Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g33887 Brassica carinata HOM05D008384 ORTHO05D016044 1.3e-73 279.6 143 100.0
C07p35890 Brassica napus HOM05D008384 ORTHO05D016044 3.9e-70 268.1 137 100.0
BolC7t44105H Brassica oleracea HOM05D008384 ORTHO05D016044 9.7e-69 263.5 143 95.1
BolC7t44107H Brassica oleracea HOM05D008384 ORTHO05D016044 7.2e-64 247.3 135 94.1
C09p22240 Brassica napus HOM05D008384 ORTHO05D016044 5.3e-59 231.1 141 84.4
BolC9t55138H Brassica oleracea HOM05D008384 ORTHO05D016044 2.0e-58 229.2 141 83.7
BcaC04g22193 Brassica carinata HOM05D008384 ORTHO05D016044 6.1e-55 217.6 141 80.1
BraA03t11732Z Brassica rapa HOM05D008384 ORTHO05D016044 5.2e-46 188.0 137 73.0
BcaC09g51574 Brassica carinata HOM05D008384 ORTHO05D016044 5.4e-43 177.9 113 80.5
BcaB03g14887 Brassica carinata HOM05D008384 ORTHO05D009842 4.1e-35 151.8 136 60.3
C05p42740 Brassica napus HOM05D008384 ORTHO05D009842 9.2e-35 150.6 123 68.3
BolC5t33000H Brassica oleracea HOM05D008384 ORTHO05D009842 9.2e-35 150.6 123 68.3
BcaB06g28198 Brassica carinata HOM05D008384 ORTHO05D009842 2.7e-34 149.1 126 64.3
BcaB05g24894 Brassica carinata HOM05D008384 ORTHO05D009842 3.5e-34 148.7 134 59.7
C06p26260 Brassica napus HOM05D008384 ORTHO05D098484 1.3e-33 146.7 82 89.0
BcaB06g28540 Brassica carinata HOM05D008384 ORTHO05D009842 6.6e-33 144.4 138 56.5
C06p27660 Brassica napus HOM05D008384 ORTHO05D009842 7.3e-32 141.0 132 62.1
C09p69740 Brassica napus HOM05D008384 ORTHO05D016044 1.4e-30 136.7 74 93.2
BolC9t59717H Brassica oleracea HOM05D008384 ORTHO05D016044 1.4e-30 136.7 74 93.2
BolC2t07876H Brassica oleracea HOM05D008384 ORTHO05D009842 1.1e-27 127.1 136 55.9
BcaB01g01529 Brassica carinata HOM05D008384 ORTHO05D009842 1.4e-27 126.7 123 56.1
BolC6t37937H Brassica oleracea HOM05D008384 ORTHO05D009842 4.1e-27 125.2 124 59.7
BcaB07g31665 Brassica carinata HOM05D008384 ORTHO05D009842 1.2e-23 113.6 121 54.5
BcaB02g06502 Brassica carinata HOM05D000480 ORTHO05D000313 2.1e-23 112.8 136 49.3
BcaC08g45148 Brassica carinata HOM05D008384 ORTHO05D009842 4.9e-20 101.7 116 51.7
BolC1t01150H Brassica oleracea HOM05D008384 ORTHO05D104577 2.1e-18 96.3 64 75.0
BcaB01g04152 Brassica carinata HOM05D008384 ORTHO05D009842 2.1e-15 86.3 62 71.0
BcaB02g10725 Brassica carinata HOM05D000106 ORTHO05D000160 1.1e-11 73.9 112 42.9
C03p32500 Brassica napus HOM05D008384 ORTHO05D009842 1.1e-11 73.9 57 66.7
BcaB01g06169 Brassica carinata HOM05D008384 ORTHO05D039137 6.0e-10 68.2 113 42.5
BolC6t36973H Brassica oleracea HOM05D001168 ORTHO05D027424 1.9e-08 63.2 66 56.1
BcaC08g44342 Brassica carinata HOM05D001168 ORTHO05D027424 2.5e-08 62.8 66 56.1
C06p17790 Brassica napus HOM05D001168 ORTHO05D027424 2.5e-08 62.8 66 56.1
C05p34680 Brassica napus HOM05D052545 ORTHO05D040058 3.3e-08 62.4 91 46.2
BcaC05g27502 Brassica carinata HOM05D052545 ORTHO05D040058 4.3e-08 62.0 91 46.2
C03p01000 Brassica napus HOM05D008384 ORTHO05D039137 2.8e-07 59.3 80 46.2
BcaB08g35559 Brassica carinata HOM05D008384 ORTHO05D094156 1.4e-06 57.0 76 50.0


User provided reference genes

Program Settings