Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g33576 Brassica carinata HOM05D008271 ORTHO05D010809 4.2e-52 207.6 96 100.0
BcaC06g33578 Brassica carinata HOM05D008271 ORTHO05D010809 1.2e-51 206.1 96 99.0
C07p49000 Brassica napus HOM05D008271 ORTHO05D010809 1.2e-51 206.1 96 99.0
BolC7t45408H Brassica oleracea HOM05D008271 ORTHO05D010809 1.2e-51 206.1 96 99.0
C07p48970 Brassica napus HOM05D008271 ORTHO05D010809 3.6e-51 204.5 96 99.0
C07p48980 Brassica napus HOM05D008271 ORTHO05D010809 3.6e-51 204.5 96 99.0
BolC7t45405H Brassica oleracea HOM05D008271 ORTHO05D010809 3.6e-51 204.5 96 99.0
BolC7t45407H Brassica oleracea HOM05D008271 ORTHO05D010809 1.8e-50 202.2 96 97.9
BcaC06g33577 Brassica carinata HOM05D008271 ORTHO05D010809 1.2e-49 199.5 96 97.9
BolC7t45406H Brassica oleracea HOM05D008271 ORTHO05D010809 5.7e-49 197.2 97 96.9
A03p50630 Brassica napus HOM05D008271 ORTHO05D010809 5.4e-47 190.7 96 91.7
BraA03t14155Z Brassica rapa HOM05D008271 ORTHO05D010809 5.4e-47 190.7 96 91.7
BcaNung04039 Brassica carinata HOM05D008271 ORTHO05D010809 2.3e-37 158.7 98 75.5
BcaB04g17694 Brassica carinata HOM05D008271 ORTHO05D010809 4.0e-34 147.9 102 69.6
BraA03t14157Z Brassica rapa HOM05D008271 ORTHO05D010809 5.2e-34 147.5 102 69.6
Sp7g16400 Schrenkiella parvula HOM05D008271 ORTHO05D010809 1.5e-33 146.0 102 68.6
Sp7g16410 Schrenkiella parvula HOM05D008271 ORTHO05D010809 2.0e-33 145.6 102 68.6
A03p50650 Brassica napus HOM05D008271 ORTHO05D010809 2.6e-33 145.2 102 68.6
C07p49020 Brassica napus HOM05D008271 ORTHO05D010809 8.3e-32 140.2 102 65.7
BolC7t45411H Brassica oleracea HOM05D008271 ORTHO05D010809 8.3e-32 140.2 102 65.7
AL7G36860 Arabidopsis lyrata HOM05D008271 ORTHO05D010809 7.0e-31 137.1 102 66.7
AT4G17718 Arabidopsis thaliana HOM05D008271 ORTHO05D010809 3.3e-28 128.3 102 61.8
Sp7g16420 Schrenkiella parvula HOM05D008271 ORTHO05D010809 1.4e-26 122.9 96 62.5
A06p19450 Brassica napus HOM05D008271 ORTHO05D010809 2.3e-26 122.1 95 61.1
Thhalv10027032m.g Eutrema salsugineum HOM05D008271 ORTHO05D010809 3.1e-26 121.7 96 59.4
BraA06t25024Z Brassica rapa HOM05D008271 ORTHO05D010809 6.8e-26 120.6 95 61.1
BraA06t27067Z Brassica rapa HOM05D008271 ORTHO05D010809 8.9e-26 120.2 95 61.1
BolC8t48473H Brassica oleracea HOM05D008271 ORTHO05D010809 2.6e-25 118.6 95 60.0
BolC8t48475H Brassica oleracea HOM05D008271 ORTHO05D010809 2.6e-25 118.6 95 60.0
BcaB06g28583 Brassica carinata HOM05D008271 ORTHO05D024079 9.8e-25 116.7 104 54.8
