Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g34161 Brassica carinata HOM05D000975 ORTHO05D000395 4.2e-112 408.7 319 100.0
C07p32050 Brassica napus HOM05D000975 ORTHO05D000395 2.1e-79 300.1 320 82.2
C04p20990 Brassica napus HOM05D000975 ORTHO05D000395 2.3e-78 296.6 320 79.7
A09p40870 Brassica napus HOM05D000975 ORTHO05D000395 2.8e-76 289.7 320 79.4
A09p24380 Brassica napus HOM05D000975 ORTHO05D000395 1.1e-75 287.7 296 69.9
A03p63370 Brassica napus HOM05D000975 ORTHO05D000395 1.5e-74 283.9 327 64.8
A06p23390 Brassica napus HOM05D000975 ORTHO05D000395 7.7e-74 281.6 320 66.6
BcaC03g14229 Brassica carinata HOM05D000975 ORTHO05D003128 2.5e-72 276.6 306 67.0
A06p20340 Brassica napus HOM05D000975 ORTHO05D016126 4.7e-71 272.3 276 84.1
C06p29660 Brassica napus HOM05D000975 ORTHO05D000395 3.1e-67 259.6 270 87.4
C09p43960 Brassica napus HOM05D000975 ORTHO05D000395 4.5e-66 255.8 270 71.1
A01p28030 Brassica napus HOM05D000975 ORTHO05D000395 8.0e-63 245.0 334 64.7
A01p33220 Brassica napus HOM05D000975 ORTHO05D000395 3.0e-62 243.0 311 53.4
A07p05600 Brassica napus HOM05D000975 ORTHO05D003128 3.3e-61 239.6 334 68.3
A08p09910 Brassica napus HOM05D000975 ORTHO05D003128 4.4e-61 239.2 349 53.0
A07p02230 Brassica napus HOM05D000975 ORTHO05D016126 2.2e-60 236.9 349 53.3
A02p27520 Brassica napus HOM05D000975 ORTHO05D000395 2.8e-60 236.5 334 59.0
A01p29570 Brassica napus HOM05D000975 ORTHO05D016126 6.3e-60 235.3 239 72.0
BcaC04g20351 Brassica carinata HOM05D000975 ORTHO05D003128 1.1e-59 234.6 185 97.8
BcaC02g09151 Brassica carinata HOM05D000975 ORTHO05D003128 1.0e-57 228.0 275 70.2
A10p04870 Brassica napus HOM05D000975 ORTHO05D000395 6.1e-55 218.8 215 69.8
BolC6t38530H Brassica oleracea HOM05D000975 ORTHO05D000395 2.0e-53 213.8 150 79.3
C03p75420 Brassica napus HOM05D000975 ORTHO05D000395 3.4e-53 213.0 126 88.1
C02p44850 Brassica napus HOM05D000975 ORTHO05D000395 4.4e-53 212.6 150 78.0
C04p57170 Brassica napus HOM05D000975 ORTHO05D000395 5.7e-53 212.2 150 78.0
C02p51090 Brassica napus HOM05D000975 ORTHO05D000395 9.8e-53 211.5 126 88.1
C03p87700 Brassica napus HOM05D000975 ORTHO05D000395 1.3e-52 211.1 148 77.0
C02p09990 Brassica napus HOM05D000975 ORTHO05D000395 6.3e-52 208.8 149 77.9
C01p09510 Brassica napus HOM05D000975 ORTHO05D000395 8.3e-52 208.4 106 98.1
BolC9t57334H Brassica oleracea HOM05D000975 ORTHO05D000395 8.3e-52 208.4 150 76.7
A07p22650 Brassica napus HOM05D000975 ORTHO05D000395 1.1e-51 208.0 150 76.0
BraA02t07782Z Brassica rapa HOM05D000975 ORTHO05D000395 1.1e-51 208.0 150 76.0
