Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g33929 Brassica carinata HOM05D002970 ORTHO05D009571 3.9e-157 558.1 293 100.0
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 4.3e-156 554.7 291 99.7
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 2.2e-144 515.8 293 94.2
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 5.3e-138 494.6 282 94.3
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 1.0e-136 490.3 291 89.7
BcaC06g31093 Brassica carinata HOM05D002970 ORTHO05D009571 1.1e-135 486.9 294 89.8
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 7.4e-124 447.6 270 90.0
Thhalv10004665m.g Eutrema salsugineum HOM05D002970 ORTHO05D009571 1.7e-123 446.4 311 79.7
AL5G14780 Arabidopsis lyrata HOM05D002970 ORTHO05D009571 2.8e-123 445.7 305 81.3
Sp2g15280 Schrenkiella parvula HOM05D002970 ORTHO05D009571 1.8e-122 443.0 309 79.9
Carub.0005s0396 Capsella rubella HOM05D002970 ORTHO05D009571 2.0e-121 439.5 302 80.8
CARHR147070 Cardamine hirsuta HOM05D002970 ORTHO05D009571 2.9e-120 435.6 308 77.9
AT3G26085 Arabidopsis thaliana HOM05D002970 ORTHO05D009571 5.2e-109 398.3 263 82.9
THA.LOC104825684 Tarenaya hassleriana HOM05D002970 ORTHO05D009571 1.7e-88 330.1 302 59.3
MD16G1107600 Malus domestica HOM05D002970 ORTHO05D009571 5.4e-82 308.5 295 57.3
Prupe.1G238700 Prunus persica HOM05D002970 ORTHO05D009571 2.5e-79 299.7 269 59.1
QL03p055861 Quercus lobata HOM05D002970 ORTHO05D009571 5.6e-79 298.5 276 57.2
Aa31LG2G6280 Aethionema arabicum HOM05D002970 ORTHO05D009571 3.6e-78 295.8 332 57.8
RcHm_v2.0_Chr4g0432001 Rosa chinensis HOM05D002970 ORTHO05D009571 2.3e-77 293.1 254 61.4
CiPaw.05G175600 Carya illinoinensis HOM05D002970 ORTHO05D009571 3.1e-77 292.7 254 58.3
COL.COLO4_23553 Corchorus olitorius HOM05D002970 ORTHO05D007037 5.2e-77 292.0 265 58.1
Duzib248G1026 Durio zibethinus HOM05D002970 ORTHO05D009571 5.2e-77 292.0 264 58.0
Peaxi162Scf00128g00724 Petunia axillaris HOM05D002970 ORTHO05D009571 5.2e-77 292.0 258 59.3
Ciclev10032228m.g Citrus clementina HOM05D002970 ORTHO05D009571 1.2e-76 290.8 267 58.4
FvH4_4g24960 Fragaria vesca HOM05D002970 ORTHO05D009571 1.5e-76 290.4 253 61.7
FAN17G2692 Fragaria x ananassa HOM05D002970 ORTHO05D009571 1.5e-76 290.4 253 62.1
Potri.008G181400 Populus trichocarpa HOM05D002970 ORTHO05D009571 2.6e-76 289.7 254 59.8
GSVIVG01010294001 Vitis vinifera HOM05D002970 ORTHO05D009571 2.6e-76 289.7 262 58.4
FAN12G3280 Fragaria x ananassa HOM05D002970 ORTHO05D009571 5.8e-76 288.5 253 61.7
CSS0013806 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 9.8e-76 287.7 262 57.6
Ca_17805_v3 Cicer arietinum L. HOM05D002970 ORTHO05D009571 1.3e-75 287.3 250 60.8
Gorai.009G334200 Gossypium raimondii HOM05D002970 ORTHO05D009571 4.9e-75 285.4 263 56.3
Lalb_Chr07g0185611 Lupinus albus HOM05D002970 ORTHO05D009571 6.4e-75 285.0 251 59.8
Atru.BG.282.p Acer truncatum HOM05D002970 ORTHO05D009571 1.4e-74 283.9 191 71.2
Atru.chr11.2205 Acer truncatum HOM05D002970 ORTHO05D009571 7.0e-74 281.6 278 55.4
