Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g34224 Brassica carinata HOM05D014993 ORTHO05D000687 1.3e-32 142.5 75 100.0
BolC7t43691H Brassica oleracea HOM05D014993 ORTHO05D000687 1.3e-32 142.5 75 100.0
BraA06t27345Z Brassica rapa HOM05D014993 ORTHO05D000687 1.8e-26 122.1 64 98.4
BcaC06g31341 Brassica carinata HOM05D000913 ORTHO05D000687 1.7e-24 115.5 73 76.7
A06p44730 Brassica napus HOM05D014993 ORTHO05D000687 6.1e-22 107.1 58 98.3
Sp2g12500 Schrenkiella parvula HOM05D000913 ORTHO05D000687 4.1e-18 94.4 74 64.9
BcaC05g30224 Brassica carinata HOM05D000913 ORTHO05D000687 1.2e-17 92.8 70 67.1
BcaC05g30196 Brassica carinata HOM05D014993 ORTHO05D000687 1.3e-16 89.4 72 63.9
C07p31480 Brassica napus HOM05D014993 ORTHO05D000687 6.5e-16 87.0 46 100.0
A05p43030 Brassica napus HOM05D014993 ORTHO05D000687 1.2e-14 82.8 67 62.7
BraA05t23047Z Brassica rapa HOM05D014993 ORTHO05D000687 1.2e-14 82.8 67 62.7
C05p62790 Brassica napus HOM05D014993 ORTHO05D000687 8.0e-14 80.1 67 61.2
BolC5t34932H Brassica oleracea HOM05D014993 ORTHO05D000687 8.0e-14 80.1 67 61.2
TPR.G10472 Trifolium pratense HOM05D000913 ORTHO05D000687 2.8e-11 71.6 72 54.2
BraA05t23123Z Brassica rapa HOM05D006073 ORTHO05D007354 8.3e-11 70.1 77 53.2
Glyma.09G016400 Glycine max HOM05D000913 ORTHO05D000687 8.3e-11 70.1 72 50.0
Potri.001G468500 Populus trichocarpa HOM05D000913 ORTHO05D000687 1.1e-10 69.7 71 52.1
Medtr2g027600 Medicago truncatula HOM05D000913 ORTHO05D000687 1.4e-10 69.3 72 51.4
Glyma.15G122200 Glycine max HOM05D000913 ORTHO05D000687 2.4e-10 68.6 72 50.0
Medtr0635s0010 Medicago truncatula HOM05D000913 ORTHO05D000687 4.1e-10 67.8 71 50.7
Lj6g0007781 Lotus japonicus HOM05D000913 ORTHO05D000687 9.1e-10 66.6 72 50.0
QL05p005810 Quercus lobata HOM05D000913 ORTHO05D000687 1.2e-09 66.2 74 47.3
arahy.Tifrunner.gnm1.ann1.RGK4QC Arachis hypogaea HOM05D000913 ORTHO05D000687 1.6e-09 65.9 72 45.8
Nn7g37143 Nelumbo nucifera HOM05D000913 ORTHO05D000687 1.6e-09 65.9 68 50.0
Lalb_Chr18g0057461 Lupinus albus HOM05D000913 ORTHO05D000687 2.0e-09 65.5 72 44.4
Hma1.2p1_0048F.1_g028140 Hydrangea macrophylla HOM05D000913 ORTHO05D000687 2.7e-09 65.1 71 49.3
QL05p004788 Quercus lobata HOM05D000913 ORTHO05D000687 2.7e-09 65.1 74 47.3
QL05p066543 Quercus lobata HOM05D000913 ORTHO05D000687 2.7e-09 65.1 71 49.3
CSS0028038 Camellia sinensis var. sinensis HOM05D000913 ORTHO05D000687 4.5e-09 64.3 72 47.2
Nn1g06060 Nelumbo nucifera HOM05D000913 ORTHO05D000687 4.5e-09 64.3 70 52.9
Psat1g171760 Pisum sativum HOM05D000913 ORTHO05D000687 5.9e-09 63.9 72 50.0
QL08p005455 Quercus lobata HOM05D000913 ORTHO05D000687 5.9e-09 63.9 72 47.2
FAN25G0550 Fragaria x ananassa HOM05D000913 ORTHO05D000687 7.7e-09 63.5 71 49.3
Phvul.006G135600 Phaseolus vulgaris HOM05D000913 ORTHO05D000687 7.7e-09 63.5 72 48.6
Eucgr.E04208 Eucalyptus grandis HOM05D000913 ORTHO05D000687 1.0e-08 63.2 71 50.7