BraA08t32985Z Brassica rapa HOM05D000975 ORTHO05D000395 1.1e-51 208.0 150 76.0
A03p68250 Brassica napus HOM05D000975 ORTHO05D000395 1.4e-51 207.6 151 75.5
A03p63720 Brassica napus HOM05D000975 ORTHO05D000395 1.8e-51 207.2 126 85.7
A09p29840 Brassica napus HOM05D000975 ORTHO05D000395 1.8e-51 207.2 126 85.7
BraA09t37349Z Brassica rapa HOM05D000975 ORTHO05D000395 1.8e-51 207.2 126 85.7
BraA02t07024Z Brassica rapa HOM05D000975 ORTHO05D000395 2.4e-51 206.8 150 75.3
A05p27710 Brassica napus HOM05D000975 ORTHO05D000395 3.1e-51 206.5 150 75.3
A09p31750 Brassica napus HOM05D000975 ORTHO05D000395 4.1e-51 206.1 150 75.3
C07p07370 Brassica napus HOM05D000975 ORTHO05D000395 4.1e-51 206.1 106 96.2
BraA09t39579Z Brassica rapa HOM05D000975 ORTHO05D000395 4.1e-51 206.1 150 75.3
BraA09t38305Z Brassica rapa HOM05D000975 ORTHO05D000395 5.4e-51 205.7 150 75.3
C02p32290 Brassica napus HOM05D000975 ORTHO05D000395 1.6e-50 204.1 146 76.7
A06p33000 Brassica napus HOM05D000975 ORTHO05D003128 2.0e-50 203.8 106 94.3
C01p40920 Brassica napus HOM05D000975 ORTHO05D000395 2.7e-50 203.4 229 93.9
BraA01t03080Z Brassica rapa HOM05D000975 ORTHO05D000395 2.7e-50 203.4 126 84.9
A06p44600 Brassica napus HOM05D000975 ORTHO05D000395 4.5e-50 202.6 106 93.4
A07p03510 Brassica napus HOM05D000975 ORTHO05D000395 7.7e-50 201.8 104 95.2
BraA02t07585Z Brassica rapa HOM05D000975 ORTHO05D000395 1.0e-49 201.4 150 74.7
A08p14780 Brassica napus HOM05D000975 ORTHO05D000395 1.3e-49 201.1 105 93.3
A01p14480 Brassica napus HOM05D000975 ORTHO05D016126 3.0e-46 189.9 270 55.2
C07p26110 Brassica napus HOM05D000975 ORTHO05D000395 6.8e-46 188.7 249 79.5
BcaC06g36140 Brassica carinata HOM05D000975 ORTHO05D000395 2.2e-44 183.7 170 62.4
BraA06t25605Z Brassica rapa HOM05D000975 ORTHO05D000395 6.3e-44 182.2 135 73.3
BolC5t33488H Brassica oleracea HOM05D000975 ORTHO05D000395 2.0e-42 177.2 129 75.2
C08p14270 Brassica napus HOM05D000975 ORTHO05D097954 2.5e-40 170.2 213 92.0
C09p26440 Brassica napus HOM05D000975 ORTHO05D016126 5.6e-40 169.1 213 86.9
BcaB01g01115 Brassica carinata HOM05D000975 ORTHO05D003128 9.5e-40 168.3 107 75.7
A06p27600 Brassica napus HOM05D000975 ORTHO05D000395 1.4e-38 164.5 125 72.0
A03p57790 Brassica napus HOM05D000975 ORTHO05D016126 5.7e-37 159.1 213 81.7
BcaB04g18231 Brassica carinata HOM05D000975 ORTHO05D000421 1.7e-36 157.5 105 74.3
BcaC04g22080 Brassica carinata HOM05D000975 ORTHO05D003128 6.6e-33 145.6 130 60.0
BcaC02g11384 Brassica carinata HOM05D000975 ORTHO05D000395 8.6e-33 145.2 110 66.4
BcaC04g20796 Brassica carinata HOM05D000975 ORTHO05D000395 8.6e-33 145.2 110 67.3
