM05D002078 ORTHO05D005680 2.3e-17 95.1 126 42.1
BcaB01g01285 Brassica carinata HOM05D031829 ORTHO05D005680 3.0e-17 94.7 154 37.7
AL3G15920 Arabidopsis lyrata HOM05D011598 ORTHO05D013181 3.9e-17 94.4 163 36.8
AL7G45790 Arabidopsis lyrata HOM05D011598 ORTHO05D013181 5.1e-17 94.0 161 36.6
Carub.0007s3091 Capsella rubella HOM05D016834 ORTHO05D016863 5.1e-17 94.0 390 26.4
AT2G15420 Arabidopsis thaliana HOM05D010629 ORTHO05D005680 8.8e-17 93.2 290 30.3
BcaB01g01149 Brassica carinata HOM05D002078 ORTHO05D005680 8.8e-17 93.2 127 40.2
AT3G42060 Arabidopsis thaliana HOM05D010629 ORTHO05D005680 1.1e-16 92.8 139 36.0
BcaC09g48774 Brassica carinata HOM05D002078 ORTHO05D005680 1.1e-16 92.8 82 51.2
Sp7g11540 Schrenkiella parvula HOM05D010529 ORTHO05D012528 1.1e-16 92.8 143 38.5
AL1G53160 Arabidopsis lyrata HOM05D011598 ORTHO05D013181 1.5e-16 92.4 163 36.8
BcaC01g01577 Brassica carinata HOM05D002078 ORTHO05D005680 1.5e-16 92.4 102 49.0
Sp4g04860 Schrenkiella parvula HOM05D010772 ORTHO05D005680 1.5e-16 92.4 134 36.6
Sp4g11160 Schrenkiella parvula HOM05D010772 ORTHO05D005680 1.5e-16 92.4 580 23.8
Carub.0005s0210 Capsella rubella HOM05D010629 ORTHO05D005680 3.3e-16 91.3 663 24.6
C07p10230 Brassica napus HOM05D002078 ORTHO05D005680 7.4e-16 90.1 120 43.3
BcaB08g35633 Brassica carinata HOM05D002078 ORTHO05D005680 9.7e-16 89.7 143 37.8
BcaC01g00127 Brassica carinata HOM05D002078 ORTHO05D010191 1.3e-15 89.4 82 50.0
Carub.0006s2612 Capsella rubella HOM05D016834 ORTHO05D016863 1.3e-15 89.4 530 24.9
Carub.0002s1244 Capsella rubella HOM05D010629 ORTHO05D005680 1.7e-15 89.0 501 25.1
AL9U10150 Arabidopsis lyrata HOM05D011598 ORTHO05D013181 3.7e-15 87.8 218 33.0
AT4G32200 Arabidopsis thaliana HOM05D003724 ORTHO05D004367 3.7e-15 87.8 404 27.5
BcaC02g11074 Brassica carinata HOM05D002078 ORTHO05D005680 3.7e-15 87.8 79 48.1
AL3G43600 Arabidopsis lyrata HOM05D010629 ORTHO05D005680 4.8e-15 87.4 125 36.0
BcaC08g43956 Brassica carinata HOM05D002078 ORTHO05D005680 4.8e-15 87.4 77 53.2
AL3G49830 Arabidopsis lyrata HOM05D011598 ORTHO05D013181 8.2e-15 86.7 335 27.5
BcaC01g00627 Brassica carinata HOM05D002078 ORTHO05D005680 1.4e-14 85.9 77 53.2
BcaC06g35304 Brassica carinata HOM05D002078 ORTHO05D005680 1.8e-14 85.5 77 51.9
Carub.0353s0001 Capsella rubella HOM05D010629 ORTHO05D005680 1.8e-14 85.5 507 24.9
BcaC03g15695 Brassica carinata HOM05D002078 ORTHO05D094628 4.1e-14 84.3 141 32.6
BcaC06g35403 Brassica carinata HOM05D002078 ORTHO05D005680 1.2e-13 82.8 612 22.7
BcaC03g16424 Brassica carinata HOM05D002078 ORTHO05D005680 2.0e-13 82.0 86 47.7
BcaB08g34679 Brassica carinata HOM05D002078 ORTHO05D005680 4.5e-13 80.9 92 47.8
Carub.0005s0837 Capsella rubella HOM05D010629 ORTHO05D005680 4.5e-13 80.9 548 24.5
BcaB01g00917 Brassica carinata HOM05D002078 ORTHO05D005680 5.9e-13 80.5 92 48.9
BcaC01g01691 Brassica carinata HOM05D001374 ORTHO05D004296 7.7e-13 80.1 337 26.7
SpUn0003_0260 Schrenkiella parvula HOM05D010529 ORTHO05D012528 7.7e-13 80.1 110 47.3
BcaB03g16240 Brassica carinata HOM05D010358 ORTHO05D095529 1.7e-12 79.0 98 52.0
BcaC03g15670 Brassica carinata HOM05D002078 ORTHO05D005680 1.7e-12 79.0 76 52.6
BcaB01g01532 Brassica carinata HOM05D002078 ORTHO05D005680 2.2e-12 78.6 92 46.7
Sp5g17660 Schrenkiella parvula HOM05D010529 ORTHO05D012528 2.2e-12 78.6 135 35.6
Thhalv10023163m.g Eutrema salsugineum HOM05D010629 ORTHO05D016863 2.9e-12 78.2 113 38.9
BcaB01g02469 Brassica carinata HOM05D002078 ORTHO05D005680 3.8e-12 77.8 63 58.7
