Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g33807 Brassica carinata HOM05D000125 ORTHO05D032095 1.7e-77 292.4 128 100.0
BolC7t44181H Brassica oleracea HOM05D000125 ORTHO05D000120 6.9e-66 253.8 111 100.0
BcaC06g30981 Brassica carinata HOM05D000125 ORTHO05D032095 5.3e-50 201.1 111 81.1
Thhalv10003761m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 1.5e-33 146.4 111 62.2
Thhalv10003760m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 2.6e-33 145.6 111 63.1
Thhalv10003743m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 1.7e-32 142.9 111 61.3
BcaC06g30986 Brassica carinata HOM05D000125 ORTHO05D032095 7.2e-31 137.5 109 57.8
AL8G18170 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 1.2e-30 136.7 107 57.0
AT3G27480 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 2.7e-30 135.6 112 51.8
AT5G42840 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 4.7e-30 134.8 107 57.0
AT3G27500 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 1.4e-29 133.3 109 52.3
AT3G28650 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 3.0e-29 132.1 112 54.5
Carub.0005s0592 Capsella rubella HOM05D000125 ORTHO05D000120 3.0e-29 132.1 133 45.9
Thhalv10003740m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 5.1e-29 131.3 109 56.0
AL5G18290 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 6.7e-29 131.0 112 51.8
CARHR148880 Cardamine hirsuta HOM05D000125 ORTHO05D000120 6.7e-29 131.0 110 56.4
AL5G16900 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 1.1e-28 130.2 112 51.8
Thhalv10003754m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 1.1e-28 130.2 111 56.8
Carub.0005s0590 Capsella rubella HOM05D000125 ORTHO05D000120 1.5e-28 129.8 112 52.7
CARHR148860 Cardamine hirsuta HOM05D000125 ORTHO05D000120 4.4e-28 128.3 109 52.3
AT3G45530 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 4.8e-27 124.8 113 49.6
Carub.0005s0589 Capsella rubella HOM05D000125 ORTHO05D000120 4.8e-27 124.8 112 49.1
AT3G27490 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 3.8e-24 115.2 112 47.3
Thhalv10005411m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 5.0e-24 114.8 105 53.3
Thhalv10005293m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 8.5e-24 114.0 109 52.3
AL6G42120 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 6.3e-19 97.8 112 43.8
BolC7t44172H Brassica oleracea HOM05D000125 ORTHO05D000120 7.0e-18 94.4 105 41.9
Thhalv10005296m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 2.2e-16 89.4 109 39.4
Carub.0005s0591 Capsella rubella HOM05D000125 ORTHO05D000120 8.0e-14 80.9 119 37.8
AT3G27473 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 1.5e-12 76.6 44 68.2
AL7G49650 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 3.4e-12 75.5 106 38.7
C04p15280 Brassica napus HOM05D000125 ORTHO05D000120 1.3e-11 73.6 111 36.9
BolC4t23100H Brassica oleracea HOM05D000125 ORTHO05D000120 1.3e-11 73.6 111 36.9
Carub.0007s3532 Capsella rubella HOM05D000125 ORTHO05D000120 6.3e-11 71.2 109 37.6
BcaC02g11458 Brassica carinata HOM05D000125 ORTHO05D000120 1.1e-10 70.5 111 36.9
C04p15320 Brassica napus HOM05D000125 ORTHO05D000120 1.1e-10 70.5 111 36.9
CARHR261780 Cardamine hirsuta HOM05D000125 ORTHO05D000120 1.1e-10 70.5 106 35.8
AT5G40320 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 1.4e-10 70.1 106 35.8
Aa31LG4G15740 Aethionema arabicum HOM05D000125 ORTHO05D000120 1.8e-10 69.7 114 34.2
Aa31sc652G60 Aethionema arabicum HOM05D000125 ORTHO05D000120 2.4e-10 69.3 111 33.3
Aa31sc652G70 Aethionema arabicum HOM05D000125 ORTHO05D000120 2.4e-10 69.3 111 33.3
BolC4t23103H Brassica oleracea HOM05D000125 ORTHO05D000120 2.4e-10 69.3 111 36.0
CARHR002860 Cardamine hirsuta HOM05D000125 ORTHO05D000120 3.1e-10 68.9 109 32.1
BolC4t23105H Brassica oleracea HOM05D000125 ORTHO05D000120 4.1e-10 68.6 105 37.1
BcaB02g10594 Brassica carinata HOM05D000125 ORTHO05D000120 5.4e-10 68.2 105 37.1
Aa31LG4G15750 Aethionema arabicum HOM05D000125 ORTHO05D000120 1.2e-09 67.0 115 31.3
Thhalv10012912m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 2.0e-09 66.2 90 34.4
Thhalv10012095m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 3.5e-09 65.5 69 42.0