C07p49040 Brassica napus HOM05D008271 ORTHO05D010809 9.8e-25 116.7 74 68.9
BcaC07g38069 Brassica carinata HOM05D008271 ORTHO05D010809 1.3e-24 116.3 95 58.9
BraA06t25023Z Brassica rapa HOM05D008271 ORTHO05D010809 1.7e-24 115.9 95 60.0
A06p19440 Brassica napus HOM05D008271 ORTHO05D010809 2.2e-24 115.5 95 60.0
BraA03t14154Z Brassica rapa HOM05D008271 ORTHO05D010809 2.7e-22 108.6 89 61.8
AT4G17713 Arabidopsis thaliana HOM05D008271 ORTHO05D010809 6.6e-21 104.0 100 51.0
Carub.0007s2365 Capsella rubella HOM05D008271 ORTHO05D010809 3.3e-20 101.7 107 54.2
Aa31LG6G460 Aethionema arabicum HOM05D008271 ORTHO05D010809 1.6e-19 99.4 76 55.3
C07p48960 Brassica napus HOM05D008271 ORTHO05D032231 4.7e-19 97.8 84 60.7
BolC7t45404H Brassica oleracea HOM05D008271 ORTHO05D032231 4.7e-19 97.8 84 60.7
C01p11410 Brassica napus HOM05D008271 ORTHO05D024079 1.8e-18 95.9 81 54.3
AT2G06166 Arabidopsis thaliana HOM05D008271 ORTHO05D010809 5.2e-18 94.4 91 53.8
BraA01t00922Z Brassica rapa HOM05D008271 ORTHO05D024079 5.2e-18 94.4 81 51.9
BcaC09g51616 Brassica carinata HOM05D008271 ORTHO05D024079 3.4e-17 91.7 81 53.1
CARHR181630 Cardamine hirsuta HOM05D008271 ORTHO05D010809 4.1e-15 84.7 96 43.8
BcaC06g33575 Brassica carinata HOM05D008271 ORTHO05D032231 1.6e-14 82.8 66 63.6
Carub.0007s2366 Capsella rubella HOM05D008271 ORTHO05D010809 3.0e-13 78.6 101 43.6
Carub.0005s0726 Capsella rubella HOM05D008271 ORTHO05D010809 5.1e-13 77.8 101 42.6
BcaC06g33584 Brassica carinata HOM05D008271 ORTHO05D010809 1.1e-12 76.6 43 72.1
Thhalv10023877m.g Eutrema salsugineum HOM05D008271 ORTHO05D010809 2.1e-11 72.4 100 41.0
Thhalv10026758m.g Eutrema salsugineum HOM05D008271 ORTHO05D010809 2.8e-11 72.0 97 45.4
BraA03t14193Z Brassica rapa HOM05D008271 ORTHO05D024545 1.8e-10 69.3 99 41.4
C09p18390 Brassica napus HOM05D008271 ORTHO05D010809 4.0e-10 68.2 98 43.9
A09p15200 Brassica napus HOM05D008271 ORTHO05D010809 5.2e-10 67.8 98 43.9
A03p51060 Brassica napus HOM05D008271 ORTHO05D024545 8.9e-10 67.0 101 42.6
A03p50640 Brassica napus HOM05D000742 ORTHO05D000924 2.0e-09 65.9 78 43.6
BraA03t14156Z Brassica rapa HOM05D000742 ORTHO05D000924 2.0e-09 65.9 78 43.6
CARHR264030 Cardamine hirsuta HOM05D008271 ORTHO05D010809 1.3e-08 63.2 79 39.2
Thhalv10002741m.g Eutrema salsugineum HOM05D008271 ORTHO05D024545 1.7e-08 62.8 98 41.8
C07p49490 Brassica napus HOM05D008271 ORTHO05D024545 6.4e-08 60.8 101 41.6
Sp7g16000 Schrenkiella parvula HOM05D008271 ORTHO05D024545 6.4e-08 60.8 97 40.2


User provided reference genes

Program Settings