Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g34058 Brassica carinata HOM05D001086 ORTHO05D009904 1.0e-51 206.5 104 100.0
BcaC02g09318 Brassica carinata HOM05D001086 ORTHO05D009904 5.8e-47 190.7 99 96.0
BcaC03g13592 Brassica carinata HOM05D001086 ORTHO05D009904 5.8e-47 190.7 99 96.0
BcaC03g17428 Brassica carinata HOM05D001086 ORTHO05D009904 5.8e-47 190.7 99 96.0
BcaC08g43966 Brassica carinata HOM05D001086 ORTHO05D009904 5.8e-47 190.7 99 96.0
BcaC01g03337 Brassica carinata HOM05D001086 ORTHO05D009904 2.2e-46 188.7 99 94.9
BcaC09g49514 Brassica carinata HOM05D001086 ORTHO05D009904 2.2e-46 188.7 99 94.9
BolC4t22507H Brassica oleracea HOM05D001086 ORTHO05D009904 2.3e-43 178.7 101 89.1
BolC1t03658H Brassica oleracea HOM05D001086 ORTHO05D009904 3.0e-43 178.3 92 95.7
BraA08t32231Z Brassica rapa HOM05D001086 ORTHO05D001112 3.3e-42 174.9 93 91.4
BolC7t44295H Brassica oleracea HOM05D001086 ORTHO05D009904 7.3e-42 173.7 94 94.7
BcaB04g18059 Brassica carinata HOM05D001086 ORTHO05D009904 9.6e-42 173.3 100 87.0
BolC6t39064H Brassica oleracea HOM05D001086 ORTHO05D009904 9.0e-40 166.8 91 89.0
BolC4t24924H Brassica oleracea HOM05D001086 ORTHO05D009904 4.2e-37 157.9 85 91.8
BolC3t14117H Brassica oleracea HOM05D001086 ORTHO05D009904 2.7e-36 155.2 99 82.8
BolC1t04057H Brassica oleracea HOM05D001086 ORTHO05D009904 1.3e-33 146.4 74 95.9
BcaB05g22654 Brassica carinata HOM05D001086 ORTHO05D009904 4.0e-32 141.4 86 82.6
BolC9t57564H Brassica oleracea HOM05D001086 ORTHO05D009904 9.3e-29 130.2 99 73.7
BolC4t27683H Brassica oleracea HOM05D001086 ORTHO05D009904 2.1e-28 129.0 67 95.5
BolC2t10559H Brassica oleracea HOM05D001086 ORTHO05D009904 2.1e-25 119.0 62 91.9
BolC9t58218H Brassica oleracea HOM05D001086 ORTHO05D009904 1.8e-24 115.9 67 82.1
BcaB04g18289 Brassica carinata HOM05D001086 ORTHO05D009904 1.9e-21 105.9 84 59.5
BolC5t30470H Brassica oleracea HOM05D001086 ORTHO05D001112 2.5e-21 105.5 62 79.0
BolC9t57792H Brassica oleracea HOM05D001086 ORTHO05D001112 4.2e-21 104.8 85 58.8
BcaC03g15388 Brassica carinata HOM05D001086 ORTHO05D009904 2.7e-20 102.1 72 76.4
Aa31sc688G10 Aethionema arabicum HOM05D001086 ORTHO05D009904 2.3e-19 99.0 86 55.8
BcaC08g43692 Brassica carinata HOM05D001086 ORTHO05D009904 5.1e-19 97.8 81 59.3
BcaC02g11220 Brassica carinata HOM05D001086 ORTHO05D009904 8.7e-19 97.1 91 57.1
BcaB04g17791 Brassica carinata HOM05D001086 ORTHO05D009904 1.1e-18 96.7 84 57.1
BcaB08g35690 Brassica carinata HOM05D001086 ORTHO05D009904 1.1e-18 96.7 84 60.7
Aa31LG2G17950 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.5e-18 96.3 91 53.8