QL05p066539 Quercus lobata HOM05D000913 ORTHO05D000687 1.0e-08 63.2 71 47.9
TAR629G2544 Trochodendron aralioides HOM05D000913 ORTHO05D000687 1.0e-08 63.2 74 47.3
Gohir.D08G019300 Gossypium hirsutum HOM05D000913 ORTHO05D000687 1.3e-08 62.8 72 45.8
QL08p002131 Quercus lobata HOM05D000913 ORTHO05D000687 1.7e-08 62.4 71 49.3
THA.LOC104798810 Tarenaya hassleriana HOM05D000913 ORTHO05D000687 2.2e-08 62.0 72 48.6
TWI63G0143 Tripterygium wilfordii HOM05D000913 ORTHO05D000687 2.2e-08 62.0 73 46.6
MD03G1039100 Malus domestica HOM05D000913 ORTHO05D000687 2.9e-08 61.6 71 46.5
Nn5g28777 Nelumbo nucifera HOM05D000913 ORTHO05D000687 2.9e-08 61.6 71 45.1
Cpa.g.sc12.95 Carica papaya HOM05D000913 ORTHO05D000687 3.8e-08 61.2 72 45.8
Duzib268G1311 Durio zibethinus HOM05D000913 ORTHO05D000687 3.8e-08 61.2 72 45.8
Gorai.004G013800 Gossypium raimondii HOM05D000913 ORTHO05D000687 3.8e-08 61.2 72 44.4
Prupe.6G030400 Prunus persica HOM05D000913 ORTHO05D000687 3.8e-08 61.2 71 46.5
Sc11g0006740 Simmondsia chinensis HOM05D000913 ORTHO05D000687 3.8e-08 61.2 72 45.8
Nn5g28779 Nelumbo nucifera HOM05D000913 ORTHO05D000687 5.0e-08 60.8 71 43.7
Nn5g28781 Nelumbo nucifera HOM05D000913 ORTHO05D000687 5.0e-08 60.8 71 43.7
QL08p002158 Quercus lobata HOM05D000913 ORTHO05D000687 6.5e-08 60.5 66 48.5
Aa31LG9G9400 Aethionema arabicum HOM05D000913 ORTHO05D000687 8.5e-08 60.1 74 45.9
CiPaw.11G208300 Carya illinoinensis HOM05D000913 ORTHO05D000687 8.5e-08 60.1 72 48.6
Nn5g28780 Nelumbo nucifera HOM05D000913 ORTHO05D000687 8.5e-08 60.1 71 45.1
Oeu049436.1 Olea europaea HOM05D000913 ORTHO05D000687 8.5e-08 60.1 71 43.7
Potri.006G001800 Populus trichocarpa HOM05D000913 ORTHO05D000687 8.5e-08 60.1 71 45.1
Zm00001eb245490 Zea mays HOM05D000913 ORTHO05D000687 8.5e-08 60.1 72 44.4
AT4G05030 Arabidopsis thaliana HOM05D000913 ORTHO05D000687 1.1e-07 59.7 69 49.3
CARHR252500 Cardamine hirsuta HOM05D000913 ORTHO05D000687 1.1e-07 59.7 67 52.2
Haze_09888 Corylus avellana HOM05D000913 ORTHO05D000687 1.1e-07 59.7 71 50.7
FvH4_3g42050 Fragaria vesca HOM05D000913 ORTHO05D000687 1.1e-07 59.7 71 45.1
FAN21G3003 Fragaria x ananassa HOM05D000913 ORTHO05D000687 1.1e-07 59.7 71 46.5
Nn1g07601 Nelumbo nucifera HOM05D000913 ORTHO05D000687 1.1e-07 59.7 72 47.2
Phvul.004G153100 Phaseolus vulgaris HOM05D000913 ORTHO05D000687 1.1e-07 59.7 72 47.2
GSVIVG01014798001 Vitis vinifera HOM05D000913 ORTHO05D000687 1.1e-07 59.7 72 48.6
Actinidia05030 Actinidia chinensis HOM05D000913 ORTHO05D000687 1.5e-07 59.3 72 44.4
Dinv05124 Davidia involucrata HOM05D000913 ORTHO05D000687 1.5e-07 59.3 72 44.4
FAN16G2023 Fragaria x ananassa HOM05D000913 ORTHO05D000687 1.5e-07 59.3 71 46.5
MD03G1038100 Malus domestica HOM05D000913 ORTHO05D000687 1.5e-07 59.3 74 43.2
Oeu049439.1 Olea europaea HOM05D000913 ORTHO05D000687 1.5e-07 59.3 71 43.7
