Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g34312 Brassica carinata HOM05D007011 ORTHO05D008837 6.2e-182 640.6 306 100.0
C07p30430 Brassica napus HOM05D007011 ORTHO05D008837 1.8e-160 569.3 273 99.3
C01p11610 Brassica napus HOM05D007011 ORTHO05D008837 4.1e-157 558.1 306 86.6
BolC5t31113H Brassica oleracea HOM05D007011 ORTHO05D008837 3.4e-156 555.1 306 86.3
C05p14820 Brassica napus HOM05D007011 ORTHO05D008837 2.7e-153 545.4 309 83.8
BolC3t21008H Brassica oleracea HOM05D007011 ORTHO05D008837 3.9e-152 541.6 306 84.6
BolC8t48311H Brassica oleracea HOM05D007011 ORTHO05D008837 1.7e-150 536.2 286 89.9
C06p40070 Brassica napus HOM05D007011 ORTHO05D008837 6.1e-145 517.7 309 81.9
BcaC05g28767 Brassica carinata HOM05D007011 ORTHO05D008837 1.4e-144 516.5 316 79.7
BcaC03g15015 Brassica carinata HOM05D007011 ORTHO05D008837 2.6e-143 512.3 306 81.0
BolC7t43583H Brassica oleracea HOM05D007011 ORTHO05D008837 7.7e-140 500.7 248 96.0
BcaC08g45131 Brassica carinata HOM05D007011 ORTHO05D008837 9.4e-138 493.8 309 78.3
BcaC05g25628 Brassica carinata HOM05D007011 ORTHO05D008837 8.8e-136 487.3 304 78.0
BolC5t33294H Brassica oleracea HOM05D007011 ORTHO05D008837 7.5e-135 484.2 271 85.2
BolC8t48619H Brassica oleracea HOM05D007011 ORTHO05D008837 3.3e-130 468.8 236 94.9
BcaC07g37533 Brassica carinata HOM05D007011 ORTHO05D008837 1.6e-129 466.5 304 72.7
BcaC02g07935 Brassica carinata HOM05D007011 ORTHO05D008837 2.0e-127 459.5 304 71.4
BcaC03g17624 Brassica carinata HOM05D007011 ORTHO05D008837 8.0e-121 437.6 309 69.3
C05p32490 Brassica napus HOM05D007011 ORTHO05D008837 1.0e-115 420.6 231 85.3
BolC5t31983H Brassica oleracea HOM05D007011 ORTHO05D008837 3.0e-115 419.1 231 84.8
C01p38480 Brassica napus HOM05D007011 ORTHO05D008837 1.8e-112 409.8 215 88.4
BraA02t08974Z Brassica rapa HOM05D007011 ORTHO05D008837 6.4e-102 374.8 232 74.1
C08p05270 Brassica napus HOM05D007011 ORTHO05D008837 3.9e-91 339.0 232 66.8
C06p20850 Brassica napus HOM05D007011 ORTHO05D008837 8.7e-91 337.8 224 68.3
BolC6t37272H Brassica oleracea HOM05D007011 ORTHO05D008837 8.7e-91 337.8 224 68.3
BcaC05g27327 Brassica carinata HOM05D000305 ORTHO05D000065 3.3e-82 309.3 218 68.3
BcaC01g01763 Brassica carinata HOM05D007011 ORTHO05D008837 4.5e-79 298.9 194 72.2
BcaC05g25371 Brassica carinata HOM05D007011 ORTHO05D008837 9.9e-79 297.7 194 69.1
BraA08t33780Z Brassica rapa HOM05D007011 ORTHO05D008837 9.9e-79 297.7 231 59.7
BcaC01g00089 Brassica carinata HOM05D007011 ORTHO05D008837 8.4e-78 294.7 194 69.1
BcaNung02468 Brassica carinata HOM05D007011 ORTHO05D008837 2.3e-75 286.6 194 67.0
BcaC04g18660 Brassica carinata HOM05D007011 ORTHO05D008837 5.1e-75 285.4 194 67.5