Aa31sc74G60 Aethionema arabicum HOM05D001086 ORTHO05D009904 1.5e-18 96.3 94 54.3
Aa31sc135G30 Aethionema arabicum HOM05D001086 ORTHO05D009904 1.9e-18 95.9 91 51.6
Aa31LG8G12280 Aethionema arabicum HOM05D001086 ORTHO05D009904 2.5e-18 95.5 88 53.4
Aa31sc250G50 Aethionema arabicum HOM05D001086 ORTHO05D009904 3.3e-18 95.1 84 56.0
BolC9t57246H Brassica oleracea HOM05D001086 ORTHO05D009904 4.3e-18 94.7 77 58.4
Aa31sc21G160 Aethionema arabicum HOM05D001086 ORTHO05D009904 9.7e-18 93.6 88 54.5
BcaNung02439 Brassica carinata HOM05D001086 ORTHO05D009904 9.7e-18 93.6 84 56.0
BolC8t50117H Brassica oleracea HOM05D001086 ORTHO05D009904 1.6e-17 92.8 90 54.4
Aa31sc360G20 Aethionema arabicum HOM05D001086 ORTHO05D001112 2.8e-17 92.0 86 51.2
Aa31sc41G60 Aethionema arabicum HOM05D001086 ORTHO05D009904 4.8e-17 91.3 86 53.5
Aa31sc142G50 Aethionema arabicum HOM05D001086 ORTHO05D009904 1.1e-16 90.1 84 52.4
Aa31sc1568G20 Aethionema arabicum HOM05D001086 ORTHO05D009904 2.4e-16 89.0 84 52.4
BolC2t08115H Brassica oleracea HOM05D001086 ORTHO05D009904 2.4e-16 89.0 72 58.3
Aa31sc259G20 Aethionema arabicum HOM05D001086 ORTHO05D009904 4.1e-16 88.2 86 50.0
Aa31LG1G5710 Aethionema arabicum HOM05D001086 ORTHO05D009904 6.9e-16 87.4 88 48.9
Aa31sc309G20 Aethionema arabicum HOM05D001086 ORTHO05D001112 9.0e-16 87.0 97 49.5
Aa31sc1206G10 Aethionema arabicum HOM05D001086 ORTHO05D009904 2.1e-12 75.9 100 46.0
Aa31sc555G60 Aethionema arabicum HOM05D001086 ORTHO05D009904 3.6e-12 75.1 62 58.1
Aa31LG7G11710 Aethionema arabicum HOM05D001086 ORTHO05D009904 2.3e-11 72.4 71 52.1
Aa31sc465G10 Aethionema arabicum HOM05D001086 ORTHO05D009904 2.3e-11 72.4 62 54.8
BcaC04g21846 Brassica carinata HOM05D001086 ORTHO05D009904 3.0e-11 72.0 71 53.5
BcaB02g06425 Brassica carinata HOM05D001086 ORTHO05D009904 6.7e-11 70.9 77 57.1
BcaC03g15312 Brassica carinata HOM05D001086 ORTHO05D009904 1.5e-10 69.7 47 85.1
C02p56970 Brassica napus HOM05D017026 ORTHO05D020016 1.5e-10 69.7 50 62.0
BcaC06g34115 Brassica carinata HOM05D001086 ORTHO05D009904 2.5e-10 68.9 61 67.2
BcaC09g49251 Brassica carinata HOM05D001086 ORTHO05D009904 8.2e-09 63.9 97 40.2
Aa31csc81G60 Aethionema arabicum HOM05D001086 ORTHO05D009904 3.4e-07 58.5 87 46.0
Aa31sc116G30 Aethionema arabicum HOM05D001086 ORTHO05D001112 5.9e-07 57.8 55 50.9
Aa31sc639G60 Aethionema arabicum HOM05D001086 ORTHO05D009904 5.9e-07 57.8 48 56.2
Aa31sc99G90 Aethionema arabicum HOM05D001086 ORTHO05D009904 7.7e-07 57.4 58 53.4


User provided reference genes

Program Settings