Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g33696 Brassica carinata HOM05D000353 ORTHO05D012074 1.2e-59 233.0 118 100.0
BcaC03g15824 Brassica carinata HOM05D000353 ORTHO05D000174 4.1e-57 224.6 118 96.6
BolC5t34001H Brassica oleracea HOM05D000353 ORTHO05D012074 1.6e-56 222.6 116 96.6
BcaC04g22103 Brassica carinata HOM05D000353 ORTHO05D012074 3.5e-56 221.5 118 94.9
BcaC03g15183 Brassica carinata HOM05D000353 ORTHO05D000174 1.0e-55 219.9 118 94.1
BcaC06g36012 Brassica carinata HOM05D000353 ORTHO05D012074 1.0e-55 219.9 118 94.9
BolC2t09049H Brassica oleracea HOM05D000353 ORTHO05D012074 1.0e-55 219.9 116 94.8
BolC5t34015H Brassica oleracea HOM05D000353 ORTHO05D012074 1.0e-55 219.9 116 95.7
BraA02t07901Z Brassica rapa HOM05D000353 ORTHO05D012074 1.0e-55 219.9 116 95.7
BolC4t26685H Brassica oleracea HOM05D000353 ORTHO05D012074 3.9e-55 218.0 116 94.0
BolC5t32307H Brassica oleracea HOM05D000353 ORTHO05D012074 3.9e-55 218.0 116 94.0
A02p28660 Brassica napus HOM05D000353 ORTHO05D012074 5.0e-55 217.6 115 95.7
C02p27630 Brassica napus HOM05D000353 ORTHO05D012074 6.6e-55 217.2 116 94.0
BolC9t55251H Brassica oleracea HOM05D000353 ORTHO05D012074 6.6e-55 217.2 116 94.0
C09p23330 Brassica napus HOM05D000353 ORTHO05D012074 3.3e-54 214.9 115 93.9
C07p19100 Brassica napus HOM05D000353 ORTHO05D012074 1.2e-53 213.0 118 90.7
BolC8t48492H Brassica oleracea HOM05D000353 ORTHO05D012074 1.2e-53 213.0 111 97.3
BcaC06g35171 Brassica carinata HOM05D000353 ORTHO05D012074 1.6e-53 212.6 118 90.7
BolC7t42421H Brassica oleracea HOM05D000353 ORTHO05D012074 1.6e-53 212.6 118 90.7
A05p21300 Brassica napus HOM05D000353 ORTHO05D012074 6.2e-53 210.7 118 90.7
BraA05t21038Z Brassica rapa HOM05D000353 ORTHO05D012074 6.2e-53 210.7 118 90.7
C02p47700 Brassica napus HOM05D000353 ORTHO05D012074 1.8e-52 209.1 118 89.0
BcaC05g27602 Brassica carinata HOM05D000353 ORTHO05D012074 2.6e-51 205.3 108 96.3
C05p35880 Brassica napus HOM05D000353 ORTHO05D005681 2.6e-51 205.3 108 96.3
BolC9t57768H Brassica oleracea HOM05D000353 ORTHO05D012074 3.7e-50 201.4 118 89.8
A01p27040 Brassica napus HOM05D000353 ORTHO05D012074 3.2e-49 198.4 118 86.4
BraA01t02838Z Brassica rapa HOM05D000353 ORTHO05D012074 3.2e-49 198.4 118 86.4
C03p63080 Brassica napus HOM05D000353 ORTHO05D005681 3.5e-48 194.9 106 95.3
C02p27150 Brassica napus HOM05D000353 ORTHO05D012074 2.5e-46 188.7 118 84.7
C05p53350 Brassica napus HOM05D000353 ORTHO05D005681 2.8e-45 185.3 99 96.0
C09p49190 Brassica napus HOM05D000353 ORTHO05D005681 2.8e-37 158.7 85 96.5
BcaC05g29110 Brassica carinata HOM05D000353 ORTHO05D039625 8.4e-34 147.1 80 96.2
BcaC09g50234 Brassica carinata HOM05D000353 ORTHO05D005681 1.1e-33 146.7 83 90.4
C09p64180 Brassica napus HOM05D000353 ORTHO05D039625 1.4e-33 146.4 78 94.9
BcaB01g00780 Brassica carinata HOM05D000353 ORTHO05D011975 2.3e-31 139.0 119 62.2
BcaB07g32709 Brassica carinata HOM05D000353 ORTHO05D005681 1.5e-30 136.3 85 78.8
A01p27050 Brassica napus HOM05D000353 ORTHO05D011975 6.9e-28 127.5 118 54.2
