Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g33589 Brassica carinata HOM05D002776 ORTHO05D003542 6.5e-229 797.0 379 100.0
C01p48980 Brassica napus HOM05D002776 ORTHO05D003542 5.5e-79 298.9 549 41.0
C07p49090 Brassica napus HOM05D002776 ORTHO05D003044 3.5e-49 199.9 472 35.8
C02p53520 Brassica napus HOM05D002776 ORTHO05D003044 3.3e-47 193.4 468 35.0
C03p65980 Brassica napus HOM05D002776 ORTHO05D003044 7.3e-47 192.2 472 35.0
A07p02050 Brassica napus HOM05D002776 ORTHO05D003044 4.7e-46 189.5 442 36.2
C09p19460 Brassica napus HOM05D002776 ORTHO05D003044 6.2e-46 189.1 472 34.5
C01p30580 Brassica napus HOM05D002776 ORTHO05D003044 5.2e-45 186.0 444 35.4
C03p66380 Brassica napus HOM05D002776 ORTHO05D003044 7.5e-44 182.2 469 33.0
BolC6t36241H Brassica oleracea HOM05D002776 ORTHO05D003044 2.9e-43 180.3 269 43.9
A01p26310 Brassica napus HOM05D002776 ORTHO05D011320 3.7e-43 179.9 332 41.3
A05p28380 Brassica napus HOM05D002776 ORTHO05D003044 2.7e-41 173.7 466 33.7
A03p65940 Brassica napus HOM05D002776 ORTHO05D003044 4.7e-38 162.9 510 31.2
A08p09940 Brassica napus HOM05D002776 ORTHO05D003044 1.8e-37 161.0 408 34.6
A03p54420 Brassica napus HOM05D002776 ORTHO05D003044 2.3e-37 160.6 460 32.0
C01p44940 Brassica napus HOM05D002776 ORTHO05D003044 4.0e-37 159.8 400 34.2
BraA03t15647Z Brassica rapa HOM05D002776 ORTHO05D003044 6.8e-37 159.1 427 34.2
BcaC09g48965 Brassica carinata HOM05D002776 ORTHO05D003044 1.2e-36 158.3 502 30.7
A10p06580 Brassica napus HOM05D002776 ORTHO05D000395 1.2e-36 158.3 482 30.5
C09p27490 Brassica napus HOM05D002776 ORTHO05D003044 1.2e-36 158.3 443 30.7
BcaC08g44371 Brassica carinata HOM05D002776 ORTHO05D003044 1.5e-36 157.9 496 31.5
BolC6t36736H Brassica oleracea HOM05D002776 ORTHO05D011320 3.4e-36 156.8 112 69.6
A10p06820 Brassica napus HOM05D002776 ORTHO05D003044 9.9e-36 155.2 505 30.5
C06p18050 Brassica napus HOM05D002776 ORTHO05D000395 9.9e-36 155.2 105 74.3
BolC8t49070H Brassica oleracea HOM05D002776 ORTHO05D011320 9.9e-36 155.2 106 72.6
BcaC06g36448 Brassica carinata HOM05D002776 ORTHO05D003044 1.7e-35 154.5 509 30.3
BolC3t18911H Brassica oleracea HOM05D002776 ORTHO05D003044 2.2e-35 154.1 106 72.6
BcaC06g36687 Brassica carinata HOM05D002776 ORTHO05D011320 2.9e-35 153.7 105 73.3
C03p80440 Brassica napus HOM05D002776 ORTHO05D011320 4.9e-35 152.9 112 67.9
C03p75860 Brassica napus HOM05D002776 ORTHO05D003044 1.9e-34 151.0 105 72.4
C07p38490 Brassica napus HOM05D002776 ORTHO05D011320 2.4e-34 150.6 105 71.4
BcaC05g27518 Brassica carinata HOM05D002776 ORTHO05D000395 4.1e-34 149.8 105 72.4
C05p34920 Brassica napus HOM05D002776 ORTHO05D011320 4.1e-34 149.8 105 72.4
BcaC08g44059 Brassica carinata HOM05D002776 ORTHO05D011320 5.4e-34 149.4 105 71.4
C03p44570 Brassica napus HOM05D002776 ORTHO05D011320 5.4e-34 149.4 105 71.4
C04p56090 Brassica napus HOM05D002776 ORTHO05D003044 3.5e-33 146.7 427 30.2