Thhalv10016311m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 5.9e-09 64.7 70 38.6
THA.LOC104805437 Tarenaya hassleriana HOM05D000125 ORTHO05D000120 7.7e-09 64.3 116 35.3
AL8G12890 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 1.0e-08 63.9 90 36.7
BraA09t35842Z Brassica rapa HOM05D000125 ORTHO05D000120 1.0e-08 63.9 75 38.7
C04p47000 Brassica napus HOM05D000125 ORTHO05D000120 1.7e-08 63.2 109 36.7
BolC4t26294H Brassica oleracea HOM05D000125 ORTHO05D000120 1.7e-08 63.2 109 36.7
C09p01990 Brassica napus HOM05D000125 ORTHO05D000120 2.2e-08 62.8 74 37.8
A04p13220 Brassica napus HOM05D000125 ORTHO05D000120 2.9e-08 62.4 109 36.7
BraA04t16981Z Brassica rapa HOM05D000125 ORTHO05D000120 2.9e-08 62.4 109 36.7
CARHR110830 Cardamine hirsuta HOM05D000125 ORTHO05D000120 2.9e-08 62.4 78 37.2
Thhalv10029207m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 2.9e-08 62.4 78 34.6
BolC9t53131H Brassica oleracea HOM05D000125 ORTHO05D000120 3.8e-08 62.0 79 38.0
AT4G11550 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 6.5e-08 61.2 105 36.2
A09p01650 Brassica napus HOM05D000125 ORTHO05D000120 6.5e-08 61.2 124 33.1
Carub.0008s0226 Capsella rubella HOM05D000125 ORTHO05D000120 6.5e-08 61.2 90 33.3
AT1G58037 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 8.5e-08 60.8 101 32.7
BcaC04g24046 Brassica carinata HOM05D000125 ORTHO05D000120 8.5e-08 60.8 72 37.5
Carub.0006s3544 Capsella rubella HOM05D000125 ORTHO05D000120 8.5e-08 60.8 94 33.0
Carub.0007s2842 Capsella rubella HOM05D000125 ORTHO05D000120 8.5e-08 60.8 105 31.4
THA.LOC104805963 Tarenaya hassleriana HOM05D000125 ORTHO05D000120 8.5e-08 60.8 74 37.8
C07p37170 Brassica napus HOM05D000125 ORTHO05D000120 1.9e-07 59.7 86 33.7
BolC7t44227H Brassica oleracea HOM05D000125 ORTHO05D000120 1.9e-07 59.7 86 33.7
C09p01750 Brassica napus HOM05D000125 ORTHO05D000120 2.5e-07 59.3 72 37.5
AL8G36490 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 4.2e-07 58.5 111 30.6
CARHR110710 Cardamine hirsuta HOM05D000125 ORTHO05D000120 4.2e-07 58.5 70 40.0
CARHR250400 Cardamine hirsuta HOM05D000125 ORTHO05D000120 4.2e-07 58.5 96 31.2
BcaNung00492 Brassica carinata HOM05D000125 ORTHO05D000120 5.5e-07 58.2 109 33.0
CARHR273550 Cardamine hirsuta HOM05D000125 ORTHO05D000120 5.5e-07 58.2 113 30.1
Carub.0005s1456 Capsella rubella HOM05D000125 ORTHO05D000120 9.4e-07 57.4 92 33.7
CARHR250050 Cardamine hirsuta HOM05D000125 ORTHO05D000120 9.4e-07 57.4 98 30.6
Aa31sc23G370 Aethionema arabicum HOM05D000125 ORTHO05D000120 1.2e-06 57.0 102 31.4
AT4G11540 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 1.6e-06 56.6 74 37.8
Carub.0006s2010 Capsella rubella HOM05D000125 ORTHO05D000120 1.6e-06 56.6 111 30.6
Carub.0008s2051 Capsella rubella HOM05D000125 ORTHO05D000120 2.1e-06 56.2 111 31.5
C09p02000 Brassica napus HOM05D000125 ORTHO05D000120 2.7e-06 55.8 113 31.9
CARHR191180 Cardamine hirsuta HOM05D000125 ORTHO05D000120 2.7e-06 55.8 95 30.5
Thhalv10023179m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 2.7e-06 55.8 71 35.2
Aa31LG4G15770 Aethionema arabicum HOM05D000125 ORTHO05D000120 3.6e-06 55.5 70 34.3
AT5G22355 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 3.6e-06 55.5 111 28.8
Carub.0006s3031 Capsella rubella HOM05D000125 ORTHO05D000120 3.6e-06 55.5 87 34.5
Carub.0006s3058 Capsella rubella HOM05D000125 ORTHO05D000120 3.6e-06 55.5 68 41.2
AT4G01760 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 4.7e-06 55.1 75 34.7
Gohir.D02G043900 Gossypium hirsutum HOM05D000125 ORTHO05D000120 4.7e-06 55.1 122 29.5
AT4G01930 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 6.1e-06 54.7 89 34.8
Carub.0001s3932 Capsella rubella HOM05D000125 ORTHO05D000120 6.1e-06 54.7 93 31.2
CARHR248840 Cardamine hirsuta HOM05D000125 ORTHO05D000120 6.1e-06 54.7 91 33.0
Thhalv10009528m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 6.1e-06 54.7 90 33.3
BcaB04g21361 Brassica carinata HOM05D000125 ORTHO05D000120 8.0e-06 54.3 95 30.5
Sp7g16340 Schrenkiella parvula HOM05D000125 ORTHO05D000120 8.0e-06 54.3 105 30.5


User provided reference genes

Program Settings