Potri.006G001900 Populus trichocarpa HOM05D000913 ORTHO05D000687 1.5e-07 59.3 71 49.3
EL10Ac2g02868 Beta vulgaris HOM05D000913 ORTHO05D000687 1.9e-07 58.9 72 44.4
CiPaw.01G191500 Carya illinoinensis HOM05D000913 ORTHO05D000687 1.9e-07 58.9 72 48.6
CiPaw.14G082800 Carya illinoinensis HOM05D000913 ORTHO05D000687 1.9e-07 58.9 72 47.2
Duzib170G1090 Durio zibethinus HOM05D000913 ORTHO05D000687 1.9e-07 58.9 72 45.8
RcHm_v2.0_Chr5g0000231 Rosa chinensis HOM05D000913 ORTHO05D000687 1.9e-07 58.9 71 46.5
Hund29698 Selenicereus undatus HOM05D000913 ORTHO05D000687 1.9e-07 58.9 70 47.1
Hund29699 Selenicereus undatus HOM05D000913 ORTHO05D000687 1.9e-07 58.9 70 47.1
Thecc.07G006400 Theobroma cacao HOM05D000913 ORTHO05D000687 1.9e-07 58.9 72 47.2
Thecc.07G019700 Theobroma cacao HOM05D000913 ORTHO05D000687 1.9e-07 58.9 72 45.8
Ciclev10010297m.g Citrus clementina HOM05D000913 ORTHO05D000687 2.5e-07 58.5 74 44.6
Haze_09880 Corylus avellana HOM05D000913 ORTHO05D000687 2.5e-07 58.5 72 48.6
Gorai.009G446400 Gossypium raimondii HOM05D000913 ORTHO05D000687 2.5e-07 58.5 72 47.2
Sabra06G0001900 Salix brachista HOM05D000913 ORTHO05D000687 2.5e-07 58.5 70 44.3
Thecc.07G006200 Theobroma cacao HOM05D000913 ORTHO05D000687 2.5e-07 58.5 72 45.8
AL6G48640 Arabidopsis lyrata HOM05D000913 ORTHO05D000687 3.2e-07 58.2 69 47.8
Carub.0006s3300 Capsella rubella HOM05D000913 ORTHO05D000687 3.2e-07 58.2 69 47.8
Cfa018626 Carpinus fangiana HOM05D000913 ORTHO05D000687 3.2e-07 58.2 69 42.0
Dinv03822 Davidia involucrata HOM05D000913 ORTHO05D000687 3.2e-07 58.2 72 44.4
Dinv03824 Davidia involucrata HOM05D000913 ORTHO05D000687 3.2e-07 58.2 72 45.8
Gohir.A04G009400 Gossypium hirsutum HOM05D000913 ORTHO05D000687 3.2e-07 58.2 72 45.8
MD10G1233300 Malus domestica HOM05D000913 ORTHO05D000687 3.2e-07 58.2 71 45.1
Atru.chr2.3866 Acer truncatum HOM05D000913 ORTHO05D000687 4.2e-07 57.8 72 45.8
Aqoxy4G01749 Aquilegia oxysepala HOM05D000913 ORTHO05D000687 4.2e-07 57.8 71 46.5
RcHm_v2.0_Chr5g0075281 Rosa chinensis HOM05D000913 ORTHO05D000687 4.2e-07 57.8 71 46.5
Dinv10316 Davidia involucrata HOM05D000913 ORTHO05D000687 5.5e-07 57.4 72 47.2
Duzib213G0455 Durio zibethinus HOM05D000913 ORTHO05D000687 5.5e-07 57.4 74 43.2
Gohir.D05G378800 Gossypium hirsutum HOM05D000913 ORTHO05D000687 5.5e-07 57.4 72 44.4
Gorai.004G013900 Gossypium raimondii HOM05D000913 ORTHO05D000687 5.5e-07 57.4 73 43.8
Gorai.N012600 Gossypium raimondii HOM05D000913 ORTHO05D000687 5.5e-07 57.4 72 44.4
MBI15_g37255_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 5.5e-07 57.4 72 41.7
MD10G1233100 Malus domestica HOM05D000913 ORTHO05D000687 5.5e-07 57.4 71 45.1
QL05p066526 Quercus lobata HOM05D000913 ORTHO05D000687 5.5e-07 57.4 67 46.3
QL05p066534 Quercus lobata HOM05D000913 ORTHO05D000687 5.5e-07 57.4 67 46.3
Thecc.09G251800 Theobroma cacao HOM05D000913 ORTHO05D000687 5.5e-07 57.4 72 44.4
