Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g34305 Brassica carinata HOM05D009070 ORTHO05D010560 1.2e-82 309.7 147 100.0
C07p30530 Brassica napus HOM05D009070 ORTHO05D010560 7.4e-80 300.4 146 96.6
BolC7t43595H Brassica oleracea HOM05D009070 ORTHO05D010560 1.4e-78 296.2 147 95.2
A06p45440 Brassica napus HOM05D009070 ORTHO05D010560 3.5e-74 281.6 148 90.5
BraA06t27412Z Brassica rapa HOM05D009070 ORTHO05D010560 1.8e-73 279.3 148 89.9
BcaC06g31338 Brassica carinata HOM05D009070 ORTHO05D010560 3.8e-60 235.0 131 84.7
BcaC06g31430 Brassica carinata HOM05D009070 ORTHO05D010560 3.2e-59 231.9 131 83.2
Thhalv10001063m.g Eutrema salsugineum HOM05D009070 ORTHO05D010560 1.1e-48 196.8 147 58.5
BolC7t43665H Brassica oleracea HOM05D009070 ORTHO05D010560 6.3e-47 191.0 150 60.7
A06p44940 Brassica napus HOM05D009070 ORTHO05D010560 8.2e-47 190.7 150 60.0
BraA06t27365Z Brassica rapa HOM05D009070 ORTHO05D010560 8.2e-47 190.7 150 60.0
BcaC06g31365 Brassica carinata HOM05D009070 ORTHO05D010560 1.4e-46 189.9 142 64.1
C07p31240 Brassica napus HOM05D009070 ORTHO05D010560 2.4e-46 189.1 150 60.0
Sp2g12310 Schrenkiella parvula HOM05D009070 ORTHO05D010560 1.0e-44 183.7 147 59.9
BcaC06g31339 Brassica carinata HOM05D009070 ORTHO05D010560 6.5e-44 181.0 149 61.1
BcaC06g31355 Brassica carinata HOM05D009070 ORTHO05D010560 2.8e-39 165.6 146 56.2
BcaC03g16907 Brassica carinata HOM05D009070 ORTHO05D010560 1.6e-37 159.8 145 52.4
C02p48100 Brassica napus HOM05D009070 ORTHO05D010560 5.5e-35 151.4 148 50.7
BraA02t08070Z Brassica rapa HOM05D009070 ORTHO05D010560 1.2e-34 150.2 145 49.7
A02p30520 Brassica napus HOM05D009070 ORTHO05D010560 1.6e-34 149.8 145 49.0
AL8G10370 Arabidopsis lyrata HOM05D009070 ORTHO05D010560 4.7e-34 148.3 114 58.8
AT5G47600 Arabidopsis thaliana HOM05D009070 ORTHO05D010560 4.7e-34 148.3 134 55.2
BolC2t10841H Brassica oleracea HOM05D009070 ORTHO05D010560 8.8e-33 144.1 148 49.3
Carub.0008s0019 Capsella rubella HOM05D009070 ORTHO05D010560 1.5e-32 143.3 119 55.5
CARHR173720 Cardamine hirsuta HOM05D009070 ORTHO05D010560 2.2e-31 139.4 133 52.6
CARHR173750 Cardamine hirsuta HOM05D009070 ORTHO05D010560 9.1e-30 134.0 105 55.2
THA.LOC104812801 Tarenaya hassleriana HOM05D009070 ORTHO05D010560 2.9e-28 129.0 112 47.3
Aa31LG9G5420 Aethionema arabicum HOM05D009070 ORTHO05D010560 2.7e-26 122.5 95 55.8
BcaC05g26794 Brassica carinata HOM05D009070 ORTHO05D010560 4.5e-21 105.1 117 47.9
BcaB08g35845 Brassica carinata HOM05D009070 ORTHO05D010560 1.3e-15 87.0 67 61.2
Actinidia02127 Actinidia chinensis HOM05D009070 ORTHO05D010560 4.1e-14 82.0 96 34.4
C03p42220 Brassica napus HOM05D009070 ORTHO05D010560 5.9e-13 78.2 72 51.4
Rhsim05G0054600 Rhododendron simsii HOM05D009070 ORTHO05D010560 1.9e-11 73.2 96 31.2
AT1G12180 Arabidopsis thaliana HOM05D037278 ORTHO05D031405 3.7e-07 58.9 77 42.9
Dinv39137 Davidia involucrata HOM05D001099 ORTHO05D010560 3.7e-07 58.9 97 30.9
Sabra03G0046400 Salix brachista HOM05D009070 ORTHO05D010560 6.4e-07 58.2 104 30.8
vmacro20795 Vaccinium macrocarpon HOM05D009070 ORTHO05D010560 3.2e-06 55.8 94 33.0
AL1G23450 Arabidopsis lyrata HOM05D037278 ORTHO05D031405 4.1e-06 55.5 77 40.3


User provided reference genes

Program Settings