BraA01t02839Z Brassica rapa HOM05D000353 ORTHO05D011975 6.9e-28 127.5 118 54.2
C09p23340 Brassica napus HOM05D000353 ORTHO05D011975 8.9e-28 127.1 118 55.1
C02p47690 Brassica napus HOM05D000353 ORTHO05D011975 1.5e-27 126.3 118 53.4
BolC2t10806H Brassica oleracea HOM05D000353 ORTHO05D011975 1.5e-27 126.3 118 53.4
BolC5t31839H Brassica oleracea HOM05D000353 ORTHO05D011975 2.0e-27 125.9 118 53.4
C05p35890 Brassica napus HOM05D000353 ORTHO05D011975 2.6e-27 125.6 118 54.2
A02p28650 Brassica napus HOM05D000353 ORTHO05D011975 3.4e-27 125.2 118 54.2
BraA02t07900Z Brassica rapa HOM05D000353 ORTHO05D011975 3.4e-27 125.2 118 54.2
C05p53380 Brassica napus HOM05D000353 ORTHO05D011975 5.8e-27 124.4 118 54.2
BolC9t57769H Brassica oleracea HOM05D000353 ORTHO05D011975 5.8e-27 124.4 118 54.2
BolC5t34008H Brassica oleracea HOM05D000353 ORTHO05D011975 7.6e-27 124.0 118 53.4
BolC5t34016H Brassica oleracea HOM05D000353 ORTHO05D011975 1.3e-26 123.2 118 53.4
BolC8t48493H Brassica oleracea HOM05D000353 ORTHO05D011975 3.8e-26 121.7 118 54.2
BolC8t47318H Brassica oleracea HOM05D000353 ORTHO05D011975 1.4e-25 119.8 118 51.7
C09p64190 Brassica napus HOM05D000353 ORTHO05D011975 4.2e-25 118.2 113 52.2
BolC9t59256H Brassica oleracea HOM05D000353 ORTHO05D011975 4.2e-25 118.2 113 52.2
C02p27140 Brassica napus HOM05D000353 ORTHO05D000174 7.3e-22 107.5 107 52.3
BcaB02g10509 Brassica carinata HOM05D000353 ORTHO05D005681 8.1e-21 104.0 118 45.8
BolC8t47825H Brassica oleracea HOM05D000353 ORTHO05D039805 3.1e-20 102.1 115 47.8
BcaC07g37502 Brassica carinata HOM05D000353 ORTHO05D039805 1.5e-19 99.8 115 47.8
BcaB01g02874 Brassica carinata HOM05D000353 ORTHO05D011975 2.6e-19 99.0 85 62.4
BcaB02g11477 Brassica carinata HOM05D000353 ORTHO05D005681 5.8e-19 97.8 118 40.7
BcaB03g15977 Brassica carinata HOM05D000353 ORTHO05D005681 7.6e-19 97.4 118 42.4
C02p27620 Brassica napus HOM05D000353 ORTHO05D005681 9.9e-19 97.1 99 51.5
BcaB03g16214 Brassica carinata HOM05D000353 ORTHO05D005681 3.8e-18 95.1 118 44.9
BcaB08g34856 Brassica carinata HOM05D000353 ORTHO05D005681 6.4e-18 94.4 118 41.5
BcaB08g34640 Brassica carinata HOM05D000353 ORTHO05D005681 1.1e-17 93.6 118 39.8
BcaB04g17266 Brassica carinata HOM05D000353 ORTHO05D005681 1.4e-17 93.2 118 39.8
BcaB04g18044 Brassica carinata HOM05D000353 ORTHO05D005681 1.4e-17 93.2 118 39.8
C09p21140 Brassica napus HOM05D000353 ORTHO05D013242 2.4e-17 92.4 116 44.0
BcaB01g01095 Brassica carinata HOM05D000353 ORTHO05D005681 5.4e-17 91.3 118 39.8
BolC9t55015H Brassica oleracea HOM05D000353 ORTHO05D013242 5.4e-17 91.3 116 44.0
BcaB05g24102 Brassica carinata HOM05D000353 ORTHO05D005681 1.6e-16 89.7 117 42.7
C03p63090 Brassica napus HOM05D000353 ORTHO05D011975 4.6e-16 88.2 95 50.5
C02p55690 Brassica napus HOM05D000353 ORTHO05D005681 7.9e-16 87.4 108 42.6
C09p17520 Brassica napus HOM05D000353 ORTHO05D099299 1.3e-15 86.7 46 97.8
BcaB06g27200 Brassica carinata HOM05D000353 ORTHO05D005681 3.9e-15 85.1 118 39.0
BolC5t32308H Brassica oleracea HOM05D000353 ORTHO05D011975 5.1e-15 84.7 108 46.3