VMungo0540G1757 Vigna mungo HOM05D002133 ORTHO05D000687 5.5e-07 57.4 73 43.8
Duzib150G0569 Durio zibethinus HOM05D000913 ORTHO05D000687 7.2e-07 57.0 71 43.7
FAN21G0520 Fragaria x ananassa HOM05D000913 ORTHO05D000687 7.2e-07 57.0 68 47.1
Gohir.A04G008700 Gossypium hirsutum HOM05D000913 ORTHO05D000687 7.2e-07 57.0 72 43.1
Manes.03G137300 Manihot esculenta HOM05D000913 ORTHO05D000687 7.2e-07 57.0 72 48.6
Oeu025980.1 Olea europaea HOM05D000913 ORTHO05D000687 7.2e-07 57.0 72 44.4
Prupe.6G030300 Prunus persica HOM05D000913 ORTHO05D000687 7.2e-07 57.0 72 43.1
Thecc.07G019800 Theobroma cacao HOM05D000913 ORTHO05D000687 7.2e-07 57.0 72 44.4
Cfa004620 Carpinus fangiana HOM05D000913 ORTHO05D000687 9.4e-07 56.6 66 42.4
Duzib268G0261 Durio zibethinus HOM05D000913 ORTHO05D000687 9.4e-07 56.6 69 44.9
Potri.016G002600 Populus trichocarpa HOM05D000913 ORTHO05D000687 9.4e-07 56.6 62 51.6
THA.LOC104806273 Tarenaya hassleriana HOM05D000913 ORTHO05D000687 9.4e-07 56.6 74 47.3
THA.LOC104810216 Tarenaya hassleriana HOM05D000913 ORTHO05D000687 9.4e-07 56.6 74 47.3
A05p43860 Brassica napus HOM05D006073 ORTHO05D007354 1.2e-06 56.2 103 39.8
Gohir.A08G009300 Gossypium hirsutum HOM05D000913 ORTHO05D000687 1.2e-06 56.2 68 47.1
QL05p004858 Quercus lobata HOM05D000913 ORTHO05D000687 1.2e-06 56.2 72 44.4
SalBow8G2374 Salvia bowleyana HOM05D000913 ORTHO05D000687 1.2e-06 56.2 72 45.8
Haze_09886 Corylus avellana HOM05D001067 ORTHO05D000876 1.6e-06 55.8 74 45.9
Duzib213G0838 Durio zibethinus HOM05D000913 ORTHO05D000687 1.6e-06 55.8 64 46.9
Duzib268G1294 Durio zibethinus HOM05D000913 ORTHO05D000687 1.6e-06 55.8 74 43.2
Gorai.009G452700 Gossypium raimondii HOM05D000913 ORTHO05D000687 1.6e-06 55.8 72 41.7
MD11G1204400 Malus domestica HOM05D000913 ORTHO05D000687 1.6e-06 55.8 72 41.7
CiPaw.09G111500 Carya illinoinensis HOM05D000913 ORTHO05D000687 2.1e-06 55.5 69 42.0
ECA233G0390 Erigeron canadensis HOM05D005260 ORTHO05D006390 2.1e-06 55.5 62 48.4
Gohir.D08G019400 Gossypium hirsutum HOM05D000913 ORTHO05D000687 2.1e-06 55.5 73 42.5
MBI16_g31487_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 2.1e-06 55.5 73 38.4
TAR629G0096 Trochodendron aralioides HOM05D000913 ORTHO05D000687 2.1e-06 55.5 63 49.2
Zm00001eb245480 Zea mays HOM05D000913 ORTHO05D000687 2.1e-06 55.5 71 40.8
BcaC01g06654 Brassica carinata HOM05D000913 ORTHO05D000687 2.7e-06 55.1 74 44.6
CANSAT56G2010 Cannabis sativa HOM05D000913 ORTHO05D000687 2.7e-06 55.1 72 45.8
COL.COLO4_09796 Corchorus olitorius HOM05D000913 ORTHO05D000687 2.7e-06 55.1 72 45.8
Haze_23590 Corylus avellana HOM05D000913 ORTHO05D000687 2.7e-06 55.1 69 40.6
Duzib213G0636 Durio zibethinus HOM05D000913 ORTHO05D000687 2.7e-06 55.1 72 41.7
FvH4_3g42110 Fragaria vesca HOM05D000913 ORTHO05D000687 2.7e-06 55.1 71 43.7
Gorai.009G452900 Gossypium raimondii HOM05D000913 ORTHO05D000687 2.7e-06 55.1 72 41.7
