Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g34302 Brassica carinata HOM05D008086 ORTHO05D004972 2.1e-154 548.9 265 100.0
C07p30570 Brassica napus HOM05D008086 ORTHO05D004972 6.0e-149 530.8 269 96.3
BcaC04g19776 Brassica carinata HOM05D008086 ORTHO05D004972 2.5e-126 455.7 261 82.8
C09p51830 Brassica napus HOM05D008086 ORTHO05D004972 1.2e-125 453.4 261 82.4
BolC1t05406H Brassica oleracea HOM05D008086 ORTHO05D004972 8.8e-124 447.2 268 81.0
BcaC06g31340 Brassica carinata HOM05D008086 ORTHO05D004972 1.8e-121 439.5 269 77.7
BolC9t58045H Brassica oleracea HOM05D008086 ORTHO05D004972 7.0e-121 437.6 258 80.6
BcaC06g31429 Brassica carinata HOM05D008086 ORTHO05D004972 1.2e-120 436.8 269 76.6
A01p41900 Brassica napus HOM05D008086 ORTHO05D004972 2.0e-120 436.0 265 79.2
BraA06t27411Z Brassica rapa HOM05D008086 ORTHO05D004972 2.2e-119 432.6 261 78.5
BcaC03g17198 Brassica carinata HOM05D008086 ORTHO05D004972 1.1e-110 403.7 256 74.2
BcaNung07056 Brassica carinata HOM05D008086 ORTHO05D004972 1.1e-110 403.7 229 85.6
C02p51250 Brassica napus HOM05D008086 ORTHO05D004972 1.1e-110 403.7 256 74.2
BolC2t11215H Brassica oleracea HOM05D008086 ORTHO05D004972 1.1e-110 403.7 256 74.2
A10p16630 Brassica napus HOM05D008086 ORTHO05D004972 2.3e-108 396.0 231 82.3
BcaC03g16869 Brassica carinata HOM05D008086 ORTHO05D004972 1.2e-104 383.6 264 70.5
A06p45430 Brassica napus HOM05D008086 ORTHO05D004972 2.1e-101 372.9 232 77.6
BcaC09g48101 Brassica carinata HOM05D003507 ORTHO05D004324 6.1e-101 371.3 233 78.5
A02p30530 Brassica napus HOM05D008086 ORTHO05D004972 2.9e-95 352.4 233 72.5
BraA02t08035Z Brassica rapa HOM05D008086 ORTHO05D004972 1.1e-94 350.5 267 65.5
C07p30540 Brassica napus HOM05D008086 ORTHO05D004972 7.2e-94 347.8 261 68.2
BraA02t08074Z Brassica rapa HOM05D008086 ORTHO05D004972 1.1e-89 334.0 276 60.5
BolC2t10802H Brassica oleracea HOM05D008086 ORTHO05D004972 3.1e-89 332.4 253 63.2
BraA02t08071Z Brassica rapa HOM05D008086 ORTHO05D004972 1.2e-88 330.5 248 64.5
BcaC06g34304 Brassica carinata HOM05D008086 ORTHO05D004972 2.3e-87 326.2 229 71.6
A02p30570 Brassica napus HOM05D008086 ORTHO05D004972 5.0e-87 325.1 276 59.8
BcaB07g30809 Brassica carinata HOM05D008086 ORTHO05D004972 1.9e-81 306.6 236 64.0
C02p47660 Brassica napus HOM05D008086 ORTHO05D004972 8.6e-79 297.7 237 62.0
C07p31230 Brassica napus HOM05D008086 ORTHO05D004972 1.9e-78 296.6 262 56.1
BolC7t43664H Brassica oleracea HOM05D008086 ORTHO05D004972 2.5e-78 296.2 262 55.7
BraA06t27366Z Brassica rapa HOM05D008086 ORTHO05D004972 2.8e-77 292.7 260 55.4
CARHR173760 Cardamine hirsuta HOM05D008086 ORTHO05D004972 8.0e-77 291.2 260 57.7
AL8G10360 Arabidopsis lyrata HOM05D008086 ORTHO05D004972 4.0e-76 288.9 265 60.0