Phvul.002G257900 Phaseolus vulgaris HOM05D002970 ORTHO05D009571 1.2e-73 280.8 251 59.4
PGSC0003DMG400010736 Solanum tuberosum HOM05D002970 ORTHO05D009571 2.1e-73 280.0 257 57.6
CANSAT01G2975 Cannabis sativa HOM05D002970 ORTHO05D009571 3.5e-73 279.3 250 59.6
MELO3C010711.2 Cucumis melo HOM05D002970 ORTHO05D009571 6.0e-73 278.5 249 59.4
Eucgr.B03232 Eucalyptus grandis HOM05D002970 ORTHO05D009571 7.8e-73 278.1 259 54.4
Gohir.A05G311600 Gossypium hirsutum HOM05D002970 ORTHO05D009571 7.8e-73 278.1 249 57.8
Nitab4.5_0000041g0260 Nicotiana tabacum HOM05D002970 ORTHO05D009571 7.8e-73 278.1 261 57.1
TPR.G6253 Trifolium pratense HOM05D002970 ORTHO05D009571 7.8e-73 278.1 248 58.9
Nitab4.5_0002688g0010 Nicotiana tabacum HOM05D002970 ORTHO05D009571 1.0e-72 277.7 262 56.5
Sopen05g009220 Solanum pennellii HOM05D002970 ORTHO05D009571 2.3e-72 276.6 258 57.4
Thecc.02G269300 Theobroma cacao HOM05D002970 ORTHO05D009571 3.0e-72 276.2 265 55.1
CsaV3_2G025140 Cucumis sativus L. HOM05D002970 ORTHO05D009571 5.1e-72 275.4 252 57.9
PGR102G3027 Punica granatum HOM05D002970 ORTHO05D009571 4.3e-71 272.3 214 64.0
Medtr8g089550 Medicago truncatula HOM05D002970 ORTHO05D009571 5.6e-71 271.9 243 58.0
ECA234G3025 Erigeron canadensis HOM05D002970 ORTHO05D009571 9.5e-71 271.2 262 55.3
SalBow2G2585 Salvia bowleyana HOM05D002970 ORTHO05D009571 9.5e-71 271.2 218 64.2
Manes.12G018300 Manihot esculenta HOM05D002970 ORTHO05D009571 1.6e-70 270.4 264 56.4
CAN.G49.8 Capsicum annuum HOM05D002970 ORTHO05D009571 1.1e-69 267.7 258 54.7
HanXRQChr17g0569221 Helianthus annuus HOM05D002970 ORTHO05D009571 1.1e-69 267.7 251 55.0
MBI11_g24187_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 1.4e-69 267.3 268 55.2
Sabra08G0138400 Salix brachista HOM05D000799 ORTHO05D000629 1.8e-69 266.9 274 54.0
PSO782G2321 Papaver somniferum HOM05D002970 ORTHO05D009571 3.1e-69 266.2 198 65.2
Lsat_1_v5_gn_4_2440 Lactuca sativa HOM05D000799 ORTHO05D009571 2.0e-68 263.5 250 55.2
Psat7g060120 Pisum sativum HOM05D002970 ORTHO05D009571 2.6e-68 263.1 248 58.1
arahy.Tifrunner.gnm1.ann1.4Z4H5J Arachis hypogaea HOM05D002970 ORTHO05D009571 9.9e-68 261.2 196 65.8
arahy.Tifrunner.gnm1.ann1.C1FJC6 Arachis hypogaea HOM05D002970 ORTHO05D009571 1.3e-67 260.8 196 65.3
Aqoxy5G03608 Aquilegia oxysepala HOM05D002970 ORTHO05D009571 1.7e-67 260.4 268 50.0
Zm00001eb406400 Zea mays HOM05D002970 ORTHO05D009571 1.9e-66 256.9 199 60.8
Lj6C818G9 Lonicera japonica HOM05D002970 ORTHO05D009571 3.2e-66 256.1 253 54.9
Cc11_g16280 Coffea canephora HOM05D002970 ORTHO05D009571 5.4e-66 255.4 262 54.2
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 2.7e-65 253.1 302 48.3
EL10Ac6g15186 Beta vulgaris HOM05D002970 ORTHO05D009571 1.7e-64 250.4 262 54.2
PSO063G2167 Papaver somniferum HOM05D002970 ORTHO05D009571 3.0e-64 249.6 225 58.7
Hund25423 Selenicereus undatus HOM05D002970 ORTHO05D009571 8.6e-64 248.1 272 51.1
ATR0824G068 Amborella trichopoda HOM05D002970 ORTHO05D009571 5.6e-63 245.4 273 49.1