BcaC08g44613 Brassica carinata HOM05D007011 ORTHO05D008837 8.7e-75 284.6 282 52.8
C07p51970 Brassica napus HOM05D007011 ORTHO05D008837 8.7e-67 258.1 157 77.7
BcaC02g07943 Brassica carinata HOM05D007011 ORTHO05D008837 4.3e-66 255.8 140 89.3
BcaB05g24511 Brassica carinata HOM05D007011 ORTHO05D008837 6.9e-64 248.4 267 46.8
BcaB04g16982 Brassica carinata HOM05D007011 ORTHO05D008837 6.5e-62 241.9 267 45.3
C03p58260 Brassica napus HOM05D007011 ORTHO05D008837 5.5e-61 238.8 267 45.3
C06p04860 Brassica napus HOM05D007011 ORTHO05D008837 1.2e-60 237.7 267 45.3
C07p11970 Brassica napus HOM05D007011 ORTHO05D008837 7.9e-60 235.0 267 44.9
BcaC05g27620 Brassica carinata HOM05D007011 ORTHO05D008837 2.3e-59 233.4 267 44.6
C05p36090 Brassica napus HOM05D007011 ORTHO05D008837 2.3e-59 233.4 267 44.6
C07p11040 Brassica napus HOM05D007011 ORTHO05D008837 2.3e-59 233.4 267 44.9
BcaC07g39807 Brassica carinata HOM05D007011 ORTHO05D008837 3.9e-59 232.6 200 57.0
C04p55380 Brassica napus HOM05D007011 ORTHO05D008837 5.1e-59 232.3 267 44.6
BcaC01g06815 Brassica carinata HOM05D007011 ORTHO05D008837 3.3e-58 229.6 218 53.7
BcaC06g35773 Brassica carinata HOM05D007011 ORTHO05D008837 9.7e-58 228.0 236 45.8
BcaB06g27203 Brassica carinata HOM05D007011 ORTHO05D008837 2.8e-57 226.5 259 44.8
BcaC05g28456 Brassica carinata HOM05D007011 ORTHO05D008837 7.2e-53 211.8 267 43.1
BcaC05g26483 Brassica carinata HOM05D007011 ORTHO05D008837 1.2e-52 211.1 241 41.9
BolC5t31106H Brassica oleracea HOM05D007011 ORTHO05D008837 1.6e-52 210.7 132 69.7
BolC6t35921H Brassica oleracea HOM05D000096 ORTHO05D008837 2.1e-52 210.3 224 50.4
BcaC02g12297 Brassica carinata HOM05D007011 ORTHO05D008837 3.9e-51 206.1 267 42.3
C05p27360 Brassica napus HOM05D007011 ORTHO05D008837 6.7e-51 205.3 267 41.6
BcaB01g01479 Brassica carinata HOM05D007011 ORTHO05D008837 3.3e-50 203.0 269 39.4
C03p75650 Brassica napus HOM05D007011 ORTHO05D008837 2.2e-49 200.3 125 70.4
BcaB07g33137 Brassica carinata HOM05D007011 ORTHO05D008837 5.3e-48 195.7 249 39.8
BcaC06g36231 Brassica carinata HOM05D007011 ORTHO05D008837 2.0e-47 193.7 214 43.9
BolC6t35445H Brassica oleracea HOM05D007011 ORTHO05D008837 1.9e-45 187.2 267 39.3
BolC5t33187H Brassica oleracea HOM05D007011 ORTHO05D008837 4.2e-45 186.0 105 85.7
BcaC06g36163 Brassica carinata HOM05D007011 ORTHO05D008837 3.6e-44 183.0 197 48.7
A07p05900 Brassica napus HOM05D007011 ORTHO05D008837 3.3e-42 176.4 194 47.4
C04p47830 Brassica napus HOM05D007011 ORTHO05D008837 1.8e-35 154.1 267 35.6
BolC5t33266H Brassica oleracea HOM05D007011 ORTHO05D008837 5.2e-35 152.5 210 41.0
BcaB01g01187 Brassica carinata HOM05D007011 ORTHO05D008837 4.4e-34 149.4 149 50.3
