Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g33898 Brassica carinata HOM05D006540 ORTHO05D008202 2.4e-40 168.3 82 100.0
BcaC06g31063 Brassica carinata HOM05D006540 ORTHO05D008202 1.9e-37 158.7 82 92.7
BcaC06g33900 Brassica carinata HOM05D006540 ORTHO05D008202 9.6e-37 156.4 82 91.5
C07p35560 Brassica napus HOM05D006540 ORTHO05D008202 9.6e-37 156.4 82 91.5
BolC7t44080H Brassica oleracea HOM05D006540 ORTHO05D008202 9.6e-37 156.4 82 91.5
AL5G15370 Arabidopsis lyrata HOM05D006540 ORTHO05D008202 3.6e-36 154.5 82 90.2
A06p41910 Brassica napus HOM05D006540 ORTHO05D008202 4.8e-36 154.1 82 90.2
BraA06t27110Z Brassica rapa HOM05D006540 ORTHO05D008202 4.8e-36 154.1 82 90.2
AT3G26580 Arabidopsis thaliana HOM05D006540 ORTHO05D008202 1.8e-35 152.1 82 90.2
Carub.0005s0457 Capsella rubella HOM05D006540 ORTHO05D008202 1.8e-35 152.1 82 87.8
Sp2g15690 Schrenkiella parvula HOM05D006540 ORTHO05D008202 1.8e-35 152.1 82 87.8
CARHR147570 Cardamine hirsuta HOM05D006540 ORTHO05D008202 2.4e-35 151.8 82 87.8
Aa31LG2G5960 Aethionema arabicum HOM05D006540 ORTHO05D008202 5.3e-35 150.6 82 85.4
Thhalv10004491m.g Eutrema salsugineum HOM05D006540 ORTHO05D008202 6.9e-35 150.2 82 86.6
THA.LOC104825662 Tarenaya hassleriana HOM05D006540 ORTHO05D008202 2.3e-30 135.2 82 75.6
Migut.K00595 Erythranthe guttata HOM05D006540 ORTHO05D008202 3.9e-30 134.4 82 75.6
COL.COLO4_24263 Corchorus olitorius HOM05D006540 ORTHO05D008202 1.9e-29 132.1 82 76.8
Ciclev10032003m.g Citrus clementina HOM05D006540 ORTHO05D008202 2.5e-29 131.7 82 73.2
Gohir.D01G150500 Gossypium hirsutum HOM05D006540 ORTHO05D008202 5.6e-29 130.6 82 73.2
Gorai.002G186600 Gossypium raimondii HOM05D006540 ORTHO05D008202 9.6e-29 129.8 82 73.2
Gohir.A01G159600 Gossypium hirsutum HOM05D006540 ORTHO05D008202 2.8e-28 128.3 82 72.0
SalBow2G2200 Salvia bowleyana HOM05D006540 ORTHO05D008202 3.6e-28 127.9 82 70.7
Thecc.02G259400 Theobroma cacao HOM05D006540 ORTHO05D008202 3.6e-28 127.9 82 75.6
Eucgr.B03288 Eucalyptus grandis HOM05D006540 ORTHO05D008202 3.1e-27 124.8 82 69.5
Atru.chr11.2104 Acer truncatum HOM05D006540 ORTHO05D008202 5.3e-27 124.0 82 69.5
Phvul.003G064400 Phaseolus vulgaris HOM05D006540 ORTHO05D008202 9.0e-27 123.2 82 68.3
ClCG05G025710 Citrullus lanatus HOM05D006540 ORTHO05D008202 1.5e-26 122.5 82 68.3
Nn4g22628 Nelumbo nucifera HOM05D006540 ORTHO05D008202 2.6e-26 121.7 82 69.5
Prupe.1G243900 Prunus persica HOM05D006540 ORTHO05D008202 3.4e-26 121.3 82 67.1
Potri.013G090000 Populus trichocarpa HOM05D006540 ORTHO05D008202 4.5e-26 120.9 82 67.1
PGR102G2745 Punica granatum HOM05D006540 ORTHO05D008202 4.5e-26 120.9 82 69.5
TAR622G1382 Trochodendron aralioides HOM05D006540 ORTHO05D008202 4.5e-26 120.9 82 68.3
Glyma.17G134500 Glycine max HOM05D006540 ORTHO05D008202 9.9e-26 119.8 82 64.6
CSS0000303 Camellia sinensis var. sinensis HOM05D006540 ORTHO05D008202 1.3e-25 119.4 82 68.3
Cpa.g.sc33.16 Carica papaya HOM05D006540 ORTHO05D008202 1.3e-25 119.4 82 69.5