Sp6g10630 Schrenkiella parvula HOM05D010529 ORTHO05D012528 1.4e-11 75.9 106 41.5
AT1G32010 Arabidopsis thaliana HOM05D010629 ORTHO05D019745 2.5e-11 75.1 822 23.0
BcaC02g10132 Brassica carinata HOM05D002078 ORTHO05D005680 9.4e-11 73.2 146 37.0
Sp6g07550 Schrenkiella parvula HOM05D010772 ORTHO05D005680 9.4e-11 73.2 218 29.4
BcaB02g06500 Brassica carinata HOM05D010358 ORTHO05D092488 2.7e-10 71.6 74 50.0
Sp4g04760 Schrenkiella parvula HOM05D010772 ORTHO05D005680 2.7e-10 71.6 100 39.0
BcaC06g35551 Brassica carinata HOM05D002078 ORTHO05D005680 3.6e-10 71.2 235 25.1
BcaNung07246 Brassica carinata HOM05D010358 ORTHO05D096077 3.6e-10 71.2 153 32.0
C07p15400 Brassica napus HOM05D002078 ORTHO05D005680 4.7e-10 70.9 118 39.8
Carub.0003s2807 Capsella rubella HOM05D010629 ORTHO05D005680 4.7e-10 70.9 139 30.9
C07p15390 Brassica napus HOM05D010358 ORTHO05D021654 6.1e-10 70.5 108 44.4
CANSAT35G0823 Cannabis sativa HOM05D014149 ORTHO05D004930 1.8e-09 68.9 149 31.5
AT5G38190 Arabidopsis thaliana HOM05D034490 ORTHO05D019745 3.0e-09 68.2 686 23.6
BolC2t08631H Brassica oleracea HOM05D009676 ORTHO05D014479 3.9e-09 67.8 75 45.3
BcaB04g18878 Brassica carinata HOM05D002078 ORTHO05D093117 5.1e-09 67.4 96 46.9
CANSAT01G2276 Cannabis sativa HOM05D014149 ORTHO05D011451 5.1e-09 67.4 148 32.4
Carub.0005s0956 Capsella rubella HOM05D009492 ORTHO05D011693 5.1e-09 67.4 261 26.8
BcaC04g18901 Brassica carinata HOM05D002078 ORTHO05D005680 1.1e-08 66.2 201 27.4
BcaC05g26653 Brassica carinata HOM05D009676 ORTHO05D005680 1.5e-08 65.9 71 47.9
BcaB03g16125 Brassica carinata HOM05D002078 ORTHO05D092046 2.0e-08 65.5 47 72.3
Carub.0002s0916 Capsella rubella HOM05D009492 ORTHO05D011693 2.0e-08 65.5 165 27.9
Carub.0007s3731 Capsella rubella HOM05D009492 ORTHO05D011693 2.0e-08 65.5 166 28.9
A05p19660 Brassica napus HOM05D008596 ORTHO05D003268 2.6e-08 65.1 136 31.6
A08p08190 Brassica napus HOM05D008596 ORTHO05D003268 2.6e-08 65.1 148 29.7
Carub.0072s0001 Capsella rubella HOM05D010629 ORTHO05D005680 2.6e-08 65.1 614 23.6
BcaC08g42804 Brassica carinata HOM05D002078 ORTHO05D005680 1.3e-07 62.8 529 21.6
BolC8t48271H Brassica oleracea HOM05D003421 ORTHO05D003268 1.7e-07 62.4 145 30.3
Carub.0002s0975 Capsella rubella HOM05D009492 ORTHO05D011693 1.7e-07 62.4 127 29.9
BcaC04g21481 Brassica carinata HOM05D009676 ORTHO05D014479 2.2e-07 62.0 543 23.6
BcaC05g26840 Brassica carinata HOM05D010358 ORTHO05D021654 2.2e-07 62.0 462 26.2
Carub.0007s3611 Capsella rubella HOM05D009492 ORTHO05D011693 2.2e-07 62.0 127 29.9
BcaC06g35005 Brassica carinata HOM05D010358 ORTHO05D096373 2.8e-07 61.6 200 29.0
Carub.0008s0728 Capsella rubella HOM05D009492 ORTHO05D011693 3.7e-07 61.2 113 31.0
Carub.0002s1012 Capsella rubella HOM05D010629 ORTHO05D005680 4.8e-07 60.8 513 23.8
BcaC01g04916 Brassica carinata HOM05D009676 ORTHO05D014479 8.2e-07 60.1 544 25.0
Carub.0002s0942 Capsella rubella HOM05D009492 ORTHO05D011693 8.2e-07 60.1 110 31.8
Carub.0007s3050 Capsella rubella HOM05D010629 ORTHO05D005680 1.1e-06 59.7 582 22.5
A01p26930 Brassica napus HOM05D008596 ORTHO05D003268 1.4e-06 59.3 145 30.3
BcaC08g43345 Brassica carinata HOM05D002078 ORTHO05D010191 1.8e-06 58.9 209 27.3
BcaC07g37147 Brassica carinata HOM05D006121 ORTHO05D009559 5.3e-06 57.4 169 28.4
BcaB06g26891 Brassica carinata HOM05D010358 ORTHO05D092341 6.9e-06 57.0 78 51.3


User provided reference genes

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