BcaC06g31364 Brassica carinata HOM05D008086 ORTHO05D004972 8.9e-76 287.7 256 56.6
A06p44950 Brassica napus HOM05D008086 ORTHO05D004972 2.0e-75 286.6 244 57.8
BcaC06g31366 Brassica carinata HOM05D008086 ORTHO05D004972 2.9e-74 282.7 245 56.3
BcaC03g16909 Brassica carinata HOM05D008086 ORTHO05D004972 6.4e-74 281.6 226 63.3
C07p31250 Brassica napus HOM05D008086 ORTHO05D004972 1.9e-73 280.0 267 56.9
A06p44930 Brassica napus HOM05D008086 ORTHO05D004972 3.2e-73 279.3 258 57.8
BraA06t27364Z Brassica rapa HOM05D008086 ORTHO05D004972 3.2e-73 279.3 258 57.8
AL8G10380 Arabidopsis lyrata HOM05D008086 ORTHO05D004972 9.2e-73 277.7 258 57.4
C07p31290 Brassica napus HOM05D008086 ORTHO05D004972 1.2e-72 277.3 267 55.8
CARHR173730 Cardamine hirsuta HOM05D008086 ORTHO05D004972 2.1e-72 276.6 266 54.9
BcaC06g34235 Brassica carinata HOM05D008086 ORTHO05D004972 2.7e-72 276.2 268 56.3
BolC7t43666H Brassica oleracea HOM05D008086 ORTHO05D004972 6.0e-72 275.0 268 56.7
Carub.0008s0020 Capsella rubella HOM05D008086 ORTHO05D004972 2.3e-71 273.1 260 56.9
BcaC06g34237 Brassica carinata HOM05D008086 ORTHO05D004972 8.6e-71 271.2 283 53.4
BolC2t10843H Brassica oleracea HOM05D008086 ORTHO05D004972 3.3e-70 269.2 216 63.4
Thhalv10001213m.g Eutrema salsugineum HOM05D008086 ORTHO05D004972 7.3e-70 268.1 210 61.4
CARHR174690 Cardamine hirsuta HOM05D008086 ORTHO05D004972 2.3e-68 263.1 247 55.5
CARHR183270 Cardamine hirsuta HOM05D008086 ORTHO05D004972 5.2e-68 261.9 253 56.1
BcaC06g31356 Brassica carinata HOM05D008086 ORTHO05D004972 3.4e-67 259.2 282 50.4
BcaC03g16910 Brassica carinata HOM05D008086 ORTHO05D004972 2.2e-66 256.5 246 56.1
Aa31LG9G5430 Aethionema arabicum HOM05D008086 ORTHO05D004972 2.4e-65 253.1 242 54.1
THA.LOC104798375 Tarenaya hassleriana HOM05D008086 ORTHO05D004972 2.7e-64 249.6 253 51.4
C02p48110 Brassica napus HOM05D008086 ORTHO05D004972 4.0e-60 235.7 198 62.1
A02p30540 Brassica napus HOM05D008086 ORTHO05D004972 3.5e-56 222.6 146 74.7
BraA02t08072Z Brassica rapa HOM05D008086 ORTHO05D004972 3.3e-54 216.1 145 72.4
CARHR173740 Cardamine hirsuta HOM05D008086 ORTHO05D004972 1.3e-53 214.2 247 48.6
A02p30190 Brassica napus HOM05D008086 ORTHO05D004972 5.1e-47 192.2 138 68.8
AT5G47590 Arabidopsis thaliana HOM05D008086 ORTHO05D004972 1.5e-46 190.7 169 59.2
C07p32950 Brassica napus HOM05D008086 ORTHO05D004972 1.7e-42 177.2 125 68.0
C03p62430 Brassica napus HOM05D008086 ORTHO05D004972 1.9e-41 173.7 164 53.7
BolC2t10844H Brassica oleracea HOM05D008086 ORTHO05D041227 4.6e-40 169.1 158 57.0
BolC3t18501H Brassica oleracea HOM05D008086 ORTHO05D004972 1.1e-36 157.9 153 52.3
C02p48120 Brassica napus HOM05D008086 ORTHO05D041227 1.3e-29 134.4 80 75.0