BolC5t32217H Brassica oleracea HOM05D002776 ORTHO05D011320 4.6e-33 146.4 105 71.4
BraA09t40150Z Brassica rapa HOM05D002776 ORTHO05D011320 4.6e-33 146.4 112 67.0
BraA07t28346Z Brassica rapa HOM05D002776 ORTHO05D000395 6.0e-33 146.0 216 45.8
BolC3t17909H Brassica oleracea HOM05D002776 ORTHO05D003044 7.8e-33 145.6 112 67.0
C09p16540 Brassica napus HOM05D002776 ORTHO05D011320 1.0e-32 145.2 105 70.5
BraA03t15291Z Brassica rapa HOM05D002776 ORTHO05D000395 3.9e-32 143.3 112 66.1
C04p36700 Brassica napus HOM05D002776 ORTHO05D011320 6.6e-32 142.5 103 68.0
BcaC09g50108 Brassica carinata HOM05D002776 ORTHO05D011320 1.5e-31 141.4 105 69.5
A08p06070 Brassica napus HOM05D002776 ORTHO05D011320 1.9e-31 141.0 105 70.5
BolC3t18858H Brassica oleracea HOM05D002776 ORTHO05D000395 4.3e-31 139.8 105 66.7
BcaC02g09778 Brassica carinata HOM05D002776 ORTHO05D011320 5.6e-31 139.4 96 71.9
BcaC05g25874 Brassica carinata HOM05D002776 ORTHO05D003044 7.3e-31 139.0 273 37.0
BcaC08g43735 Brassica carinata HOM05D002776 ORTHO05D003044 2.1e-30 137.5 73 86.3
BcaB03g16806 Brassica carinata HOM05D002776 ORTHO05D003044 2.8e-30 137.1 458 31.4
BcaC04g22429 Brassica carinata HOM05D002776 ORTHO05D011320 8.9e-29 132.1 97 70.1
C03p56220 Brassica napus HOM05D001224 ORTHO05D003542 1.3e-27 128.3 227 39.6
C04p41830 Brassica napus HOM05D002776 ORTHO05D000395 3.8e-27 126.7 58 98.3
BcaC01g03923 Brassica carinata HOM05D002776 ORTHO05D003542 1.4e-26 124.8 88 71.6
BcaC01g02374 Brassica carinata HOM05D002776 ORTHO05D003044 9.2e-26 122.1 452 30.3
C03p56210 Brassica napus HOM05D002776 ORTHO05D003044 1.6e-25 121.3 104 62.5
BcaB01g01307 Brassica carinata HOM05D002776 ORTHO05D003044 6.0e-25 119.4 502 27.9
C05p44740 Brassica napus HOM05D002776 ORTHO05D003044 1.1e-23 115.2 393 29.5
BcaB01g01630 Brassica carinata HOM05D002776 ORTHO05D011320 1.5e-23 114.8 73 76.7
BcaB03g16296 Brassica carinata HOM05D002776 ORTHO05D000395 2.5e-23 114.0 65 81.5
BcaC03g14316 Brassica carinata HOM05D002776 ORTHO05D011320 3.3e-23 113.6 52 98.1
BcaB05g23078 Brassica carinata HOM05D002776 ORTHO05D011320 4.3e-23 113.2 73 75.3
BcaB05g23247 Brassica carinata HOM05D002776 ORTHO05D011320 6.2e-22 109.4 73 74.0
BcaB01g03188 Brassica carinata HOM05D002776 ORTHO05D003044 8.1e-22 109.0 73 72.6
BraA09t38882Z Brassica rapa HOM05D001224 ORTHO05D003542 1.4e-21 108.2 100 63.0
BcaB01g01817 Brassica carinata HOM05D002776 ORTHO05D003044 2.4e-21 107.5 61 83.6
BcaB06g26729 Brassica carinata HOM05D002776 ORTHO05D000395 6.9e-21 105.9 99 59.6
BolC9t55017H Brassica oleracea HOM05D002776 ORTHO05D003044 2.6e-20 104.0 264 34.8
BcaB05g22944 Brassica carinata HOM05D002776 ORTHO05D000395 2.9e-19 100.5 193 40.4
BolC2t11289H Brassica oleracea HOM05D002776 ORTHO05D003044 3.8e-19 100.1 426 26.5
C07p38500 Brassica napus HOM05D001224 ORTHO05D003542 2.4e-18 97.4 100 59.0