Rhsim12G0110600 Rhododendron simsii HOM05D006540 ORTHO05D008202 1.3e-25 119.4 82 67.1
Cc11_g15700 Coffea canephora HOM05D006540 ORTHO05D008202 1.7e-25 119.0 82 64.6
vmacro16198 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 1.7e-25 119.0 82 65.9
GSVIVG01004073001 Vitis vinifera HOM05D006540 ORTHO05D008202 2.2e-25 118.6 80 66.2
Dinv24788 Davidia involucrata HOM05D006540 ORTHO05D008202 2.9e-25 118.2 80 67.5
Cfa009208 Carpinus fangiana HOM05D006540 ORTHO05D008202 4.9e-25 117.5 82 64.6
CiPaw.05G182700 Carya illinoinensis HOM05D006540 ORTHO05D008202 4.9e-25 117.5 82 68.3
arahy.Tifrunner.gnm1.ann1.LD9JWE Arachis hypogaea HOM05D006540 ORTHO05D008202 1.1e-24 116.3 82 64.6
arahy.Tifrunner.gnm1.ann1.NX3C69 Arachis hypogaea HOM05D006540 ORTHO05D008202 1.1e-24 116.3 82 64.6
MSTRG.568 Avicennia marina HOM05D006540 ORTHO05D008202 1.1e-24 116.3 83 65.1
Lalb_Chr05g0228421 Lupinus albus HOM05D006540 ORTHO05D008202 1.1e-24 116.3 82 64.6
RcHm_v2.0_Chr4g0432921 Rosa chinensis HOM05D006540 ORTHO05D008202 1.1e-24 116.3 80 63.8
TWI18G0987 Tripterygium wilfordii HOM05D006540 ORTHO05D008202 1.1e-24 116.3 82 63.4
Duzib268G1404 Durio zibethinus HOM05D006540 ORTHO05D008202 1.4e-24 115.9 82 68.3
Manes.13G024900 Manihot esculenta HOM05D006540 ORTHO05D008202 1.4e-24 115.9 80 66.2
Sabra13G0070200 Salix brachista HOM05D006540 ORTHO05D008202 1.4e-24 115.9 83 65.1
FvH4_4g25530 Fragaria vesca HOM05D006540 ORTHO05D008202 1.9e-24 115.5 80 63.8
FAN12G0822 Fragaria x ananassa HOM05D006540 ORTHO05D008202 1.9e-24 115.5 80 63.8
vmacro01127 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 1.9e-24 115.5 82 63.4
CDE02G2769 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 3.2e-24 114.8 82 62.2
Oeu059907.1 Olea europaea HOM05D006540 ORTHO05D008202 4.2e-24 114.4 80 63.8
CDE09G1037 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 5.4e-24 114.0 82 62.2
FAN17G1845 Fragaria x ananassa HOM05D006540 ORTHO05D008202 5.4e-24 114.0 80 62.5
CAN.G832.5 Capsicum annuum HOM05D006540 ORTHO05D008202 7.1e-24 113.6 82 62.2
FAN22G2305 Fragaria x ananassa HOM05D006540 ORTHO05D008202 7.1e-24 113.6 80 62.5
Peaxi162Scf00128g00138 Petunia axillaris HOM05D006540 ORTHO05D008202 7.1e-24 113.6 82 62.2
AUR62005459 Chenopodium quinoa HOM05D006540 ORTHO05D008202 1.2e-23 112.8 82 59.8
FAN07G1259 Fragaria x ananassa HOM05D006540 ORTHO05D008202 1.2e-23 112.8 80 61.2
HanXRQChr08g0208131 Helianthus annuus HOM05D006540 ORTHO05D008202 1.2e-23 112.8 80 63.8
MD13G1101900 Malus domestica HOM05D006540 ORTHO05D008202 1.2e-23 112.8 82 61.0
PGSC0003DMG400018605 Solanum tuberosum HOM05D006540 ORTHO05D008202 1.2e-23 112.8 82 61.0
Actinidia15092 Actinidia chinensis HOM05D006540 ORTHO05D008202 1.6e-23 112.5 82 63.4
Duzib248G0112 Durio zibethinus HOM05D006540 ORTHO05D008202 2.1e-23 112.1 82 68.3
Lj6A811T79 Lonicera japonica HOM05D006540 ORTHO05D008202 2.1e-23 112.1 80 65.0
ECA233G5619 Erigeron canadensis HOM05D006540 ORTHO05D008202 3.5e-23 111.3 80 63.8
