Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g34074 Brassica carinata HOM05D010973 ORTHO05D014088 1.8e-57 225.7 117 100.0
BcaC06g34075 Brassica carinata HOM05D010973 ORTHO05D014088 2.3e-36 155.6 98 86.7
BcaC06g34072 Brassica carinata HOM05D010973 ORTHO05D014088 6.8e-36 154.1 158 57.6
BolC7t43813H Brassica oleracea HOM05D010973 ORTHO05D014088 7.5e-35 150.6 95 85.3
BcaC05g26903 Brassica carinata HOM05D010973 ORTHO05D014088 4.1e-33 144.8 103 76.7
BolC5t31476H Brassica oleracea HOM05D010973 ORTHO05D014088 7.3e-30 134.0 98 80.6
BcaC03g13719 Brassica carinata HOM05D010973 ORTHO05D014088 4.4e-27 124.8 72 91.7
C09p49360 Brassica napus HOM05D010973 ORTHO05D014088 4.4e-27 124.8 72 91.7
BolC9t57788H Brassica oleracea HOM05D010973 ORTHO05D014088 4.4e-27 124.8 72 91.7
C05p27560 Brassica napus HOM05D010973 ORTHO05D014088 7.5e-27 124.0 72 93.1
C02p25290 Brassica napus HOM05D010973 ORTHO05D014088 3.2e-25 118.6 77 83.1
BcaC07g38975 Brassica carinata HOM05D010973 ORTHO05D014088 5.6e-22 107.8 62 91.9
C08p19170 Brassica napus HOM05D010973 ORTHO05D014088 5.6e-22 107.8 62 91.9
C02p31140 Brassica napus HOM05D010973 ORTHO05D014088 8.0e-21 104.0 81 75.3
BcaB03g13985 Brassica carinata HOM05D010973 ORTHO05D014088 1.1e-17 93.6 83 69.9
Thhalv10011596m.g Eutrema salsugineum HOM05D002316 ORTHO05D002280 4.6e-16 88.2 82 58.5
Aa31LG10G1890 Aethionema arabicum HOM05D002316 ORTHO05D002280 1.1e-14 83.6 89 48.3
C06p09030 Brassica napus HOM05D002316 ORTHO05D002280 1.9e-14 82.8 81 60.5
A06p01090 Brassica napus HOM05D002316 ORTHO05D002280 3.3e-14 82.0 72 65.3
BraA06t23336Z Brassica rapa HOM05D002316 ORTHO05D002280 3.3e-14 82.0 72 65.3
BcaC08g43517 Brassica carinata HOM05D002316 ORTHO05D002280 5.6e-14 81.3 81 59.3
BolC6t35981H Brassica oleracea HOM05D002316 ORTHO05D002280 5.6e-14 81.3 81 59.3
AL1G61670 Arabidopsis lyrata HOM05D002316 ORTHO05D002280 7.3e-14 80.9 71 62.0
Sp1g39830 Schrenkiella parvula HOM05D002316 ORTHO05D002280 6.8e-12 74.3 100 46.0
C03p91300 Brassica napus HOM05D002316 ORTHO05D002280 4.4e-11 71.6 84 60.7
BcaB04g17097 Brassica carinata HOM05D002316 ORTHO05D002280 7.5e-11 70.9 120 48.3
BcaC01g01372 Brassica carinata HOM05D002316 ORTHO05D002280 1.3e-10 70.1 84 59.5
Solyc12g014220.3 Solanum lycopersicum HOM05D002316 ORTHO05D002280 1.3e-10 70.1 70 52.9
BolC3t21445H Brassica oleracea HOM05D002316 ORTHO05D002280 2.2e-10 69.3 84 59.5
BraA08t32224Z Brassica rapa HOM05D002316 ORTHO05D002280 2.2e-10 69.3 78 61.5
CAN.G292.5 Capsicum annuum HOM05D002316 ORTHO05D002280 2.2e-10 69.3 97 41.2