C09p17510 Brassica napus HOM05D000353 ORTHO05D011975 1.1e-14 83.6 95 48.4
BolC5t32503H Brassica oleracea HOM05D000353 ORTHO05D042563 3.3e-14 82.0 87 50.6
BcaB03g16438 Brassica carinata HOM05D000353 ORTHO05D013242 5.6e-14 81.3 94 44.7
BolC7t42422H Brassica oleracea HOM05D000353 ORTHO05D011975 7.4e-14 80.9 74 54.1
C05p37620 Brassica napus HOM05D000353 ORTHO05D042563 9.6e-14 80.5 87 49.4
BcaB03g16076 Brassica carinata HOM05D000353 ORTHO05D005681 2.1e-13 79.3 106 39.6
BcaB05g22042 Brassica carinata HOM05D000353 ORTHO05D000199 3.7e-13 78.6 72 59.7
BraA02t07832Z Brassica rapa HOM05D000353 ORTHO05D027349 4.8e-13 78.2 115 35.7
BcaB01g02451 Brassica carinata HOM05D003591 ORTHO05D021638 1.1e-12 77.0 115 38.3
BcaC01g04869 Brassica carinata HOM05D000353 ORTHO05D027041 1.1e-12 77.0 117 36.8
BcaB01g01538 Brassica carinata HOM05D011453 ORTHO05D014511 1.8e-12 76.3 95 44.2
C03p32830 Brassica napus HOM05D000353 ORTHO05D027041 3.1e-12 75.5 117 35.9
BolC3t15617H Brassica oleracea HOM05D000353 ORTHO05D027041 3.1e-12 75.5 117 35.9
BcaC05g27208 Brassica carinata HOM05D000353 ORTHO05D011975 2.0e-11 72.8 69 52.2
BcaB08g35178 Brassica carinata HOM05D000353 ORTHO05D032815 3.4e-11 72.0 80 48.8
A05p21310 Brassica napus HOM05D000353 ORTHO05D042653 3.8e-10 68.6 118 35.6
BolC8t48064H Brassica oleracea HOM05D000353 ORTHO05D033592 4.9e-10 68.2 105 35.2
BcaC08g43066 Brassica carinata HOM05D000353 ORTHO05D027041 1.1e-09 67.0 112 39.3
BolC5t32374H Brassica oleracea HOM05D000353 ORTHO05D000174 1.9e-09 66.2 66 48.5
BcaB01g01136 Brassica carinata HOM05D000353 ORTHO05D013242 2.4e-09 65.9 86 40.7
BcaB01g01176 Brassica carinata HOM05D000353 ORTHO05D092964 3.2e-09 65.5 75 40.0
C07p19110 Brassica napus HOM05D000353 ORTHO05D011975 7.1e-09 64.3 62 50.0
C05p37600 Brassica napus HOM05D000353 ORTHO05D040703 1.2e-08 63.5 60 53.3
BcaB08g35405 Brassica carinata HOM05D000353 ORTHO05D023971 3.5e-08 62.0 102 33.3
BcaB05g21746 Brassica carinata HOM05D007309 ORTHO05D010099 6.0e-08 61.2 115 34.8
C09p33370 Brassica napus HOM05D003591 ORTHO05D005681 1.3e-07 60.1 112 35.7
BcaB07g33228 Brassica carinata HOM05D000353 ORTHO05D023971 1.8e-07 59.7 92 37.0
BcaC06g34843 Brassica carinata HOM05D003591 ORTHO05D005681 3.0e-07 58.9 112 34.8
BolC7t42807H Brassica oleracea HOM05D003591 ORTHO05D005681 3.0e-07 58.9 112 34.8
BcaB02g11108 Brassica carinata HOM05D000353 ORTHO05D005681 3.9e-07 58.5 89 37.1
BolC5t32499H Brassica oleracea HOM05D000353 ORTHO05D040703 3.9e-07 58.5 55 52.7
C02p34170 Brassica napus HOM05D003591 ORTHO05D005681 6.7e-07 57.8 112 33.0
BolC1t02629H Brassica oleracea HOM05D003591 ORTHO05D005681 6.7e-07 57.8 112 33.0
BolC9t56172H Brassica oleracea HOM05D003591 ORTHO05D005681 6.7e-07 57.8 107 36.4
C01p40950 Brassica napus HOM05D003591 ORTHO05D005681 8.7e-07 57.4 112 33.9
BcaB06g26120 Brassica carinata HOM05D000353 ORTHO05D013242 1.1e-06 57.0 64 45.3
C04p36250 Brassica napus HOM05D003591 ORTHO05D005681 1.1e-06 57.0 112 33.0
BolC2t08413H Brassica oleracea HOM05D003591 ORTHO05D005681 1.1e-06 57.0 112 33.9
BolC4t25162H Brassica oleracea HOM05D003591 ORTHO05D005681 1.1e-06 57.0 112 33.0