Nitab4.5_0000007g0060 Nicotiana tabacum HOM05D006540 ORTHO05D008202 6.0e-23 110.5 82 61.0
Sc04g0009450 Simmondsia chinensis HOM05D006540 ORTHO05D008202 6.0e-23 110.5 82 61.0
CANSAT35G0572 Cannabis sativa HOM05D006540 ORTHO05D008202 7.9e-23 110.2 82 61.0
MD16G1102400 Malus domestica HOM05D006540 ORTHO05D008202 1.0e-22 109.8 82 58.5
Sopen05g008320 Solanum pennellii HOM05D006540 ORTHO05D008202 1.3e-22 109.4 82 58.5
Nitab4.5_0003628g0010 Nicotiana tabacum HOM05D006540 ORTHO05D008202 2.3e-22 108.6 82 61.0
Actinidia37429 Actinidia chinensis HOM05D006540 ORTHO05D008202 3.0e-22 108.2 82 61.0
Lj4g0023216 Lotus japonicus HOM05D006540 ORTHO05D008202 3.0e-22 108.2 82 62.2
Aqoxy3G01202 Aquilegia oxysepala HOM05D006540 ORTHO05D008202 3.9e-22 107.8 81 65.4
Lsat_1_v5_gn_8_152220 Lactuca sativa HOM05D006540 ORTHO05D008202 5.1e-22 107.5 80 60.0
AUR62024282 Chenopodium quinoa HOM05D006540 ORTHO05D008202 6.7e-22 107.1 82 59.8
EL10Ac6g13801 Beta vulgaris HOM05D006540 ORTHO05D008202 1.1e-21 106.3 82 58.5
Hma1.2p1_0223F.1_g093990 Hydrangea macrophylla HOM05D006540 ORTHO05D008202 5.6e-21 104.0 108 50.0
Ca_22583_v3 Cicer arietinum L. HOM05D006540 ORTHO05D008202 1.3e-20 102.8 82 62.2
ATR0686G190 Amborella trichopoda HOM05D006540 ORTHO05D008202 2.1e-20 102.1 82 57.3
Haze_12245 Corylus avellana HOM05D006540 ORTHO05D008202 2.4e-19 98.6 73 63.0
QL03p058139 Quercus lobata HOM05D006540 ORTHO05D008202 2.4e-19 98.6 69 65.2
DCAR_024432 Daucus carota HOM05D006540 ORTHO05D008202 4.0e-19 97.8 64 67.2
Medtr8g069450 Medicago truncatula HOM05D006540 ORTHO05D008202 2.0e-18 95.5 82 58.5
Psat4g116680 Pisum sativum HOM05D006540 ORTHO05D008202 3.8e-17 91.3 82 57.3
Ah.03g133040 Amaranthus hybridus HOM05D006540 ORTHO05D008202 6.5e-17 90.5 82 52.4
unitig_21.g20872 Utricularia gibba HOM05D006540 ORTHO05D008202 6.5e-17 90.5 71 59.2
HPP92_002022 Vanilla planifolia HOM05D006540 ORTHO05D008202 8.4e-17 90.1 83 55.4
MBI10_g13027_MAGBIO Magnolia biondii HOM05D006540 ORTHO05D008202 1.1e-16 89.7 105 49.5
PSO017G4849 Papaver somniferum HOM05D006540 ORTHO05D008202 1.9e-16 89.0 82 53.7
Rhsim12G0041000 Rhododendron simsii HOM05D006540 ORTHO05D008202 9.3e-16 86.7 66 60.6
Oeu029879.1 Olea europaea HOM05D006540 ORTHO05D008202 6.0e-15 84.0 72 55.6
Os03g0428800 Oryza sativa ssp. japonica HOM05D006540 ORTHO05D008202 2.9e-09 65.1 85 45.9
Zm00001eb096140 Zea mays HOM05D006540 ORTHO05D008202 3.8e-09 64.7 83 44.6
TPR.G17765 Trifolium pratense HOM05D006540 ORTHO05D008202 3.2e-08 61.6 56 57.1
Mapoly0037s0067 Marchantia polymorpha HOM05D006540 ORTHO05D008202 9.3e-08 60.1 80 41.2
AagrBONN_evm.TU.Sc2ySwM_340.367 Anthoceros agrestis HOM05D006540 ORTHO05D008202 2.1e-07 58.9 82 40.2
Pp3c27_6670 Physcomitrium patens HOM05D006540 ORTHO05D008202 2.1e-07 58.9 82 39.0
PSO478G4529 Papaver somniferum HOM05D006540 ORTHO05D008202 3.5e-07 58.2 68 47.1
SEGI_37038 Sequoiadendron giganteum HOM05D006540 ORTHO05D008202 1.8e-06 55.8 80 36.2


User provided reference genes

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