Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g34159 Brassica carinata HOM05D009799 ORTHO05D009939 9.1e-56 219.9 106 100.0
C07p32070 Brassica napus HOM05D009799 ORTHO05D009939 1.3e-54 216.1 106 98.1
A06p44390 Brassica napus HOM05D009799 ORTHO05D009939 1.4e-51 206.1 106 93.4
BraA06t27313Z Brassica rapa HOM05D009799 ORTHO05D009939 1.1e-48 196.4 107 89.7
BolC7t43746H Brassica oleracea HOM05D009799 ORTHO05D009939 3.5e-47 191.4 107 87.9
BcaC06g31297 Brassica carinata HOM05D009799 ORTHO05D009939 2.6e-42 175.3 106 83.0
BraA09t37943Z Brassica rapa HOM05D009799 ORTHO05D009939 9.5e-37 156.8 107 76.6
BcaC03g17045 Brassica carinata HOM05D009799 ORTHO05D009939 6.8e-35 150.6 108 70.4
C02p49600 Brassica napus HOM05D009799 ORTHO05D009939 6.8e-35 150.6 108 70.4
BcaC04g21579 Brassica carinata HOM05D009799 ORTHO05D009939 1.2e-34 149.8 107 72.9
C09p30170 Brassica napus HOM05D009799 ORTHO05D009939 1.2e-34 149.8 107 72.9
BolC9t55883H Brassica oleracea HOM05D009799 ORTHO05D009939 1.2e-34 149.8 107 72.9
BcaB07g30740 Brassica carinata HOM05D009799 ORTHO05D009939 2.0e-34 149.1 107 72.0
BolC2t11039H Brassica oleracea HOM05D009799 ORTHO05D009939 2.6e-34 148.7 108 69.4
Sp2g12960 Schrenkiella parvula HOM05D009799 ORTHO05D009939 8.3e-33 143.7 110 67.3
A02p32070 Brassica napus HOM05D009799 ORTHO05D009939 1.1e-32 143.3 109 68.8
BraA02t08219Z Brassica rapa HOM05D009799 ORTHO05D009939 1.1e-32 143.3 109 68.8
CARHR144060 Cardamine hirsuta HOM05D009799 ORTHO05D009939 9.8e-26 120.2 111 58.6
A09p23430 Brassica napus HOM05D009799 ORTHO05D009939 2.2e-25 119.0 76 77.6
AT2G01505 Arabidopsis thaliana HOM05D009799 ORTHO05D009939 1.9e-24 115.9 103 61.2
AL5G10500 Arabidopsis lyrata HOM05D009799 ORTHO05D009939 1.0e-22 110.2 113 56.6
Carub.0005s0047 Capsella rubella HOM05D009799 ORTHO05D009939 8.1e-20 100.5 116 52.6
Aa31LG2G8410 Aethionema arabicum HOM05D009799 ORTHO05D009939 3.4e-18 95.1 122 51.6
BcaB07g30393 Brassica carinata HOM05D009799 ORTHO05D009939 1.7e-17 92.8 65 70.8
Thecc.02G283700 Theobroma cacao HOM05D009151 ORTHO05D009939 6.8e-11 70.9 108 42.6
Hma1.2p1_0096F.1_g047660 Hydrangea macrophylla HOM05D009151 ORTHO05D009939 2.2e-09 65.9 87 42.5
Atru.chr11.466 Acer truncatum HOM05D009151 ORTHO05D009939 6.4e-09 64.3 86 40.7
Cc11_g08430 Coffea canephora HOM05D014752 ORTHO05D009939 2.4e-08 62.4 103 39.8
Sopen04g002830 Solanum pennellii HOM05D009799 ORTHO05D009939 2.4e-08 62.4 99 39.4
Ciclev10017256m.g Citrus clementina HOM05D009151 ORTHO05D009939 4.1e-08 61.6 105 37.1
Manes.15G129400 Manihot esculenta HOM05D009151 ORTHO05D009939 2.1e-07 59.3 95 40.0
Oeu003376.1 Olea europaea HOM05D014752 ORTHO05D009939 7.8e-07 57.4 83 38.6
RcHm_v2.0_Chr4g0441591 Rosa chinensis HOM05D009151 ORTHO05D009939 7.8e-07 57.4 100 36.0
Gohir.A03G120200 Gossypium hirsutum HOM05D009151 ORTHO05D009939 5.1e-06 54.7 97 42.3
CiPaw.05G195900 Carya illinoinensis HOM05D009151 ORTHO05D009939 6.6e-06 54.3 100 37.0
CiPaw.06G047100 Carya illinoinensis HOM05D009151 ORTHO05D009939 6.6e-06 54.3 94 38.3
Gohir.D02G143366 Gossypium hirsutum HOM05D009151 ORTHO05D009939 6.6e-06 54.3 97 41.2
AL2G30400 Arabidopsis lyrata HOM05D010624 ORTHO05D012738 8.6e-06 53.9 105 39.0
AT1G70895 Arabidopsis thaliana HOM05D010624 ORTHO05D012738 8.6e-06 53.9 101 38.6
Thhalv10019376m.g Eutrema salsugineum HOM05D010624 ORTHO05D012738 8.6e-06 53.9 102 36.3
Gohir.D12G154600 Gossypium hirsutum HOM05D009151 ORTHO05D009939 8.6e-06 53.9 92 38.0


User provided reference genes

Program Settings