C04p41840 Brassica napus HOM05D002776 ORTHO05D003044 1.2e-17 95.1 252 33.7
BcaC05g25873 Brassica carinata HOM05D001224 ORTHO05D003542 1.6e-17 94.7 103 53.4
BcaC05g26787 Brassica carinata HOM05D002776 ORTHO05D011320 2.1e-17 94.4 55 81.8
C09p21160 Brassica napus HOM05D001224 ORTHO05D003542 2.7e-17 94.0 136 46.3
BolC9t55018H Brassica oleracea HOM05D001224 ORTHO05D003542 2.7e-17 94.0 136 46.3
BraA10t42919Z Brassica rapa HOM05D001224 ORTHO05D003542 2.7e-17 94.0 106 53.8
A01p28530 Brassica napus HOM05D002776 ORTHO05D003044 4.6e-17 93.2 438 26.5
BcaB06g27856 Brassica carinata HOM05D002776 ORTHO05D003044 6.0e-17 92.8 193 37.8
A03p54410 Brassica napus HOM05D001224 ORTHO05D003542 6.0e-17 92.8 106 53.8
C05p34940 Brassica napus HOM05D001224 ORTHO05D003542 7.8e-17 92.4 89 59.6
C07p49100 Brassica napus HOM05D001224 ORTHO05D003542 7.8e-17 92.4 89 59.6
C09p16570 Brassica napus HOM05D001224 ORTHO05D003542 7.8e-17 92.4 89 59.6
BolC6t36240H Brassica oleracea HOM05D001224 ORTHO05D003542 7.8e-17 92.4 107 53.3
A01p20520 Brassica napus HOM05D001224 ORTHO05D003542 1.0e-16 92.0 106 53.8
A03p65930 Brassica napus HOM05D001224 ORTHO05D003542 1.0e-16 92.0 106 53.8
BraA07t28348Z Brassica rapa HOM05D001224 ORTHO05D003542 1.0e-16 92.0 106 53.8
BcaB01g02123 Brassica carinata HOM05D002776 ORTHO05D094509 1.3e-16 91.7 52 84.6
C03p75870 Brassica napus HOM05D001224 ORTHO05D003542 1.3e-16 91.7 120 49.2
C09p19450 Brassica napus HOM05D001224 ORTHO05D003542 1.3e-16 91.7 89 58.4
BcaC02g09113 Brassica carinata HOM05D001224 ORTHO05D003542 3.0e-16 90.5 89 58.4
BcaC09g48966 Brassica carinata HOM05D001224 ORTHO05D003542 3.0e-16 90.5 89 58.4
C01p30530 Brassica napus HOM05D001224 ORTHO05D003542 3.0e-16 90.5 89 58.4
C01p44930 Brassica napus HOM05D001224 ORTHO05D003542 3.0e-16 90.5 89 58.4
C02p53510 Brassica napus HOM05D001224 ORTHO05D003542 3.0e-16 90.5 89 58.4
C03p65990 Brassica napus HOM05D001224 ORTHO05D003542 3.0e-16 90.5 89 58.4
C04p41850 Brassica napus HOM05D001224 ORTHO05D003542 3.0e-16 90.5 89 58.4
C08p06680 Brassica napus HOM05D001224 ORTHO05D003542 3.0e-16 90.5 89 58.4
BolC3t18859H Brassica oleracea HOM05D001224 ORTHO05D003542 3.0e-16 90.5 89 58.4
BolC6t36735H Brassica oleracea HOM05D001224 ORTHO05D003542 3.0e-16 90.5 89 58.4
BolC9t57316H Brassica oleracea HOM05D001224 ORTHO05D003542 3.0e-16 90.5 89 58.4
BraA01t03049Z Brassica rapa HOM05D001224 ORTHO05D003542 3.0e-16 90.5 89 57.3
BraA03t14506Z Brassica rapa HOM05D001224 ORTHO05D003542 3.0e-16 90.5 89 58.4
C08p08880 Brassica napus HOM05D001224 ORTHO05D003542 3.9e-16 90.1 103 52.4
A07p02040 Brassica napus HOM05D001224 ORTHO05D003542 5.1e-16 89.7 106 52.8
C01p38690 Brassica napus HOM05D001224 ORTHO05D003542 5.1e-16 89.7 106 52.8
A09p33390 Brassica napus HOM05D001224 ORTHO05D003542 6.6e-16 89.4 106 52.8
C08p06670 Brassica napus HOM05D002776 ORTHO05D003044 1.1e-15 88.6 146 44.5