BcaC02g10515 Brassica carinata HOM05D000975 ORTHO05D003128 1.5e-32 144.4 112 64.3
C04p28020 Brassica napus HOM05D000975 ORTHO05D003128 1.9e-32 144.1 135 57.0
C09p33340 Brassica napus HOM05D000975 ORTHO05D000395 2.5e-32 143.7 135 57.0
C09p23720 Brassica napus HOM05D000975 ORTHO05D000395 3.3e-32 143.3 112 64.3
C09p39110 Brassica napus HOM05D000975 ORTHO05D000395 3.3e-32 143.3 109 67.0
BolC7t41598H Brassica oleracea HOM05D000975 ORTHO05D000395 3.3e-32 143.3 112 64.3
BolC9t56791H Brassica oleracea HOM05D000975 ORTHO05D000395 3.3e-32 143.3 109 67.0
BcaB01g00462 Brassica carinata HOM05D000975 ORTHO05D000395 4.3e-32 142.9 110 65.5
C07p25800 Brassica napus HOM05D000975 ORTHO05D003128 4.3e-32 142.9 112 63.4
BcaC02g10880 Brassica carinata HOM05D000975 ORTHO05D000421 7.3e-32 142.1 116 62.9
BcaC06g35755 Brassica carinata HOM05D000975 ORTHO05D003128 9.5e-32 141.7 109 66.1
C04p36640 Brassica napus HOM05D000975 ORTHO05D000395 2.8e-31 140.2 109 63.3
BolC2t08855H Brassica oleracea HOM05D000975 ORTHO05D000395 3.6e-31 139.8 121 59.5
C02p22590 Brassica napus HOM05D000975 ORTHO05D000395 6.2e-31 139.0 130 56.9
BolC4t25158H Brassica oleracea HOM05D000975 ORTHO05D000395 6.2e-31 139.0 133 56.4
BolC2t08412H Brassica oleracea HOM05D000975 ORTHO05D000395 8.0e-31 138.7 130 57.7
BolC9t55297H Brassica oleracea HOM05D000975 ORTHO05D000395 1.0e-30 138.3 128 57.8
BcaC03g14807 Brassica carinata HOM05D000975 ORTHO05D000395 1.8e-30 137.5 109 63.3
C02p28110 Brassica napus HOM05D000975 ORTHO05D003128 1.8e-30 137.5 109 63.3
BolC6t37336H Brassica oleracea HOM05D000975 ORTHO05D000395 2.3e-30 137.1 127 58.3
C01p26870 Brassica napus HOM05D000975 ORTHO05D000421 5.2e-30 136.0 108 63.0
C07p21350 Brassica napus HOM05D000975 ORTHO05D000395 6.8e-30 135.6 109 61.5
BcaB04g18228 Brassica carinata HOM05D000975 ORTHO05D003128 1.4e-27 127.9 80 73.8
BcaB05g21808 Brassica carinata HOM05D000975 ORTHO05D003128 5.4e-27 125.9 105 62.9
BcaC06g34841 Brassica carinata HOM05D000975 ORTHO05D000395 7.8e-26 122.1 94 64.9
C09p28670 Brassica napus HOM05D000975 ORTHO05D012203 2.3e-25 120.6 242 46.3
C07p11520 Brassica napus HOM05D000975 ORTHO05D012203 6.6e-25 119.0 235 43.4
C03p75410 Brassica napus HOM05D000975 ORTHO05D012203 4.3e-24 116.3 116 78.4
BolC9t56171H Brassica oleracea HOM05D000975 ORTHO05D000395 9.5e-24 115.2 95 61.1
BolC4t25133H Brassica oleracea HOM05D000975 ORTHO05D000395 1.2e-23 114.8 95 61.1
BcaC09g49096 Brassica carinata HOM05D000975 ORTHO05D000395 4.0e-22 109.8 84 63.1
BolC4t24346H Brassica oleracea HOM05D000975 ORTHO05D000421 6.8e-22 109.0 90 62.2