Gohir.D05G312700 Gossypium hirsutum HOM05D002970 ORTHO05D009571 4.0e-61 239.2 263 50.2
vmacro16152 Vaccinium macrocarpon HOM05D002970 ORTHO05D009571 5.2e-61 238.8 313 46.6
HPP92_024537 Vanilla planifolia HOM05D002970 ORTHO05D009571 6.8e-61 238.4 210 55.2
Migut.K00672 Erythranthe guttata HOM05D002970 ORTHO05D009571 1.2e-60 237.7 255 51.0
CDE02G1212 Ceratophyllum demersum HOM05D002970 ORTHO05D009571 2.6e-60 236.5 254 51.6
Lj4g0006456 Lotus japonicus HOM05D002970 ORTHO05D009571 3.9e-56 222.6 256 51.6
AUR62024190 Chenopodium quinoa HOM05D002970 ORTHO05D007037 1.9e-55 220.3 212 56.6
ClCG08G017480 Citrullus lanatus HOM05D002970 ORTHO05D009571 4.3e-55 219.2 280 48.2
MD13G1107700 Malus domestica HOM05D002970 ORTHO05D009571 5.6e-55 218.8 255 50.2
TAR371G0312 Trochodendron aralioides HOM05D002970 ORTHO05D007037 5.6e-55 218.8 286 46.2
AUR62005542 Chenopodium quinoa HOM05D002970 ORTHO05D009571 1.6e-54 217.2 260 50.0
Cpa.g.sc86.6 Carica papaya HOM05D002970 ORTHO05D009571 3.6e-54 216.1 404 37.4
Solyc05g014190.4 Solanum lycopersicum HOM05D002970 ORTHO05D009571 1.1e-53 214.5 219 54.3
unitig_749.g13282 Utricularia gibba HOM05D002970 ORTHO05D009571 2.4e-53 213.4 142 68.3
TWI36G0308 Tripterygium wilfordii HOM05D002970 ORTHO05D009571 9.9e-52 208.0 220 54.1
Nn4g22479 Nelumbo nucifera HOM05D002970 ORTHO05D009571 2.7e-49 199.9 217 51.6
Pp3c24_16920 Physcomitrium patens HOM05D002970 ORTHO05D009571 1.0e-48 198.0 250 40.8
Mapoly0082s0035 Marchantia polymorpha HOM05D002970 ORTHO05D009571 8.7e-48 194.9 206 46.1
AagrBONN_evm.TU.Sc2ySwM_344.962 Anthoceros agrestis HOM05D002970 ORTHO05D009571 1.3e-46 191.0 189 49.7
SMO365G0071 Selaginella moellendorffii HOM05D002970 ORTHO05D009571 3.7e-38 162.9 251 39.8
CSS0042994 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 2.5e-31 140.2 95 68.4
Sed0000980 Sechium edule HOM05D002970 ORTHO05D009571 3.3e-31 139.8 160 51.9
Dinv14770 Davidia involucrata HOM05D002970 ORTHO05D009571 2.4e-29 133.7 97 67.0
PRCOL_00001586 Prasinoderma coloniale HOM05D002970 ORTHO05D009571 3.8e-27 126.3 204 33.8
CBR_g20339 Chara braunii HOM05D002970 ORTHO05D009571 1.2e-25 121.3 180 37.8
Glyma.05G172100 Glycine max HOM05D002970 ORTHO05D009571 1.6e-25 120.9 147 47.6
MSTRG.542 Avicennia marina HOM05D002970 ORTHO05D009571 3.3e-23 113.2 160 43.8
Cre12.g556150 Chlamydomonas reinhardtii HOM05D002970 ORTHO05D009571 4.1e-21 106.3 213 32.4
DCAR_007026 Daucus carota HOM05D002970 ORTHO05D007037 5.9e-20 102.4 177 42.4
MCO09G664 Micromonas commoda HOM05D002970 ORTHO05D009571 5.9e-20 102.4 117 41.9
SEGI_41532 Sequoiadendron giganteum HOM05D031330 ORTHO05D009571 1.0e-16 91.7 162 42.0
arahy.Tifrunner.gnm1.ann1.WDY3XU Arachis hypogaea HOM05D002970 ORTHO05D009571 1.5e-15 87.8 128 46.9
Glyma.06G231900 Glycine max HOM05D002970 ORTHO05D009571 7.4e-15 85.5 60 65.0
MBI11_g22623_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 2.2e-14 84.0 90 47.8


User provided reference genes

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