BolC3t19483H Brassica oleracea HOM05D001224 ORTHO05D003542 1.1e-15 88.6 89 57.3
BcaB02g11313 Brassica carinata HOM05D002776 ORTHO05D000395 1.9e-15 87.8 51 80.4
A08p09950 Brassica napus HOM05D001224 ORTHO05D003542 1.9e-15 87.8 106 52.8
BraA08t32989Z Brassica rapa HOM05D001224 ORTHO05D003542 1.9e-15 87.8 106 52.8
BcaB01g01308 Brassica carinata HOM05D001224 ORTHO05D003542 2.5e-15 87.4 89 57.3
C07p30720 Brassica napus HOM05D001224 ORTHO05D003542 2.5e-15 87.4 89 56.2
BcaB03g16496 Brassica carinata HOM05D001224 ORTHO05D003542 3.3e-15 87.0 89 57.3
BcaC08g43734 Brassica carinata HOM05D001224 ORTHO05D003542 3.3e-15 87.0 90 52.2
BcaC08g44057 Brassica carinata HOM05D001224 ORTHO05D003542 4.3e-15 86.7 88 56.8
C05p44750 Brassica napus HOM05D001224 ORTHO05D003542 4.3e-15 86.7 89 56.2
C07p01240 Brassica napus HOM05D001224 ORTHO05D003542 2.1e-14 84.3 89 53.9
C03p44580 Brassica napus HOM05D002776 ORTHO05D003044 6.2e-14 82.8 217 31.8
BolC4t25127H Brassica oleracea HOM05D002776 ORTHO05D003044 1.1e-13 82.0 137 42.3
BcaC07g39107 Brassica carinata HOM05D001224 ORTHO05D003542 3.1e-13 80.5 85 56.5
BcaC02g08297 Brassica carinata HOM05D002776 ORTHO05D003044 5.3e-13 79.7 196 32.1
BcaB03g16196 Brassica carinata HOM05D002776 ORTHO05D092087 1.2e-12 78.6 47 78.7
BcaC01g02507 Brassica carinata HOM05D002776 ORTHO05D003044 1.5e-12 78.2 42 83.3
BraA08t32988Z Brassica rapa HOM05D002776 ORTHO05D003044 1.5e-12 78.2 142 37.3
C09p27480 Brassica napus HOM05D001224 ORTHO05D003542 2.0e-12 77.8 82 56.1
BolC7t43617H Brassica oleracea HOM05D001224 ORTHO05D003542 5.8e-12 76.3 89 53.9
BolC7t45417H Brassica oleracea HOM05D001224 ORTHO05D003542 5.8e-12 76.3 46 80.4
BcaC02g09777 Brassica carinata HOM05D001224 ORTHO05D003542 9.9e-12 75.5 45 82.2
C04p56100 Brassica napus HOM05D001224 ORTHO05D003542 9.9e-12 75.5 45 82.2
BcaC08g44372 Brassica carinata HOM05D001224 ORTHO05D003542 1.7e-11 74.7 88 51.1
A09p33400 Brassica napus HOM05D002776 ORTHO05D003044 1.7e-11 74.7 142 36.6
BraA09t38883Z Brassica rapa HOM05D002776 ORTHO05D003044 1.7e-11 74.7 142 36.6
BolC4t25126H Brassica oleracea HOM05D001224 ORTHO05D003542 2.2e-11 74.3 45 80.0
BraA01t01978Z Brassica rapa HOM05D002776 ORTHO05D003044 4.9e-11 73.2 71 53.5
BolC3t17910H Brassica oleracea HOM05D001224 ORTHO05D003542 8.4e-11 72.4 99 47.5
BcaB04g17427 Brassica carinata HOM05D001224 ORTHO05D003542 1.9e-10 71.2 85 49.4
BolC3t18910H Brassica oleracea HOM05D001224 ORTHO05D003542 1.9e-10 71.2 92 46.7
BcaB04g18312 Brassica carinata HOM05D002776 ORTHO05D003044 2.4e-10 70.9 143 35.0
BraA01t03051Z Brassica rapa HOM05D002776 ORTHO05D003044 2.4e-10 70.9 90 46.7
C01p38700 Brassica napus HOM05D002776 ORTHO05D003044 3.2e-10 70.5 41 82.9
A01p20500 Brassica napus HOM05D002776 ORTHO05D003044 4.2e-10 70.1 64 57.8
BcaC08g44058 Brassica carinata HOM05D002776 ORTHO05D090300 5.4e-10 69.7 31 90.3
C07p01230 Brassica napus HOM05D002776 ORTHO05D003044 7.1e-10 69.3 53 66.0