Phvul.008G282300 Phaseolus vulgaris HOM05D000913 ORTHO05D000687 2.7e-06 55.1 72 45.8
THA.LOC104815685 Tarenaya hassleriana HOM05D011788 ORTHO05D000687 2.7e-06 55.1 70 47.1
arahy.Tifrunner.gnm1.ann1.EN7GHH Arachis hypogaea HOM05D000913 ORTHO05D000687 3.6e-06 54.7 72 43.1
arahy.Tifrunner.gnm1.ann1.JV1GEI Arachis hypogaea HOM05D000913 ORTHO05D000687 3.6e-06 54.7 72 43.1
Haze_23588 Corylus avellana HOM05D000913 ORTHO05D000687 3.6e-06 54.7 69 42.0
Lalb_Chr22g0353261 Lupinus albus HOM05D000913 ORTHO05D000687 3.6e-06 54.7 72 44.4
Prupe.2G123900 Prunus persica HOM05D000913 ORTHO05D000687 3.6e-06 54.7 72 38.9
Prupe.4G001900 Prunus persica HOM05D000913 ORTHO05D000687 3.6e-06 54.7 68 44.1
Thecc.07G006100 Theobroma cacao HOM05D000913 ORTHO05D000687 3.6e-06 54.7 71 43.7
ATR0751G174 Amborella trichopoda HOM05D000913 ORTHO05D000687 4.7e-06 54.3 72 40.3
CANSAT11G0550 Cannabis sativa HOM05D000913 ORTHO05D000687 4.7e-06 54.3 72 43.1
Cpa.g.sc12.188 Carica papaya HOM05D000913 ORTHO05D000687 4.7e-06 54.3 61 49.2
Gohir.A04G003500 Gossypium hirsutum HOM05D000913 ORTHO05D000687 4.7e-06 54.3 70 38.6
MD11G1039200 Malus domestica HOM05D000913 ORTHO05D000687 4.7e-06 54.3 74 44.6
MD11G1039300 Malus domestica HOM05D000913 ORTHO05D000687 4.7e-06 54.3 71 40.8
PSO017G4708 Papaver somniferum HOM05D000913 ORTHO05D000687 4.7e-06 54.3 73 43.8
PSO573G0012 Papaver somniferum HOM05D000913 ORTHO05D000687 4.7e-06 54.3 73 43.8
CiPaw.11G201200 Carya illinoinensis HOM05D000913 ORTHO05D000687 6.1e-06 53.9 72 43.1
Haze_10216 Corylus avellana HOM05D000913 ORTHO05D000687 6.1e-06 53.9 67 41.8
Migut.M01469 Erythranthe guttata HOM05D000913 ORTHO05D000687 6.1e-06 53.9 72 40.3
FAN16G0947 Fragaria x ananassa HOM05D000913 ORTHO05D000687 6.1e-06 53.9 71 43.7
Gohir.D05G386200 Gossypium hirsutum HOM05D000913 ORTHO05D000687 6.1e-06 53.9 72 40.3
Nitab4.5_0002517g0020 Nicotiana tabacum HOM05D000913 ORTHO05D000687 6.1e-06 53.9 71 42.3
Sabra16G0317700 Salix brachista HOM05D000913 ORTHO05D000687 6.1e-06 53.9 63 47.6
Zm00001eb080210 Zea mays HOM05D000913 ORTHO05D000687 6.1e-06 53.9 71 45.1
BcaB01g02565 Brassica carinata HOM05D000913 ORTHO05D000687 8.0e-06 53.5 74 44.6
CiPaw.09G111400 Carya illinoinensis HOM05D000913 ORTHO05D000687 8.0e-06 53.5 69 40.6
Dinv05335 Davidia involucrata HOM05D000913 ORTHO05D000687 8.0e-06 53.5 70 42.9
Eucgr.L01980 Eucalyptus grandis HOM05D000913 ORTHO05D000687 8.0e-06 53.5 68 45.6
Gohir.A04G003600 Gossypium hirsutum HOM05D000913 ORTHO05D000687 8.0e-06 53.5 72 37.5
Lj2g0027181 Lotus japonicus HOM05D000913 ORTHO05D000687 8.0e-06 53.5 72 41.7
Prupe.4G234800 Prunus persica HOM05D000913 ORTHO05D000687 8.0e-06 53.5 72 38.9
Prupe.6G031000 Prunus persica HOM05D000913 ORTHO05D000687 8.0e-06 53.5 71 42.3
Zm00001eb080170 Zea mays HOM05D000913 ORTHO05D000687 8.0e-06 53.5 72 43.1


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