BcaB01g01156 Brassica carinata HOM05D007011 ORTHO05D008837 5.7e-34 149.1 285 34.7
C01p48060 Brassica napus HOM05D007011 ORTHO05D008837 2.8e-33 146.7 158 45.6
BraA06t25341Z Brassica rapa HOM05D007011 ORTHO05D008837 1.1e-32 144.8 267 34.1
BcaB04g17596 Brassica carinata HOM05D007011 ORTHO05D008837 4.5e-31 139.4 149 47.0
BolC3t19822H Brassica oleracea HOM05D007011 ORTHO05D008837 1.7e-30 137.5 89 68.5
BcaC06g36116 Brassica carinata HOM05D007011 ORTHO05D008837 3.8e-30 136.3 149 46.3
C06p14510 Brassica napus HOM05D007011 ORTHO05D008837 1.1e-29 134.8 87 67.8
BolC3t16993H Brassica oleracea HOM05D007011 ORTHO05D008837 1.5e-29 134.4 87 66.7
BcaB05g22953 Brassica carinata HOM05D007011 ORTHO05D008837 3.4e-26 123.2 135 45.9
BcaB05g23795 Brassica carinata HOM05D007011 ORTHO05D008837 2.4e-24 117.1 132 45.5
BcaC06g36019 Brassica carinata HOM05D007011 ORTHO05D008837 4.1e-24 116.3 147 43.5
BraA01t02471Z Brassica rapa HOM05D007011 ORTHO05D008837 2.7e-23 113.6 222 31.5
BcaB01g01040 Brassica carinata HOM05D007011 ORTHO05D008837 3.5e-23 113.2 127 46.5
C04p05480 Brassica napus HOM05D007011 ORTHO05D008837 1.9e-21 107.5 119 45.4
Carub.0033s0001 Capsella rubella HOM05D007011 ORTHO05D008837 1.4e-19 101.3 197 28.9
Carub.0008s2399 Capsella rubella HOM05D007011 ORTHO05D008837 4.0e-19 99.8 197 27.9
BcaC05g27078 Brassica carinata HOM05D007011 ORTHO05D008837 1.2e-18 98.2 69 65.2
C05p29590 Brassica napus HOM05D007011 ORTHO05D008837 1.2e-18 98.2 69 65.2
BolC5t31690H Brassica oleracea HOM05D007011 ORTHO05D008837 1.2e-18 98.2 69 65.2
CARHR114920 Cardamine hirsuta HOM05D008686 ORTHO05D010632 9.8e-18 95.1 223 26.9
BcaC06g35385 Brassica carinata HOM05D007011 ORTHO05D008837 1.7e-17 94.4 70 60.0
BcaB01g01369 Brassica carinata HOM05D007011 ORTHO05D008837 2.8e-17 93.6 116 44.8
C05p45430 Brassica napus HOM05D007011 ORTHO05D008837 4.9e-17 92.8 129 38.8
Carub.0211s0001 Capsella rubella HOM05D018391 ORTHO05D020270 6.3e-17 92.4 220 30.5
BcaB07g32280 Brassica carinata HOM05D007011 ORTHO05D008837 2.4e-16 90.5 94 50.0
BolC2t08703H Brassica oleracea HOM05D007011 ORTHO05D008837 2.4e-16 90.5 84 51.2
Sp6g12450 Schrenkiella parvula HOM05D035215 ORTHO05D008837 2.4e-16 90.5 224 28.1
Carub.0008s1611 Capsella rubella HOM05D008686 ORTHO05D010632 2.0e-15 87.4 235 26.4
BcaB07g33902 Brassica carinata HOM05D000977 ORTHO05D008837 4.5e-15 86.3 93 43.0
BcaC01g02223 Brassica carinata HOM05D007011 ORTHO05D008837 1.0e-14 85.1 58 65.5
Carub.0004s0690 Capsella rubella HOM05D008686 ORTHO05D010632 1.7e-14 84.3 235 26.0
BcaC02g10747 Brassica carinata HOM05D007011 ORTHO05D008837 2.3e-14 84.0 76 50.0
Carub.0005s2790 Capsella rubella HOM05D008686 ORTHO05D010632 2.9e-14 83.6 261 24.5