Carub.0007s2493 Capsella rubella HOM05D007337 ORTHO05D004972 1.4e-28 131.0 267 31.8
Thhalv10026831m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 5.3e-28 129.0 263 30.8
AT4G16545 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 3.4e-27 126.3 267 30.3
AT2G03020 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 7.6e-27 125.2 264 31.4
BcaC07g37998 Brassica carinata HOM05D007337 ORTHO05D004972 1.0e-26 124.8 238 30.3
BolC8t48380H Brassica oleracea HOM05D007337 ORTHO05D004972 2.9e-26 123.2 275 30.9
THA.LOC104815492 Tarenaya hassleriana HOM05D007337 ORTHO05D004972 6.5e-26 122.1 267 31.1
Aa31LG2G12670 Aethionema arabicum HOM05D007337 ORTHO05D004972 2.5e-25 120.2 254 29.1
A02p20510 Brassica napus HOM05D007337 ORTHO05D004972 7.1e-25 118.6 202 38.6
A08p12570 Brassica napus HOM05D007337 ORTHO05D004972 9.3e-25 118.2 253 31.2
BraA08t33248Z Brassica rapa HOM05D007337 ORTHO05D004972 9.3e-25 118.2 253 31.2
Carub.0007s2487 Capsella rubella HOM05D007337 ORTHO05D004972 9.3e-25 118.2 279 31.2
QL12p012461 Quercus lobata HOM05D008086 ORTHO05D004972 1.2e-24 117.9 245 34.7
BcaNung02865 Brassica carinata HOM05D007337 ORTHO05D004972 2.7e-24 116.7 254 30.3
A03p49980 Brassica napus HOM05D007337 ORTHO05D004972 7.9e-24 115.2 249 29.7
BraA03t14091Z Brassica rapa HOM05D007337 ORTHO05D004972 7.9e-24 115.2 249 29.7
C02p33330 Brassica napus HOM05D007337 ORTHO05D004972 1.0e-23 114.8 202 38.1
Carub.0007s2488 Capsella rubella HOM05D007337 ORTHO05D004972 1.8e-23 114.0 252 30.2
BcaC06g33493 Brassica carinata HOM05D007337 ORTHO05D004972 2.3e-23 113.6 245 29.0
QL12p012450 Quercus lobata HOM05D007337 ORTHO05D004972 2.3e-23 113.6 212 33.0
A01p20860 Brassica napus HOM05D007337 ORTHO05D004972 3.0e-23 113.2 240 31.7
Thecc.03G253000 Theobroma cacao HOM05D008086 ORTHO05D004972 6.7e-23 112.1 120 50.0
Thhalv10026050m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 8.7e-23 111.7 239 29.3
A03p49990 Brassica napus HOM05D007337 ORTHO05D004972 1.5e-22 110.9 263 29.7
BolC2t09369H Brassica oleracea HOM05D007337 ORTHO05D004972 3.3e-22 109.8 224 33.5
Thhalv10026211m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 5.7e-22 109.0 229 28.8
AL7G38320 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 1.3e-21 107.8 274 27.7
BcaC06g33494 Brassica carinata HOM05D007337 ORTHO05D004972 1.3e-21 107.8 277 29.2
BcaNung02864 Brassica carinata HOM05D007337 ORTHO05D004972 1.3e-21 107.8 270 29.6
AL1G32140 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 2.8e-21 106.7 262 26.3
Thhalv10000293m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 4.8e-21 105.9 263 27.8
BcaC03g15651 Brassica carinata HOM05D007337 ORTHO05D004972 6.3e-21 105.5 216 33.3
BcaC09g50366 Brassica carinata HOM05D007337 ORTHO05D004972 1.1e-20 104.8 217 29.0