Sopen12g006010 Solanum pennellii HOM05D002316 ORTHO05D002280 4.9e-10 68.2 70 50.0
Cpa.g.sc131.59 Carica papaya HOM05D002316 ORTHO05D002280 1.1e-09 67.0 81 49.4
Peaxi162Scf00934g00148 Petunia axillaris HOM05D002316 ORTHO05D002280 1.1e-09 67.0 83 44.6
PGSC0003DMG400015334 Solanum tuberosum HOM05D002316 ORTHO05D002280 1.9e-09 66.2 70 50.0
Lj8A150T53 Lonicera japonica HOM05D002316 ORTHO05D002280 2.4e-09 65.9 94 41.5
Nitab4.5_0000035g0100 Nicotiana tabacum HOM05D002316 ORTHO05D002280 7.1e-09 64.3 64 53.1
AT1G53250 Arabidopsis thaliana HOM05D002316 ORTHO05D002280 9.2e-09 63.9 53 62.3
Carub.0001s4244 Capsella rubella HOM05D002316 ORTHO05D002280 2.1e-08 62.8 60 56.7
GSVIVG01014224001 Vitis vinifera HOM05D002316 ORTHO05D002280 2.1e-08 62.8 79 48.1
A08p01710 Brassica napus HOM05D002316 ORTHO05D002280 2.7e-08 62.4 70 58.6
Dinv14972 Davidia involucrata HOM05D002316 ORTHO05D002280 6.0e-08 61.2 78 41.0
Nitab4.5_0005440g0080 Nicotiana tabacum HOM05D002316 ORTHO05D002280 1.0e-07 60.5 64 50.0
Nn1g09090 Nelumbo nucifera HOM05D002316 ORTHO05D002280 1.3e-07 60.1 67 47.8
Lsat_1_v5_gn_5_127320 Lactuca sativa HOM05D000043 ORTHO05D009639 2.3e-07 59.3 74 43.2
Thecc.07G106400 Theobroma cacao HOM05D002316 ORTHO05D002280 3.0e-07 58.9 75 45.3
Gohir.D13G153100 Gossypium hirsutum HOM05D002316 ORTHO05D002280 5.1e-07 58.2 81 42.0
Gorai.013G173000 Gossypium raimondii HOM05D002316 ORTHO05D002280 5.1e-07 58.2 81 42.0
CARHR043490 Cardamine hirsuta HOM05D002316 ORTHO05D002280 6.6e-07 57.8 97 41.2
COL.COLO4_17596 Corchorus olitorius HOM05D002316 ORTHO05D002280 6.6e-07 57.8 56 51.8
MBI06_g25991_MAGBIO Magnolia biondii HOM05D002316 ORTHO05D002280 6.6e-07 57.8 116 38.8
CSS0043472 Camellia sinensis var. sinensis HOM05D002316 ORTHO05D002280 8.6e-07 57.4 83 41.0
Gohir.A13G148550 Gossypium hirsutum HOM05D002316 ORTHO05D002280 1.1e-06 57.0 75 44.0
Manes.02G100500 Manihot esculenta HOM05D002316 ORTHO05D002280 1.1e-06 57.0 75 41.3
ECA234G4357 Erigeron canadensis HOM05D002316 ORTHO05D002280 1.5e-06 56.6 85 35.3
Duzib213G0315 Durio zibethinus HOM05D002316 ORTHO05D002280 3.3e-06 55.5 70 44.3
PSO782G0144 Papaver somniferum HOM05D002478 ORTHO05D002280 3.3e-06 55.5 73 45.2
DCAR_017163 Daucus carota HOM05D002316 ORTHO05D002280 4.3e-06 55.1 76 40.8
Duzib213G0761 Durio zibethinus HOM05D002316 ORTHO05D002280 4.3e-06 55.1 72 44.4
EL10Ac4g08303 Beta vulgaris HOM05D002316 ORTHO05D002280 5.6e-06 54.7 70 41.4
AUR62038474 Chenopodium quinoa HOM05D002316 ORTHO05D002280 9.5e-06 53.9 97 33.0


User provided reference genes

Program Settings