Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g33758 Brassica carinata HOM05D000028 ORTHO05D021109 9.5e-29 129.4 62 100.0
C07p37300 Brassica napus HOM05D000028 ORTHO05D021109 8.0e-28 126.3 60 100.0
BcaB04g19454 Brassica carinata HOM05D000028 ORTHO05D000390 3.9e-14 80.9 64 68.8
Sp2g17050 Schrenkiella parvula HOM05D000028 ORTHO05D000390 5.0e-14 80.5 63 69.8
A02p35740 Brassica napus HOM05D000028 ORTHO05D000390 1.9e-13 78.6 63 66.7
BraA02t08576Z Brassica rapa HOM05D000028 ORTHO05D000390 1.9e-13 78.6 63 66.7
AT3G28050 Arabidopsis thaliana HOM05D000028 ORTHO05D000390 3.3e-13 77.8 63 66.7
BcaB07g30135 Brassica carinata HOM05D000028 ORTHO05D000390 4.3e-13 77.4 63 66.7
Thhalv10004446m.g Eutrema salsugineum HOM05D000028 ORTHO05D000390 7.3e-13 76.6 63 65.1
BcaC04g23884 Brassica carinata HOM05D000028 ORTHO05D000390 1.2e-12 75.9 64 64.1
C02p54620 Brassica napus HOM05D000028 ORTHO05D000390 1.2e-12 75.9 63 65.1
C09p03810 Brassica napus HOM05D000028 ORTHO05D000390 1.2e-12 75.9 64 64.1
BolC2t11525H Brassica oleracea HOM05D000028 ORTHO05D000390 1.2e-12 75.9 63 65.1
BolC9t53305H Brassica oleracea HOM05D000028 ORTHO05D000390 1.2e-12 75.9 64 64.1
BraA09t35995Z Brassica rapa HOM05D000028 ORTHO05D000390 1.2e-12 75.9 64 64.1
A09p03570 Brassica napus HOM05D000028 ORTHO05D000390 1.6e-12 75.5 64 64.1
AL5G17580 Arabidopsis lyrata HOM05D000028 ORTHO05D000390 2.1e-12 75.1 63 66.7
Carub.0005s0660 Capsella rubella HOM05D000028 ORTHO05D021109 2.1e-12 75.1 61 65.6
CARHR149680 Cardamine hirsuta HOM05D000028 ORTHO05D000390 2.8e-12 74.7 63 63.5
Carub.0005s0657 Capsella rubella HOM05D000028 ORTHO05D000390 3.1e-11 71.2 63 61.9
Aa31LG2G4760 Aethionema arabicum HOM05D000028 ORTHO05D000390 5.8e-10 67.0 61 59.0
A06p40680 Brassica napus HOM05D000028 ORTHO05D000390 9.2e-08 59.7 34 85.3
BraA06t26989Z Brassica rapa HOM05D000028 ORTHO05D000390 9.2e-08 59.7 34 85.3
BcaC03g17501 Brassica carinata HOM05D000028 ORTHO05D000390 2.7e-07 58.2 55 58.2


User provided reference genes

Program Settings