C04p25440 Brassica napus HOM05D007011 ORTHO05D008837 3.8e-14 83.2 69 52.2
C08p18010 Brassica napus HOM05D002589 ORTHO05D002742 3.8e-14 83.2 69 58.0
BolC1t02273H Brassica oleracea HOM05D007011 ORTHO05D008837 3.8e-14 83.2 79 51.9
BcaC02g09397 Brassica carinata HOM05D007011 ORTHO05D008837 6.6e-14 82.4 80 48.8
BcaB01g01346 Brassica carinata HOM05D000305 ORTHO05D000065 8.6e-14 82.0 72 54.2
Carub.0001s3313 Capsella rubella HOM05D008686 ORTHO05D010632 8.6e-14 82.0 230 26.5
BcaC06g36176 Brassica carinata HOM05D007011 ORTHO05D008837 8.9e-11 72.0 64 50.0
BcaB07g32260 Brassica carinata HOM05D007011 ORTHO05D008837 7.5e-10 68.9 107 39.3
C01p39260 Brassica napus HOM05D032673 ORTHO05D008837 7.5e-10 68.9 94 36.2
BcaB07g32769 Brassica carinata HOM05D007011 ORTHO05D008837 9.8e-10 68.6 63 49.2
Sp7g03840 Schrenkiella parvula HOM05D016270 ORTHO05D019360 1.3e-09 68.2 147 25.9
C01p41250 Brassica napus HOM05D032673 ORTHO05D042076 6.3e-09 65.9 211 24.2
BcaB01g01608 Brassica carinata HOM05D007011 ORTHO05D008837 8.3e-09 65.5 62 51.6
MELO3C031466.2 Cucumis melo HOM05D003454 ORTHO05D004637 1.1e-08 65.1 192 22.9
C03p69260 Brassica napus HOM05D007011 ORTHO05D008837 2.4e-08 63.9 70 50.0
THA.LOC104825583 Tarenaya hassleriana HOM05D008984 ORTHO05D011467 4.1e-08 63.2 207 23.2
MELO3C029729.2 Cucumis melo HOM05D003454 ORTHO05D004637 9.2e-08 62.0 184 25.5
BcaB03g15265 Brassica carinata HOM05D007011 ORTHO05D008837 1.2e-07 61.6 71 46.5
C06p11410 Brassica napus HOM05D007011 ORTHO05D008837 1.2e-07 61.6 51 52.9
MELO3C028791.2 Cucumis melo HOM05D003454 ORTHO05D004637 1.2e-07 61.6 179 24.6
THA.LOC104820182 Tarenaya hassleriana HOM05D008984 ORTHO05D011467 1.2e-07 61.6 198 27.8
CANSAT54G1326 Cannabis sativa HOM05D014718 ORTHO05D002074 1.6e-07 61.2 184 22.8
MELO3C033948.2 Cucumis melo HOM05D003454 ORTHO05D004637 1.6e-07 61.2 189 22.8
MELO3C030551.2 Cucumis melo HOM05D003454 ORTHO05D004637 2.7e-07 60.5 189 24.3
THA.LOC104822797 Tarenaya hassleriana HOM05D008984 ORTHO05D011467 2.7e-07 60.5 207 22.2
Sp3g24020 Schrenkiella parvula HOM05D035215 ORTHO05D008837 7.8e-07 58.9 165 24.8
MELO3C030164.2 Cucumis melo HOM05D003454 ORTHO05D004637 1.0e-06 58.5 190 23.7
MELO3C033438.2 Cucumis melo HOM05D003454 ORTHO05D004637 1.0e-06 58.5 181 23.8
THA.LOC104808349 Tarenaya hassleriana HOM05D008984 ORTHO05D011467 1.3e-06 58.2 207 22.2
A02p25900 Brassica napus HOM05D007011 ORTHO05D042806 2.3e-06 57.4 71 43.7
MELO3C033866.2 Cucumis melo HOM05D003454 ORTHO05D004637 2.3e-06 57.4 190 21.6
THA.LOC104805003 Tarenaya hassleriana HOM05D008984 ORTHO05D011467 2.9e-06 57.0 188 23.9
MELO3C035613.2 Cucumis melo HOM05D003454 ORTHO05D004637 5.0e-06 56.2 218 19.7


User provided reference genes

Program Settings