BcaC04g21308 Brassica carinata HOM05D000975 ORTHO05D000395 4.4e-21 106.3 90 61.1
A08p14790 Brassica napus HOM05D000975 ORTHO05D016126 5.8e-21 105.9 119 75.6
A03p64290 Brassica napus HOM05D000975 ORTHO05D016126 9.8e-21 105.1 237 41.4
BraA09t38548Z Brassica rapa HOM05D000975 ORTHO05D000395 1.4e-19 101.3 67 77.6
BolC9t55545H Brassica oleracea HOM05D000975 ORTHO05D000395 4.1e-19 99.8 90 65.6
BcaC04g22996 Brassica carinata HOM05D000975 ORTHO05D000395 4.6e-18 96.3 89 64.0
BcaC05g25477 Brassica carinata HOM05D000975 ORTHO05D003128 7.8e-18 95.5 112 45.5
BcaB03g16068 Brassica carinata HOM05D000975 ORTHO05D003128 1.7e-17 94.4 112 44.6
A05p27740 Brassica napus HOM05D000975 ORTHO05D000395 5.1e-17 92.8 116 41.4
BcaC03g15679 Brassica carinata HOM05D000975 ORTHO05D003128 8.6e-17 92.0 63 66.7
C02p32280 Brassica napus HOM05D000975 ORTHO05D003128 2.5e-16 90.5 95 80.0
C07p07340 Brassica napus HOM05D000975 ORTHO05D000395 4.3e-16 89.7 112 41.1
A09p31720 Brassica napus HOM05D000975 ORTHO05D000395 7.3e-16 89.0 112 41.1
A01p29590 Brassica napus HOM05D000975 ORTHO05D000395 9.5e-16 88.6 112 41.1
A07p02250 Brassica napus HOM05D000975 ORTHO05D003128 9.5e-16 88.6 112 41.1
C07p11490 Brassica napus HOM05D000975 ORTHO05D000395 9.5e-16 88.6 112 40.2
A01p28010 Brassica napus HOM05D000975 ORTHO05D003128 1.2e-15 88.2 116 39.7
A06p21900 Brassica napus HOM05D000975 ORTHO05D003128 1.2e-15 88.2 116 39.7
C02p45160 Brassica napus HOM05D000975 ORTHO05D000395 1.2e-15 88.2 112 40.2
BraA07t28292Z Brassica rapa HOM05D000975 ORTHO05D016126 1.2e-15 88.2 193 45.1
BcaB08g35181 Brassica carinata HOM05D000975 ORTHO05D003128 1.6e-15 87.8 120 40.0
A01p33200 Brassica napus HOM05D000975 ORTHO05D000395 1.6e-15 87.8 112 41.1
A02p27510 Brassica napus HOM05D000975 ORTHO05D000395 1.6e-15 87.8 112 41.1
A03p63350 Brassica napus HOM05D000975 ORTHO05D000395 1.6e-15 87.8 112 41.1
BraA03t14846Z Brassica rapa HOM05D000975 ORTHO05D000395 1.6e-15 87.8 116 39.7
C02p32260 Brassica napus HOM05D000975 ORTHO05D000395 2.1e-15 87.4 112 40.2
A06p20320 Brassica napus HOM05D000975 ORTHO05D000395 3.6e-15 86.7 112 40.2
C01p40940 Brassica napus HOM05D000975 ORTHO05D000395 3.6e-15 86.7 112 40.2
C04p20970 Brassica napus HOM05D000975 ORTHO05D000395 4.7e-15 86.3 112 40.2
C07p26080 Brassica napus HOM05D000975 ORTHO05D000395 4.7e-15 86.3 112 40.2
C09p26460 Brassica napus HOM05D000975 ORTHO05D000395 4.7e-15 86.3 112 40.2
C04p57190 Brassica napus HOM05D000975 ORTHO05D003128 6.2e-15 85.9 112 40.2
A06p23370 Brassica napus HOM05D000975 ORTHO05D000395 8.1e-15 85.5 112 40.2
BolC4t25671H Brassica oleracea HOM05D000975 ORTHO05D000395 8.1e-15 85.5 75 53.3