BcaB07g33314 Brassica carinata HOM05D002776 ORTHO05D003044 2.1e-09 67.8 136 34.6
BcaB02g11226 Brassica carinata HOM05D002776 ORTHO05D003044 2.7e-09 67.4 98 45.9
C07p30710 Brassica napus HOM05D002776 ORTHO05D042973 2.7e-09 67.4 64 56.2
BcaB04g17677 Brassica carinata HOM05D002776 ORTHO05D003044 3.5e-09 67.0 136 34.6
BcaB06g26726 Brassica carinata HOM05D001224 ORTHO05D003542 4.6e-09 66.6 87 44.8
A08p08130 Brassica napus HOM05D002776 ORTHO05D003044 4.6e-09 66.6 64 56.2
BcaB06g27272 Brassica carinata HOM05D001224 ORTHO05D003542 7.9e-09 65.9 86 45.3
BraA03t14508Z Brassica rapa HOM05D002776 ORTHO05D107841 7.9e-09 65.9 62 56.5
C02p52030 Brassica napus HOM05D002776 ORTHO05D003044 1.8e-08 64.7 41 75.6
BcaB07g33216 Brassica carinata HOM05D001224 ORTHO05D003542 2.3e-08 64.3 87 43.7
BolC6t38483H Brassica oleracea HOM05D001224 ORTHO05D003542 1.5e-07 61.6 87 42.5
BolC7t45415H Brassica oleracea HOM05D002776 ORTHO05D028158 1.5e-07 61.6 59 61.0
BraA07t28368Z Brassica rapa HOM05D001224 ORTHO05D003542 1.9e-07 61.2 73 49.3
C09p21150 Brassica napus HOM05D002776 ORTHO05D003044 2.5e-07 60.8 121 33.1
BolC9t59177H Brassica oleracea HOM05D001224 ORTHO05D003542 2.5e-07 60.8 73 46.6
BcaB07g33940 Brassica carinata HOM05D001224 ORTHO05D003542 3.3e-07 60.5 88 42.0
C09p28500 Brassica napus HOM05D002776 ORTHO05D028158 4.3e-07 60.1 30 90.0
BolC3t18709H Brassica oleracea HOM05D002776 ORTHO05D028158 4.3e-07 60.1 30 90.0
BcaC01g03079 Brassica carinata HOM05D001224 ORTHO05D003542 7.4e-07 59.3 55 56.4
BcaC02g08298 Brassica carinata HOM05D001224 ORTHO05D003542 7.4e-07 59.3 34 79.4
C07p12000 Brassica napus HOM05D001224 ORTHO05D003542 7.4e-07 59.3 73 47.9
BolC5t33263H Brassica oleracea HOM05D001224 ORTHO05D003542 1.3e-06 58.5 73 47.9
C06p05150 Brassica napus HOM05D001224 ORTHO05D003542 1.6e-06 58.2 87 41.4
C03p58290 Brassica napus HOM05D001224 ORTHO05D003542 2.1e-06 57.8 73 46.6
C04p05510 Brassica napus HOM05D001224 ORTHO05D003542 2.1e-06 57.8 73 46.6
C07p00680 Brassica napus HOM05D001224 ORTHO05D003542 2.1e-06 57.8 73 46.6
C04p09860 Brassica napus HOM05D001224 ORTHO05D003542 3.7e-06 57.0 86 38.4
C04p55400 Brassica napus HOM05D001224 ORTHO05D003542 3.7e-06 57.0 75 48.0
C05p34930 Brassica napus HOM05D002776 ORTHO05D003044 3.7e-06 57.0 132 31.1
BolC4t22594H Brassica oleracea HOM05D001224 ORTHO05D003542 3.7e-06 57.0 86 38.4
BraA08t32834Z Brassica rapa HOM05D002776 ORTHO05D028158 3.7e-06 57.0 34 85.3
BolC4t26386H Brassica oleracea HOM05D001224 ORTHO05D003542 4.8e-06 56.6 73 46.6
BcaB04g18313 Brassica carinata HOM05D001224 ORTHO05D003542 6.2e-06 56.2 83 44.6
BolC4t23824H Brassica oleracea HOM05D001224 ORTHO05D003542 6.2e-06 56.2 86 40.7
C01p30570 Brassica napus HOM05D001224 ORTHO05D003542 8.1e-06 55.8 37 75.7


User provided reference genes

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