C04p20950 Brassica napus HOM05D003591 ORTHO05D005681 1.5e-06 56.6 112 33.0
BolC7t41596H Brassica oleracea HOM05D003591 ORTHO05D005681 1.5e-06 56.6 112 33.9
BolC2t09403H Brassica oleracea HOM05D003591 ORTHO05D005681 1.9e-06 56.2 112 32.1
BolC4t23171H Brassica oleracea HOM05D003591 ORTHO05D005681 1.9e-06 56.2 112 33.9
BolC9t55252H Brassica oleracea HOM05D000353 ORTHO05D042653 1.9e-06 56.2 38 63.2
C02p32250 Brassica napus HOM05D003591 ORTHO05D005681 2.5e-06 55.8 112 33.0
C05p33180 Brassica napus HOM05D003591 ORTHO05D005681 2.5e-06 55.8 112 33.0
C05p35170 Brassica napus HOM05D003591 ORTHO05D005681 2.5e-06 55.8 112 33.0
C06p29690 Brassica napus HOM05D003591 ORTHO05D005681 2.5e-06 55.8 112 33.0
C07p31990 Brassica napus HOM05D003591 ORTHO05D005681 2.5e-06 55.8 112 33.0
C09p28690 Brassica napus HOM05D003591 ORTHO05D005681 2.5e-06 55.8 112 33.0
BolC2t09405H Brassica oleracea HOM05D003591 ORTHO05D005681 2.5e-06 55.8 113 35.4
BolC4t25466H Brassica oleracea HOM05D003591 ORTHO05D005681 2.5e-06 55.8 112 33.0
BcaB04g17828 Brassica carinata HOM05D003591 ORTHO05D005681 3.3e-06 55.5 112 31.2
BolC5t32448H Brassica oleracea HOM05D003591 ORTHO05D005681 3.3e-06 55.5 112 33.0
A08p10030 Brassica napus HOM05D000353 ORTHO05D033592 4.3e-06 55.1 76 36.8
C06p00360 Brassica napus HOM05D000353 ORTHO05D032815 4.3e-06 55.1 56 46.4
BcaB04g17355 Brassica carinata HOM05D000353 ORTHO05D005681 5.6e-06 54.7 117 32.5
BolC3t20044H Brassica oleracea HOM05D003591 ORTHO05D005681 5.6e-06 54.7 112 33.0
BolC6t37339H Brassica oleracea HOM05D003591 ORTHO05D005681 5.6e-06 54.7 112 33.0
BolC9t57338H Brassica oleracea HOM05D003591 ORTHO05D005681 5.6e-06 54.7 112 32.1
BcaB06g27013 Brassica carinata HOM05D003591 ORTHO05D005681 7.4e-06 54.3 112 31.2
BcaNung05687 Brassica carinata HOM05D000353 ORTHO05D013242 7.4e-06 54.3 73 42.5
C01p09530 Brassica napus HOM05D003591 ORTHO05D005681 7.4e-06 54.3 112 32.1
C02p28120 Brassica napus HOM05D003591 ORTHO05D005681 7.4e-06 54.3 112 33.0
C05p37070 Brassica napus HOM05D003591 ORTHO05D005681 7.4e-06 54.3 112 32.1
C08p14230 Brassica napus HOM05D003591 ORTHO05D005681 7.4e-06 54.3 112 32.1
C09p13180 Brassica napus HOM05D003591 ORTHO05D005681 7.4e-06 54.3 112 32.1
BolC2t08856H Brassica oleracea HOM05D003591 ORTHO05D005681 7.4e-06 54.3 112 33.0
BolC9t54212H Brassica oleracea HOM05D003591 ORTHO05D005681 7.4e-06 54.3 112 32.1
BolC9t59255H Brassica oleracea HOM05D000353 ORTHO05D105477 7.4e-06 54.3 30 83.3
BcaB04g17916 Brassica carinata HOM05D000353 ORTHO05D023971 9.6e-06 53.9 92 32.6
C02p22600 Brassica napus HOM05D003591 ORTHO05D005681 9.6e-06 53.9 112 33.0
C04p15980 Brassica napus HOM05D003591 ORTHO05D005681 9.6e-06 53.9 112 33.0
C04p36620 Brassica napus HOM05D003591 ORTHO05D005681 9.6e-06 53.9 112 32.1
BolC3t15622H Brassica oleracea HOM05D003591 ORTHO05D005681 9.6e-06 53.9 112 31.2
BolC4t25135H Brassica oleracea HOM05D003591 ORTHO05D005681 9.6e-06 53.9 112 32.1


User provided reference genes

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