BraA03t15342Z Brassica rapa HOM05D000975 ORTHO05D000395 8.1e-15 85.5 112 39.3
C02p51060 Brassica napus HOM05D000975 ORTHO05D000395 1.4e-14 84.7 106 40.6
A03p64300 Brassica napus HOM05D000975 ORTHO05D000395 2.3e-14 84.0 112 39.3
A09p24170 Brassica napus HOM05D000975 ORTHO05D000395 2.3e-14 84.0 112 39.3
C02p44870 Brassica napus HOM05D000975 ORTHO05D000395 4.0e-14 83.2 112 39.3
BolC6t35808H Brassica oleracea HOM05D000975 ORTHO05D000395 4.0e-14 83.2 49 73.5
BcaC05g27533 Brassica carinata HOM05D000975 ORTHO05D003128 8.9e-14 82.0 105 45.7
BraA09t38014Z Brassica rapa HOM05D000975 ORTHO05D016126 4.4e-13 79.7 43 95.3
BcaB03g16444 Brassica carinata HOM05D000975 ORTHO05D003128 7.6e-13 79.0 109 38.5
BcaB03g16257 Brassica carinata HOM05D000975 ORTHO05D003128 9.9e-13 78.6 103 44.7
C04p51470 Brassica napus HOM05D000975 ORTHO05D000395 9.9e-13 78.6 49 69.4
BolC2t09401H Brassica oleracea HOM05D000975 ORTHO05D000395 3.7e-12 76.6 73 54.8
BcaC06g36141 Brassica carinata HOM05D000975 ORTHO05D003128 6.4e-12 75.9 119 37.0
Carub.0002s0847 Capsella rubella HOM05D000975 ORTHO05D000395 8.4e-12 75.5 132 34.1
Carub.0027s0001 Capsella rubella HOM05D000975 ORTHO05D000395 8.4e-12 75.5 132 34.1
BcaC08g44256 Brassica carinata HOM05D000975 ORTHO05D003128 1.4e-11 74.7 95 40.0
Sp5g20850 Schrenkiella parvula HOM05D000975 ORTHO05D023631 1.4e-11 74.7 103 36.9
Thhalv10011091m.g Eutrema salsugineum HOM05D000975 ORTHO05D000395 3.2e-11 73.6 118 33.1
A06p21920 Brassica napus HOM05D000975 ORTHO05D012203 5.4e-11 72.8 116 41.4
BcaB01g01398 Brassica carinata HOM05D000975 ORTHO05D003128 7.1e-11 72.4 103 39.8
BcaB08g35626 Brassica carinata HOM05D000975 ORTHO05D003128 1.2e-10 71.6 104 42.3
C02p45190 Brassica napus HOM05D000975 ORTHO05D099179 2.1e-10 70.9 119 52.1
Thhalv10003375m.g Eutrema salsugineum HOM05D000975 ORTHO05D000395 2.7e-10 70.5 119 31.9
A05p09970 Brassica napus HOM05D000975 ORTHO05D016126 7.8e-10 68.9 102 44.1
C05p35130 Brassica napus HOM05D000975 ORTHO05D000395 1.3e-09 68.2 43 65.1
C04p36230 Brassica napus HOM05D000975 ORTHO05D000395 3.9e-09 66.6 41 70.7
A06p27610 Brassica napus HOM05D000975 ORTHO05D012203 8.6e-09 65.5 116 50.9
Carub.0006s2616 Capsella rubella HOM05D000975 ORTHO05D000395 8.6e-09 65.5 131 30.5
AL7G47240 Arabidopsis lyrata HOM05D000975 ORTHO05D000395 1.1e-08 65.1 91 38.5
Thhalv10028257m.g Eutrema salsugineum HOM05D000975 ORTHO05D000395 1.5e-08 64.7 111 31.5
AL8G29070 Arabidopsis lyrata HOM05D000975 ORTHO05D000395 1.9e-08 64.3 66 48.5
BcaC08g44255 Brassica carinata HOM05D000975 ORTHO05D012203 4.3e-08 63.2 115 47.8