BcaNung00176 Brassica carinata HOM05D007337 ORTHO05D004972 1.1e-20 104.8 217 29.0
C07p48020 Brassica napus HOM05D007337 ORTHO05D004972 1.4e-20 104.4 118 39.8
BolC7t45326H Brassica oleracea HOM05D007337 ORTHO05D004972 1.4e-20 104.4 142 38.0
BraA01t02004Z Brassica rapa HOM05D007337 ORTHO05D004972 1.8e-20 104.0 242 30.2
BcaNung00177 Brassica carinata HOM05D007337 ORTHO05D004972 2.4e-20 103.6 218 29.8
CARHR223030 Cardamine hirsuta HOM05D007337 ORTHO05D004972 4.1e-20 102.8 272 27.6
Sp7g15130 Schrenkiella parvula HOM05D007337 ORTHO05D004972 4.1e-20 102.8 246 26.4
Sp7g15120 Schrenkiella parvula HOM05D007337 ORTHO05D004972 5.3e-20 102.4 251 27.5
BolC1t02562H Brassica oleracea HOM05D007337 ORTHO05D004972 1.5e-19 100.9 242 29.8
Carub.0007s2491 Capsella rubella HOM05D007337 ORTHO05D004972 1.5e-19 100.9 271 27.7
AT4G16550 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 2.6e-19 100.1 244 29.5
AL7G38300 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 7.7e-19 98.6 287 26.8
Carub.0007s2489 Capsella rubella HOM05D007337 ORTHO05D004972 6.5e-18 95.5 283 27.2
BcaC03g13098 Brassica carinata HOM05D007337 ORTHO05D004972 2.5e-17 93.6 213 30.0
BolC1t02561H Brassica oleracea HOM05D007337 ORTHO05D004972 3.2e-17 93.2 248 25.4
BcaC09g50365 Brassica carinata HOM05D007337 ORTHO05D004972 4.2e-17 92.8 225 29.3
BraA01t02003Z Brassica rapa HOM05D007337 ORTHO05D004972 4.2e-17 92.8 248 25.8
AL7G38280 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 5.5e-17 92.4 239 26.8
BcaC09g50370 Brassica carinata HOM05D007337 ORTHO05D004972 5.5e-17 92.4 248 25.4
BcaC06g33489 Brassica carinata HOM05D007337 ORTHO05D004972 1.2e-16 91.3 244 26.6
BcaC09g50368 Brassica carinata HOM05D007337 ORTHO05D004972 1.2e-16 91.3 248 25.8
BcaNung00175 Brassica carinata HOM05D007337 ORTHO05D004972 1.2e-16 91.3 248 25.8
A03p49960 Brassica napus HOM05D007337 ORTHO05D004972 1.6e-16 90.9 250 28.4
BraA03t14088Z Brassica rapa HOM05D007337 ORTHO05D004972 2.1e-16 90.5 250 28.4
Sp7g15160 Schrenkiella parvula HOM05D007337 ORTHO05D004972 2.1e-16 90.5 228 28.5
C01p26190 Brassica napus HOM05D007337 ORTHO05D004972 2.7e-16 90.1 268 26.9
Sp7g15140 Schrenkiella parvula HOM05D007337 ORTHO05D004972 3.6e-16 89.7 244 29.1
AT4G16540 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 4.6e-16 89.4 119 36.1
C01p26180 Brassica napus HOM05D007337 ORTHO05D004972 6.1e-16 89.0 246 24.0
BcaC06g33495 Brassica carinata HOM05D007337 ORTHO05D004972 1.0e-15 88.2 250 27.2
BcaNung02862 Brassica carinata HOM05D007337 ORTHO05D004972 1.0e-15 88.2 250 27.2
BcaC06g33497 Brassica carinata HOM05D007337 ORTHO05D004972 2.3e-15 87.0 250 26.8
A01p20850 Brassica napus HOM05D007337 ORTHO05D004972 2.3e-15 87.0 246 24.0