C09p13190 Brassica napus HOM05D000975 ORTHO05D003128 5.6e-08 62.8 98 74.5
BolC7t41152H Brassica oleracea HOM05D000975 ORTHO05D000395 5.6e-08 62.8 81 39.5
BcaB07g33059 Brassica carinata HOM05D000975 ORTHO05D003128 7.3e-08 62.4 43 74.4
BcaC02g09150 Brassica carinata HOM05D000975 ORTHO05D003128 7.3e-08 62.4 89 36.0
BcaC06g34163 Brassica carinata HOM05D000975 ORTHO05D003128 7.3e-08 62.4 89 36.0
BolC4t25468H Brassica oleracea HOM05D000975 ORTHO05D012203 7.3e-08 62.4 64 54.7
BolC6t38531H Brassica oleracea HOM05D000975 ORTHO05D012203 7.3e-08 62.4 64 54.7
BraA04t17237Z Brassica rapa HOM05D000975 ORTHO05D000395 1.2e-07 61.6 87 36.8
A07p03470 Brassica napus HOM05D000975 ORTHO05D000395 2.1e-07 60.8 91 37.4
A08p14800 Brassica napus HOM05D000975 ORTHO05D000395 2.1e-07 60.8 87 36.8
Thhalv10012309m.g Eutrema salsugineum HOM05D000975 ORTHO05D000395 2.1e-07 60.8 63 41.3
Thhalv10023812m.g Eutrema salsugineum HOM05D000975 ORTHO05D000395 4.7e-07 59.7 57 42.1
Thhalv10022492m.g Eutrema salsugineum HOM05D000975 ORTHO05D000395 6.2e-07 59.3 62 45.2
BcaC04g22998 Brassica carinata HOM05D000975 ORTHO05D000395 1.1e-06 58.5 77 39.0
C05p33160 Brassica napus HOM05D000975 ORTHO05D000395 1.1e-06 58.5 82 36.6
Sp3g20490 Schrenkiella parvula HOM05D000592 ORTHO05D001485 1.1e-06 58.5 33 81.8
AT3G22790 Arabidopsis thaliana HOM05D000592 ORTHO05D001485 1.8e-06 57.8 36 72.2
BcaB03g16188 Brassica carinata HOM05D000975 ORTHO05D003128 3.1e-06 57.0 89 38.2
C01p41560 Brassica napus HOM05D000592 ORTHO05D001485 4.0e-06 56.6 34 85.3
BolC1t04110H Brassica oleracea HOM05D000592 ORTHO05D001485 4.0e-06 56.6 34 85.3
BolC3t21087H Brassica oleracea HOM05D000975 ORTHO05D000395 5.2e-06 56.2 50 48.0
BraA02t07023Z Brassica rapa HOM05D000975 ORTHO05D003128 6.8e-06 55.8 64 51.6
Carub.0003s2291 Capsella rubella HOM05D000592 ORTHO05D001485 6.8e-06 55.8 36 69.4
Thhalv10019883m.g Eutrema salsugineum HOM05D000592 ORTHO05D001485 6.8e-06 55.8 33 78.8
AL3G37110 Arabidopsis lyrata HOM05D000592 ORTHO05D001485 8.9e-06 55.5 36 69.4
BcaB07g33020 Brassica carinata HOM05D000975 ORTHO05D000421 8.9e-06 55.5 45 64.4
BcaC09g48471 Brassica carinata HOM05D000975 ORTHO05D039383 8.9e-06 55.5 26 100.0
BcaNung04170 Brassica carinata HOM05D000975 ORTHO05D003128 8.9e-06 55.5 26 100.0
A05p25950 Brassica napus HOM05D000592 ORTHO05D001485 8.9e-06 55.5 32 84.4
BraA01t03373Z Brassica rapa HOM05D000592 ORTHO05D001485 8.9e-06 55.5 34 82.4
BraA05t21480Z Brassica rapa HOM05D000592 ORTHO05D001485 8.9e-06 55.5 32 84.4


User provided reference genes

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