C07p47780 Brassica napus HOM05D007337 ORTHO05D004972 2.3e-15 87.0 254 26.8
Thhalv10026955m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 2.3e-15 87.0 128 36.7
BcaC06g33490 Brassica carinata HOM05D007337 ORTHO05D004972 3.9e-15 86.3 200 32.5
C03p31540 Brassica napus HOM05D007337 ORTHO05D004972 5.1e-15 85.9 224 28.1
AT4G16560 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 6.7e-15 85.5 114 40.4
Sp7g15150 Schrenkiella parvula HOM05D007337 ORTHO05D004972 6.7e-15 85.5 243 27.6
C07p48030 Brassica napus HOM05D007337 ORTHO05D004972 1.5e-14 84.3 238 27.7
CARHR223020 Cardamine hirsuta HOM05D007337 ORTHO05D004972 2.0e-14 84.0 274 25.5
BolC7t45302H Brassica oleracea HOM05D007337 ORTHO05D004972 2.5e-14 83.6 253 25.7
BcaC06g33478 Brassica carinata HOM05D007337 ORTHO05D004972 3.3e-14 83.2 246 26.0
BolC3t15498H Brassica oleracea HOM05D007337 ORTHO05D004972 4.3e-14 82.8 222 27.5
AL7G38340 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 5.7e-14 82.4 262 28.2
BcaC01g04975 Brassica carinata HOM05D007337 ORTHO05D004972 7.4e-14 82.0 213 27.7
CARHR222970 Cardamine hirsuta HOM05D007337 ORTHO05D004972 1.3e-13 81.3 116 37.1
A03p50000 Brassica napus HOM05D007337 ORTHO05D004972 2.2e-13 80.5 238 26.9
AL7G38310 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 8.2e-13 78.6 261 27.6
C07p48000 Brassica napus HOM05D007337 ORTHO05D004972 1.8e-12 77.4 211 31.8
BolC7t45327H Brassica oleracea HOM05D007337 ORTHO05D004972 2.6e-11 73.6 234 27.8
C07p47990 Brassica napus HOM05D007337 ORTHO05D004972 5.9e-11 72.4 244 24.2
BolC4t21835H Brassica oleracea HOM05D007337 ORTHO05D004972 3.8e-10 69.7 249 25.3
BolC4t21837H Brassica oleracea HOM05D007337 ORTHO05D004972 3.8e-10 69.7 249 25.3
BolC4t21838H Brassica oleracea HOM05D007337 ORTHO05D004972 3.8e-10 69.7 249 25.3
AT4G16555 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 1.4e-09 67.8 132 32.6
PGSC0003DMG400004806 Solanum tuberosum HOM05D008086 ORTHO05D010560 1.6e-08 64.3 96 35.4
Peaxi162Scf00002g01721 Petunia axillaris HOM05D008086 ORTHO05D010560 2.1e-08 63.9 96 35.4
Sopen08g027190 Solanum pennellii HOM05D001099 ORTHO05D010560 2.1e-08 63.9 96 35.4
CAN.G1218.23 Capsicum annuum HOM05D008086 ORTHO05D010560 7.9e-08 62.0 96 33.3
Solyc08g078720.3 Solanum lycopersicum HOM05D008086 ORTHO05D010560 1.0e-07 61.6 96 34.4
CARHR223010 Cardamine hirsuta HOM05D007337 ORTHO05D004972 3.9e-07 59.7 73 37.0
Nitab4.5_0008481g0040 Nicotiana tabacum HOM05D008086 ORTHO05D010560 1.1e-06 58.2 96 33.3
Nitab4.5_0000312g0140 Nicotiana tabacum HOM05D001099 ORTHO05D010560 1.5e-06 57.8 96 32.3
Dinv39135 Davidia involucrata HOM05D009070 ORTHO05D010560 5.7e-06 55.8 106 32.1


User provided reference genes

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